RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 OCR1Q9BZK8 76 aa8.86□□□□□ -0.99
ACTN1-204ENST00000438964 HECTD1Q9ULT8 2610 aa8.86□□□□□ -0.99
ACTN1-204ENST00000438964 A0A0J9YWU9 116 aa8.86□□□□□ -0.99
ACTN1-204ENST00000438964 PSPHP1O15172 72 aa8.86□□□□□ -0.99
ACTN1-204ENST00000438964 IGHV4-30-4P0DP06 118 aa8.86□□□□□ -0.99
ACTN1-204ENST00000438964 Q6ZRU5 148 aa8.86□□□□□ -0.99
ACTN1-204ENST00000438964 FBN1P35555 2871 aaKnown RBP8.85□□□□□ -0.99
ACTN1-204ENST00000438964 NDUFC1O43677 76 aa8.84□□□□□ -0.99
ACTN1-204ENST00000438964 BCE1O60756 84 aa8.84□□□□□ -0.99
ACTN1-204ENST00000438964 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
ACTN1-204ENST00000438964 VPREB1P12018 145 aa8.84□□□□□ -0.99
ACTN1-204ENST00000438964 CMC4P56277 68 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-204ENST00000438964 ESRGQ1W209 222 aa8.84□□□□□ -0.99
ACTN1-204ENST00000438964 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
ACTN1-204ENST00000438964 KRTAP1-3Q8IUG1 177 aa8.84□□□□□ -0.99
ACTN1-204ENST00000438964 WFDC10BQ8IUB3 73 aa8.83□□□□□ -1
ACTN1-204ENST00000438964 Q6ZTC4 211 aa8.83□□□□□ -1
ACTN1-204ENST00000438964 KRTAP10-3P60369 221 aa8.82□□□□□ -1
ACTN1-204ENST00000438964 SMR3AQ99954 134 aa8.82□□□□□ -1
ACTN1-204ENST00000438964 FLNBO75369 2602 aaKnown RBP8.82□□□□□ -1
ACTN1-204ENST00000438964 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
ACTN1-204ENST00000438964 Q6ZRP5 223 aa8.8□□□□□ -1
ACTN1-204ENST00000438964 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
ACTN1-204ENST00000438964 A8MU10 97 aa8.79□□□□□ -1
ACTN1-204ENST00000438964 NOTCH1P46531 2555 aa8.79□□□□□ -1
ACTN1-204ENST00000438964 MAST4O15021 2626 aa8.79□□□□□ -1
ACTN1-204ENST00000438964 LELP1Q5T871 98 aa8.78□□□□□ -1
ACTN1-204ENST00000438964 Q8N377 158 aa8.78□□□□□ -1
ACTN1-204ENST00000438964 SERTAD4-AS1Q5TG53 156 aa8.77□□□□□ -1.01
ACTN1-204ENST00000438964 M0R378 163 aa8.77□□□□□ -1.01
ACTN1-204ENST00000438964 C1orf64Q8NEQ6 169 aa8.77□□□□□ -1.01
ACTN1-204ENST00000438964 V9GYY9 64 aa8.77□□□□□ -1.01
ACTN1-204ENST00000438964 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
ACTN1-204ENST00000438964 LYRM9A8MSI8 78 aa8.76□□□□□ -1.01
ACTN1-204ENST00000438964 KPRPQ5T749 579 aaPredicted RBP8.76□□□□□ -1.01
ACTN1-204ENST00000438964 PRR34Q9NV39 138 aa8.76□□□□□ -1.01
ACTN1-204ENST00000438964 COL6A5A8TX70 2615 aa8.76□□□□□ -1.01
ACTN1-204ENST00000438964 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-204ENST00000438964 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
ACTN1-204ENST00000438964 K7EQZ3 153 aa8.75□□□□□ -1.01
ACTN1-204ENST00000438964 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
ACTN1-204ENST00000438964 RETNQ9HD89 108 aa8.74□□□□□ -1.01
ACTN1-204ENST00000438964 C15orf56Q8N910 161 aa8.73□□□□□ -1.01
ACTN1-204ENST00000438964 COL7A1Q02388 2944 aa8.73□□□□□ -1.01
ACTN1-204ENST00000438964 SEC61GP60059 68 aa8.73□□□□□ -1.01
ACTN1-204ENST00000438964 NKAPP1Q8N9T2 125 aa8.73□□□□□ -1.01
ACTN1-204ENST00000438964 ANK2Q01484 3957 aa8.73□□□□□ -1.01
ACTN1-204ENST00000438964 Q8NAQ8 132 aa8.72□□□□□ -1.01
ACTN1-204ENST00000438964 WFDC13Q8IUB5 93 aa8.72□□□□□ -1.01
ACTN1-204ENST00000438964 C7orf33Q8WU49 177 aa8.72□□□□□ -1.01
ACTN1-204ENST00000438964 GVQW2A0A096LPI5 108 aaPredicted RBP8.71□□□□□ -1.01
ACTN1-204ENST00000438964 hDV103S1A0JD37 113 aa8.71□□□□□ -1.01
ACTN1-204ENST00000438964 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
ACTN1-204ENST00000438964 SPART-AS1P0CW21 52 aa8.7□□□□□ -1.02
ACTN1-204ENST00000438964 NBEAL1Q6ZS30 2694 aa8.7□□□□□ -1.02
ACTN1-204ENST00000438964 ERC2-IT1O76042 136 aa8.7□□□□□ -1.02
ACTN1-204ENST00000438964 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-204ENST00000438964 Q9BRP9 147 aa8.69□□□□□ -1.02
ACTN1-204ENST00000438964 EGFEM1PQ0D2K5 195 aa8.69□□□□□ -1.02
ACTN1-204ENST00000438964 KRTAP1-1Q07627 177 aa8.68□□□□□ -1.02
ACTN1-204ENST00000438964 NSD1Q96L73 2696 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-204ENST00000438964 H3BQ85 93 aa8.68□□□□□ -1.02
ACTN1-204ENST00000438964 DSCR10P59022 87 aa8.68□□□□□ -1.02
ACTN1-204ENST00000438964 A8MUN3 132 aa8.67□□□□□ -1.02
ACTN1-204ENST00000438964 STAB1Q9NY15 2570 aa8.67□□□□□ -1.02
ACTN1-204ENST00000438964 F8WDY8 70 aa8.67□□□□□ -1.02
ACTN1-204ENST00000438964 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
ACTN1-204ENST00000438964 TRAV22A0A0B4J277 110 aa8.66□□□□□ -1.02
ACTN1-204ENST00000438964 KRTAP26-1Q6PEX3 210 aa8.65□□□□□ -1.02
ACTN1-204ENST00000438964 UBE2BP63146 152 aa8.64□□□□□ -1.03
ACTN1-204ENST00000438964 SYCNQ0VAF6 134 aa8.64□□□□□ -1.03
ACTN1-204ENST00000438964 APOC4P55056 127 aa8.64□□□□□ -1.03
ACTN1-204ENST00000438964 CASC10Q5T4H9 136 aa8.64□□□□□ -1.03
ACTN1-204ENST00000438964 ETDCA0A1B0GVM5 59 aa8.63□□□□□ -1.03
ACTN1-204ENST00000438964 IGLV5-48A0A075B6I7 105 aa8.62□□□□□ -1.03
ACTN1-204ENST00000438964 Q6ZRX8 168 aa8.61□□□□□ -1.03
ACTN1-204ENST00000438964 Q8NBF4 154 aa8.61□□□□□ -1.03
ACTN1-204ENST00000438964 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
ACTN1-204ENST00000438964 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
ACTN1-204ENST00000438964 PSCAO43653 123 aa8.6□□□□□ -1.03
ACTN1-204ENST00000438964 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
ACTN1-204ENST00000438964 LYSTQ99698 3801 aa8.59□□□□□ -1.03
ACTN1-204ENST00000438964 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
ACTN1-204ENST00000438964 A0A096LNI7 61 aa8.58□□□□□ -1.04
ACTN1-204ENST00000438964 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
ACTN1-204ENST00000438964 ZCCHC13Q8WW36 166 aaKnown RBP8.57□□□□□ -1.04
ACTN1-204ENST00000438964 A0A087WSZ3 146 aa8.57□□□□□ -1.04
ACTN1-204ENST00000438964 KRTAP7-1Q8IUC3 87 aa8.57□□□□□ -1.04
ACTN1-204ENST00000438964 PRLHP81277 87 aa8.56□□□□□ -1.04
ACTN1-204ENST00000438964 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
ACTN1-204ENST00000438964 LINC00476Q8WZB0 136 aa8.56□□□□□ -1.04
ACTN1-204ENST00000438964 DNAH10Q8IVF4 4471 aa8.56□□□□□ -1.04
ACTN1-204ENST00000438964 Q1T7F1 81 aa8.56□□□□□ -1.04
ACTN1-204ENST00000438964 TNP2Q05952 138 aa8.55□□□□□ -1.04
ACTN1-204ENST00000438964 PRR15Q8IV56 129 aa8.55□□□□□ -1.04
ACTN1-204ENST00000438964 OXLD1Q5BKU9 147 aa8.54□□□□□ -1.04
ACTN1-204ENST00000438964 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
ACTN1-204ENST00000438964 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
ACTN1-204ENST00000438964 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
ACTN1-204ENST00000438964 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms