RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ODF3Q96PU9 254 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 TMEM191AQ9H0A3 160 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 PLAC8Q9NZF1 115 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 RABAC1Q9UI14 185 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 PSORS1C2Q9UIG4 136 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 LINC00588Q9Y4M8 146 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 PHLDA3Q9Y5J5 127 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGKV2-24A0A0C4DH68 120 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRBV7-6A0A0J9YX20 115 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 OR2T8A6NH00 312 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 LINC01549A6NIU2 74 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 C2orf70A6NJV1 201 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 G3V318 75 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 K7EMI3 77 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 M0R3E3 92 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 TAX1BP3O14907 124 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 PPP1R17O96001 155 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRGV3P03979 118 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 MGST1P10620 155 aaKnown RBP1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 FABP4P15090 132 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 HTN3P15516 51 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 PSMB8P28062 276 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 PMCHL1Q16048 86 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 TDRG1Q3Y452 100 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q56UQ5 140 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q5XG85 94 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 AMMECR1LQ6DCA0 310 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 BAGE3Q86Y29 109 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 DAND5Q8N907 189 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 OR10AG1Q8NH19 301 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 SMCR5Q8TEV8 140 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 ZC2HC1AQ96GY0 325 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 VPS25Q9BRG1 176 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 MIEN1Q9BRT3 115 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 UPK3BQ9BT76 320 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 FAM103A1Q9BTL3 118 aaKnown RBP1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 AGPAT4-IT1Q9H0P7 198 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 ST20Q9HBF5 79 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 ERG28Q9UKR5 140 aa1.06□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRAV21A0A0B4J279 112 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGHV1-58A0A0C4DH39 117 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRBV6-5A0A0K0K1A5 114 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 A8MWP4 228 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 H3BMM0 161 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 SYS1-DBNDD2H3BUS1 97 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 K7ERU9 68 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 M0R2Z0 102 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 LECT2O14960 151 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 SLC25A20O43772 301 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 ZNF73O43830 326 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 DPM2O94777 84 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 NCR2O95944 276 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 NPYP01303 97 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGHV3-53P01767 116 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 ARMS2P0C7Q2 107 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 C3orf79P0CE67 100 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 APELAP0DMC3 54 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 FCER1GP30273 86 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 MIAQ16674 131 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 KRTAP13-4Q3LI77 160 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 LINC01554Q52M75 96 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 LINC01545Q5VT33 79 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 MRPL54Q6P161 138 aaKnown RBP1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 LYZL1Q6UWQ5 148 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q6ZQT7 251 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q8N814 137 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q8N8P6 123 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 C1orf64Q8NEQ6 169 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 DCANP1Q8TF63 244 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 UBE2WQ96B02 151 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 C14orf144Q96I85 54 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 PMCHL2Q9BQD1 86 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 C20orf78Q9BR46 151 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 LINC00467Q9BRT7 94 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 PRADC1Q9BSG0 188 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 RHPN1-AS1Q9BWJ2 59 aa1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 NXT2Q9NPJ8 142 aaKnown RBP1.05□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGKV2-40A0A087WW87 121 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGHV3-73A0A0B4J1V6 119 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGHV1-24A0A0C4DH33 117 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 A0A0J9YX75 114 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRBV27A0A0K0K1C4 114 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 ZNF705FA8MVS1 300 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 D6R8Y8 96 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 H3BMG7 143 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 J3QQQ9 107 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 J3QR89 54 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 M0R143 59 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 LEPROTO15243 131 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 SPINK4O60575 86 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 LEPROTL1O95214 131 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGKV2D-40P01614 121 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 ZNF705BP0CI00 300 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGLC3P0DOY3 106 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 RNASE3P12724 160 aaKnown RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 HLA-DRB4P13762 266 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 S100A4P26447 101 aaKnown RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 CKS2P33552 79 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms