RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CCL24O00175 119 aa7.55□□□□□ -1.2
SEC61A1-202ENST00000424880 ZNF73O43830 326 aaPredicted RBP7.55□□□□□ -1.2
SEC61A1-202ENST00000424880 DIRC1Q969H9 104 aa7.55□□□□□ -1.2
SEC61A1-202ENST00000424880 IGLV6-57P01721 117 aa7.55□□□□□ -1.2
SEC61A1-202ENST00000424880 C1orf64Q8NEQ6 169 aa7.54□□□□□ -1.2
SEC61A1-202ENST00000424880 HTN3P15516 51 aa7.54□□□□□ -1.2
SEC61A1-202ENST00000424880 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
SEC61A1-202ENST00000424880 HIGD2BQ4VC39 106 aa7.54□□□□□ -1.2
SEC61A1-202ENST00000424880 MAST4O15021 2626 aa7.53□□□□□ -1.2
SEC61A1-202ENST00000424880 COX7BP24311 80 aa7.53□□□□□ -1.2
SEC61A1-202ENST00000424880 CSNK1G2-AS1Q8NCQ2 148 aa7.53□□□□□ -1.2
SEC61A1-202ENST00000424880 LCE6AA0A183 80 aa7.52□□□□□ -1.21
SEC61A1-202ENST00000424880 HIVEP1P15822 2718 aa7.52□□□□□ -1.21
SEC61A1-202ENST00000424880 A0A1B0GUV1 79 aa7.51□□□□□ -1.21
SEC61A1-202ENST00000424880 DNAJC9-AS1A6NH13 148 aa7.51□□□□□ -1.21
SEC61A1-202ENST00000424880 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
SEC61A1-202ENST00000424880 A0A1W2PNN7 141 aa7.5□□□□□ -1.21
SEC61A1-202ENST00000424880 SMR3AQ99954 134 aa7.5□□□□□ -1.21
SEC61A1-202ENST00000424880 A8MUN3 132 aa7.49□□□□□ -1.21
SEC61A1-202ENST00000424880 RETNQ9HD89 108 aa7.49□□□□□ -1.21
SEC61A1-202ENST00000424880 C6orf48Q9UBA6 75 aa7.49□□□□□ -1.21
SEC61A1-202ENST00000424880 TRRAPQ9Y4A5 3859 aa7.48□□□□□ -1.21
SEC61A1-202ENST00000424880 TRAV22A0A0B4J277 110 aa7.48□□□□□ -1.21
SEC61A1-202ENST00000424880 TEP1Q99973 2627 aaKnown RBP7.47□□□□□ -1.21
SEC61A1-202ENST00000424880 PRO0255Q9UI72 69 aa7.47□□□□□ -1.21
SEC61A1-202ENST00000424880 SRRM2Q9UQ35 2752 aaKnown RBP7.47□□□□□ -1.21
SEC61A1-202ENST00000424880 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
SEC61A1-202ENST00000424880 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
SEC61A1-202ENST00000424880 ELOF1P60002 83 aaKnown RBP7.46□□□□□ -1.21
SEC61A1-202ENST00000424880 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
SEC61A1-202ENST00000424880 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
SEC61A1-202ENST00000424880 FBN1P35555 2871 aaKnown RBP7.44□□□□□ -1.22
SEC61A1-202ENST00000424880 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
SEC61A1-202ENST00000424880 DEFB135Q30KP9 77 aa7.43□□□□□ -1.22
SEC61A1-202ENST00000424880 K7EQZ3 153 aa7.42□□□□□ -1.22
SEC61A1-202ENST00000424880 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.42□□□□□ -1.22
SEC61A1-202ENST00000424880 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
SEC61A1-202ENST00000424880 MRPL55Q7Z7F7 128 aaKnown RBP7.42□□□□□ -1.22
SEC61A1-202ENST00000424880 CAMK2N2Q96S95 79 aa7.42□□□□□ -1.22
SEC61A1-202ENST00000424880 A0A0J9YWU9 116 aa7.41□□□□□ -1.22
SEC61A1-202ENST00000424880 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
SEC61A1-202ENST00000424880 IGHV4-30-4P0DP06 118 aa7.41□□□□□ -1.22
SEC61A1-202ENST00000424880 SYCNQ0VAF6 134 aa7.41□□□□□ -1.22
SEC61A1-202ENST00000424880 KTN1-AS1Q86SY8 53 aa7.41□□□□□ -1.22
SEC61A1-202ENST00000424880 TENM1Q9UKZ4 2725 aa7.41□□□□□ -1.22
SEC61A1-202ENST00000424880 LINC00528Q8N1L1 170 aa7.41□□□□□ -1.22
SEC61A1-202ENST00000424880 PSCAO43653 123 aa7.4□□□□□ -1.22
SEC61A1-202ENST00000424880 VPREB1P12018 145 aa7.4□□□□□ -1.22
SEC61A1-202ENST00000424880 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
SEC61A1-202ENST00000424880 KPRPQ5T749 579 aaPredicted RBP7.4□□□□□ -1.22
SEC61A1-202ENST00000424880 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.23
SEC61A1-202ENST00000424880 Q8N377 158 aa7.4□□□□□ -1.23
SEC61A1-202ENST00000424880 X6R8D5 127 aa7.4□□□□□ -1.23
SEC61A1-202ENST00000424880 UBE2BP63146 152 aa7.39□□□□□ -1.23
SEC61A1-202ENST00000424880 A0A1W2PNM2 257 aa7.39□□□□□ -1.23
SEC61A1-202ENST00000424880 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
SEC61A1-202ENST00000424880 NSD1Q96L73 2696 aaPredicted RBP7.38□□□□□ -1.23
SEC61A1-202ENST00000424880 IGLV1-51P01701 117 aa7.38□□□□□ -1.23
SEC61A1-202ENST00000424880 Q5VV11 94 aa7.38□□□□□ -1.23
SEC61A1-202ENST00000424880 CHKB-CPT1BH3BT56 60 aa7.37□□□□□ -1.23
SEC61A1-202ENST00000424880 WFDC10BQ8IUB3 73 aa7.37□□□□□ -1.23
SEC61A1-202ENST00000424880 DSCR10P59022 87 aa7.36□□□□□ -1.23
SEC61A1-202ENST00000424880 M0R378 163 aa7.36□□□□□ -1.23
SEC61A1-202ENST00000424880 KRTAP10-3P60369 221 aa7.36□□□□□ -1.23
SEC61A1-202ENST00000424880 ATRQ13535 2644 aa7.35□□□□□ -1.23
SEC61A1-202ENST00000424880 ETDCA0A1B0GVM5 59 aa7.35□□□□□ -1.23
SEC61A1-202ENST00000424880 C1orf137Q5JT78 98 aa7.35□□□□□ -1.23
SEC61A1-202ENST00000424880 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
SEC61A1-202ENST00000424880 COL7A1Q02388 2944 aa7.34□□□□□ -1.23
SEC61A1-202ENST00000424880 UBE2AP49459 152 aa7.34□□□□□ -1.23
SEC61A1-202ENST00000424880 CMC4P56277 68 aaPredicted RBP7.34□□□□□ -1.23
SEC61A1-202ENST00000424880 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
SEC61A1-202ENST00000424880 SERTAD4-AS1Q5TG53 156 aa7.34□□□□□ -1.23
SEC61A1-202ENST00000424880 GVQW2A0A096LPI5 108 aaPredicted RBP7.33□□□□□ -1.24
SEC61A1-202ENST00000424880 A0A1B0GW54 56 aa7.33□□□□□ -1.24
SEC61A1-202ENST00000424880 FAM168BA1KXE4 195 aa7.33□□□□□ -1.24
SEC61A1-202ENST00000424880 INAFM1C9JVW0 142 aa7.33□□□□□ -1.24
SEC61A1-202ENST00000424880 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
SEC61A1-202ENST00000424880 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
SEC61A1-202ENST00000424880 NDUFS5O43920 106 aa7.32□□□□□ -1.24
SEC61A1-202ENST00000424880 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
SEC61A1-202ENST00000424880 ATP11AUNQ6ZP68 121 aa7.31□□□□□ -1.24
SEC61A1-202ENST00000424880 NKAPP1Q8N9T2 125 aa7.3□□□□□ -1.24
SEC61A1-202ENST00000424880 NDUFB1O75438 58 aa7.3□□□□□ -1.24
SEC61A1-202ENST00000424880 Q9BRP9 147 aa7.3□□□□□ -1.24
SEC61A1-202ENST00000424880 C7orf33Q8WU49 177 aa7.29□□□□□ -1.24
SEC61A1-202ENST00000424880 LIMD2Q9BT23 127 aa7.29□□□□□ -1.24
SEC61A1-202ENST00000424880 A6NN06 94 aa7.29□□□□□ -1.24
SEC61A1-202ENST00000424880 PRR34Q9NV39 138 aa7.29□□□□□ -1.24
SEC61A1-202ENST00000424880 TENM3Q9P273 2699 aa7.28□□□□□ -1.24
SEC61A1-202ENST00000424880 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
SEC61A1-202ENST00000424880 IGLV5-48A0A075B6I7 105 aa7.28□□□□□ -1.24
SEC61A1-202ENST00000424880 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
SEC61A1-202ENST00000424880 LELP1Q5T871 98 aa7.27□□□□□ -1.24
SEC61A1-202ENST00000424880 B9D2Q9BPU9 175 aa7.27□□□□□ -1.24
SEC61A1-202ENST00000424880 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
SEC61A1-202ENST00000424880 IGKV2D-24A0A075B6R9 120 aa7.26□□□□□ -1.25
SEC61A1-202ENST00000424880 A6NED7 52 aa7.26□□□□□ -1.25
SEC61A1-202ENST00000424880 LCA10Q71F78 164 aa7.26□□□□□ -1.25
SEC61A1-202ENST00000424880 Q8NBF4 154 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms