RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LINC00588Q9Y4M8 146 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV1D-8A0A087WSZ0 117 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRAV13-2A0A0B4J235 113 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGHV3OR16-9A0A0B4J2B5 98 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV1-6A0A0C4DH72 117 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 IBA57-AS1B1ANH7 110 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV1-5P01602 117 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 ATP5EP2Q5VTU8 51 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 PHF5AQ7RTV0 110 aaKnown RBP2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 DAND5Q8N907 189 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 PSENENQ9NZ42 101 aa2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 MRPL35Q9NZE8 188 aaKnown RBP2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 ZNF706Q9Y5V0 76 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV3OR16-8A0A075B7F1 116 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV3-49A0A0A0MS15 119 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGKV1D-13A0A0B4J2D9 117 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 LOC100131303A0A0U1RQF7 123 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 TMEM14DPA8MWL7 114 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 H7BZZ5 65 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 CTSGP08311 255 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGKV1-13P0DP09 117 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 HTN3P15516 51 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 NPPCP23582 126 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 PLNP26678 52 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 LINC00313P59037 77 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 SFTA2Q6UW10 78 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 CLEC2BQ92478 149 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 LINC00474Q9P2X8 69 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 HMCN2Q8NDA2 5059 aa2.77□□□□□ -1.97
HMGB3P5-201ENST00000428894 TRAV7A0A075B6U4 112 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV3OR16-13A0A075B7E8 117 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV3-74A0A0B4J1X5 117 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 F8WEM9 126 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 PSPHP1O15172 72 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 DNAL4O96015 105 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 SMR3BP02814 79 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 KLKP1Q107X0 134 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 MRPL51Q4U2R6 128 aaKnown RBP2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 ATP11AUNQ6ZP68 121 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 PRNTQ86SH4 94 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 DEFB104AQ8WTQ1 72 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 DIRC1Q969H9 104 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 ARHGAP5-AS1Q96IT6 56 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 TIMM21Q9BVV7 248 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 TMEM167BQ9NRX6 74 aa2.76□□□□□ -1.97
HMGB3P5-201ENST00000428894 A0A0J9YXV3 536 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 HIGD1CA8MV81 97 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 K7EIM0 57 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 K7EMI3 77 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 PRM2P04554 102 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 ARL14EPLP0DKL9 152 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 ZNF22P17026 224 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 ZNF138P52744 262 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 FXYD4P59646 89 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 Q1T7F1 81 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 SPANXN1Q5VSR9 72 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 C11orf72Q8NBR9 251 aa2.75□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGKV2D-26A0A0A0MRZ7 120 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 ZNF815PA8K554 130 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 ERHP84090 104 aaKnown RBP2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 WT1-ASQ06250 92 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 SCXQ7RTU7 201 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 LINC00269Q8N2A0 174 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 SPTSSBQ8NFR3 76 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 C7orf33Q8WU49 177 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 RPP21Q9H633 154 aaKnown RBP2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 NDUFA4L2Q9NRX3 87 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 PHLDA3Q9Y5J5 127 aa2.74□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV3-66A0A0C4DH42 116 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 A0A0J9YXY3 114 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 I3L2K1 104 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 IAPPP10997 89 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 RNASE4P34096 147 aaKnown RBP2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 EIF4EBP1Q13541 118 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 KIAA0087Q14695 138 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 SPANXN5Q5MJ07 72 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 GDF5OSQ5U4N7 250 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 LYPD5Q6UWN5 251 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 RNF185Q96GF1 192 aa2.73□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV6-1A0A0B4J1U7 121 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 SH2D1AO60880 128 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 IGHV3-33P01772 117 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 DEFB130BP0DP73 79 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 DEFB130AP0DP74 79 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 PRR3P79522 188 aaKnown RBP2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 ORMDL3Q8N138 153 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 TMEM141Q96I45 108 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 TTTY13Q9BZ97 58 aa2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 LRP1Q07954 4544 aaKnown RBP2.72□□□□□ -1.97
HMGB3P5-201ENST00000428894 A0A087WTM6 91 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms