RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 A0A0J9YXY3 114 aa5.46□□□□□ -1.54
SMC1A-203ENST00000428014 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
SMC1A-203ENST00000428014 RPL37AP8A6NKH3 93 aa5.45□□□□□ -1.54
SMC1A-203ENST00000428014 CRYGAP11844 174 aa5.45□□□□□ -1.54
SMC1A-203ENST00000428014 UBE2AP49459 152 aa5.45□□□□□ -1.54
SMC1A-203ENST00000428014 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
SMC1A-203ENST00000428014 SPATA45Q537H7 98 aa5.45□□□□□ -1.54
SMC1A-203ENST00000428014 BOD1L2Q8IYS8 172 aa5.45□□□□□ -1.54
SMC1A-203ENST00000428014 SPANXB1Q9NS25 103 aaPredicted RBP5.45□□□□□ -1.54
SMC1A-203ENST00000428014 KRTAP4-16G5E9R7 235 aaPredicted RBP5.44□□□□□ -1.54
SMC1A-203ENST00000428014 Q6ZVH6 145 aa5.44□□□□□ -1.54
SMC1A-203ENST00000428014 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
SMC1A-203ENST00000428014 MIEN1Q9BRT3 115 aa5.44□□□□□ -1.54
SMC1A-203ENST00000428014 PAM16Q9Y3D7 125 aa5.44□□□□□ -1.54
SMC1A-203ENST00000428014 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
SMC1A-203ENST00000428014 GAGE10A6NGK3 116 aa5.43□□□□□ -1.54
SMC1A-203ENST00000428014 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
SMC1A-203ENST00000428014 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
SMC1A-203ENST00000428014 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
SMC1A-203ENST00000428014 Q8NDZ9 215 aa5.43□□□□□ -1.54
SMC1A-203ENST00000428014 ZNF706Q9Y5V0 76 aaPredicted RBP5.43□□□□□ -1.54
SMC1A-203ENST00000428014 ZNF815PA8K554 130 aa5.42□□□□□ -1.54
SMC1A-203ENST00000428014 DLEU1O43261 78 aa5.42□□□□□ -1.54
SMC1A-203ENST00000428014 IGLV6-57P01721 117 aa5.42□□□□□ -1.54
SMC1A-203ENST00000428014 COX8AP10176 69 aa5.42□□□□□ -1.54
SMC1A-203ENST00000428014 C12orf57Q99622 126 aa5.42□□□□□ -1.54
SMC1A-203ENST00000428014 SPANXCQ9NY87 97 aa5.42□□□□□ -1.54
SMC1A-203ENST00000428014 SLC25A34Q6PIV7 304 aa5.41□□□□□ -1.54
SMC1A-203ENST00000428014 FAM19A1Q7Z5A9 133 aa5.41□□□□□ -1.54
SMC1A-203ENST00000428014 LINC00518Q8N0U6 118 aa5.41□□□□□ -1.54
SMC1A-203ENST00000428014 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
SMC1A-203ENST00000428014 TMEM238C9JI98 176 aa5.4□□□□□ -1.54
SMC1A-203ENST00000428014 IFITM1P13164 125 aa5.4□□□□□ -1.54
SMC1A-203ENST00000428014 PCP2Q8IVA1 136 aa5.4□□□□□ -1.54
SMC1A-203ENST00000428014 LITAFQ99732 161 aa5.4□□□□□ -1.54
SMC1A-203ENST00000428014 A0A087X002 238 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 A0A0U1RRA0 63 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 DDTP30046 118 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 SCGB1D4Q6XE38 83 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 C14orf144Q96I85 54 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 SPANXDQ9BXN6 97 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 TTTY13Q9BZ97 58 aa5.39□□□□□ -1.55
SMC1A-203ENST00000428014 ETDCA0A1B0GVM5 59 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 TSTD3H0UI37 97 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 PRLHP81277 87 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 ADAMTSL4-AS1Q5T5F5 129 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 Q6ZRX8 168 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 TYMSOSQ8TAI1 123 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 LINC00308Q8TCZ7 52 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 HIGD1BQ9P298 99 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 UQCR10Q9UDW1 63 aa5.38□□□□□ -1.55
SMC1A-203ENST00000428014 TRBV7-6A0A0J9YX20 115 aa5.37□□□□□ -1.55
SMC1A-203ENST00000428014 B5MCH6 92 aa5.37□□□□□ -1.55
SMC1A-203ENST00000428014 SPRR4Q96PI1 79 aa5.37□□□□□ -1.55
SMC1A-203ENST00000428014 HINT1P49773 126 aaPredicted RBP5.36□□□□□ -1.55
SMC1A-203ENST00000428014 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
SMC1A-203ENST00000428014 S100A7L2Q5SY68 101 aa5.36□□□□□ -1.55
SMC1A-203ENST00000428014 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
SMC1A-203ENST00000428014 TRAV23DV6A0A075B6W5 121 aa5.35□□□□□ -1.55
SMC1A-203ENST00000428014 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
SMC1A-203ENST00000428014 NCR3O14931 201 aa5.35□□□□□ -1.55
SMC1A-203ENST00000428014 ZNF73O43830 326 aaPredicted RBP5.35□□□□□ -1.55
SMC1A-203ENST00000428014 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
SMC1A-203ENST00000428014 DAND5Q8N907 189 aa5.35□□□□□ -1.55
SMC1A-203ENST00000428014 SMCR5Q8TEV8 140 aa5.35□□□□□ -1.55
SMC1A-203ENST00000428014 HIGD2AQ9BW72 106 aa5.35□□□□□ -1.55
SMC1A-203ENST00000428014 TAL2Q16559 108 aa5.34□□□□□ -1.55
SMC1A-203ENST00000428014 C2orf91Q6ZV80 131 aa5.34□□□□□ -1.55
SMC1A-203ENST00000428014 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.55
SMC1A-203ENST00000428014 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
SMC1A-203ENST00000428014 PRO1933Q9H354 126 aa5.34□□□□□ -1.55
SMC1A-203ENST00000428014 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
SMC1A-203ENST00000428014 DHRS4-AS1Q9P1J3 65 aa5.33□□□□□ -1.56
SMC1A-203ENST00000428014 LRP2P98164 4655 aa5.32□□□□□ -1.56
SMC1A-203ENST00000428014 A4D1N5 150 aa5.32□□□□□ -1.56
SMC1A-203ENST00000428014 SPRR1BP22528 89 aa5.32□□□□□ -1.56
SMC1A-203ENST00000428014 HIST1H4GQ99525 98 aa5.32□□□□□ -1.56
SMC1A-203ENST00000428014 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
SMC1A-203ENST00000428014 TRAV13-2A0A0B4J235 113 aa5.31□□□□□ -1.56
SMC1A-203ENST00000428014 SPINK1P00995 79 aa5.31□□□□□ -1.56
SMC1A-203ENST00000428014 HSD52Q0P140 79 aa5.31□□□□□ -1.56
SMC1A-203ENST00000428014 Q9BRP9 147 aa5.31□□□□□ -1.56
SMC1A-203ENST00000428014 ELOF1P60002 83 aaKnown RBP5.3□□□□□ -1.56
SMC1A-203ENST00000428014 FP248Q71RG6 208 aaPredicted RBP5.3□□□□□ -1.56
SMC1A-203ENST00000428014 A0A1B0GWB2 263 aa5.29□□□□□ -1.56
SMC1A-203ENST00000428014 MUSTN1Q8IVN3 82 aa5.29□□□□□ -1.56
SMC1A-203ENST00000428014 CEND1Q8N111 149 aa5.29□□□□□ -1.56
SMC1A-203ENST00000428014 NPC2P61916 151 aa5.28□□□□□ -1.56
SMC1A-203ENST00000428014 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
SMC1A-203ENST00000428014 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
SMC1A-203ENST00000428014 M0R143 59 aa5.27□□□□□ -1.57
SMC1A-203ENST00000428014 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
SMC1A-203ENST00000428014 NHP2Q9NX24 153 aaKnown RBP5.27□□□□□ -1.57
SMC1A-203ENST00000428014 ERC2-IT1O76042 136 aa5.26□□□□□ -1.57
SMC1A-203ENST00000428014 COX7BP24311 80 aa5.26□□□□□ -1.57
SMC1A-203ENST00000428014 C3orf22Q8N5N4 141 aa5.26□□□□□ -1.57
SMC1A-203ENST00000428014 OR13C6PQ8NH95 151 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms