RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 Q8IZM0 81 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 KCNRGQ8N5I3 272 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 SFT2D1Q8WV19 159 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 TMEM238C9JI98 176 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 IGLV6-57P01721 117 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 IFI27P40305 119 aaPredicted RBP2.53□□□□□ -2
SFXN1-202ENST00000421887 RPL39P62891 51 aaKnown RBP2.53□□□□□ -2
SFXN1-202ENST00000421887 CCL20P78556 96 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 MRPS36P82909 103 aaKnown RBP2.53□□□□□ -2
SFXN1-202ENST00000421887 MOBPQ13875 183 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 RGS21Q2M5E4 152 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 FA2HQ7L5A8 372 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 SSBP3-AS1Q7Z2R9 100 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 AKAP14Q86UN6 197 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 C2orf88Q9BSF0 95 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 RBM12B-AS1Q9P1G2 102 aa2.53□□□□□ -2
SFXN1-202ENST00000421887 RAB5BP61020 215 aa2.52□□□□□ -2.01
SFXN1-202ENST00000421887 COX19Q49B96 90 aa2.52□□□□□ -2.01
SFXN1-202ENST00000421887 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
SFXN1-202ENST00000421887 TINCRA0A1B0GVN0 87 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 M0R378 163 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 CEBPGP53567 150 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 AMN1Q8IY45 258 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 FAM213BQ8TBF2 198 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 LIMD2Q9BT23 127 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 TMEM191AQ9H0A3 160 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 SND1-IT1Q9HBX3 110 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 MANBALQ9NQG1 85 aa2.51□□□□□ -2.01
SFXN1-202ENST00000421887 A0A1B0GUT8 65 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 KRTAP10-10P60014 251 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 RPL37P61927 97 aaKnown RBP2.5□□□□□ -2.01
SFXN1-202ENST00000421887 C4orf26Q17RF5 130 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 C9orf153Q5TBE3 101 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 TMEM141Q96I45 108 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 MED9Q9NWA0 146 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 GNG13Q9P2W3 67 aa2.5□□□□□ -2.01
SFXN1-202ENST00000421887 FXYD6-FXYD2A0A087WZ82 144 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 C20orf202A1L168 122 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 UMAD1C9J7I0 102 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 C8orf87E5RJ46 101 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 PDE6DO43924 150 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 LGALS3P17931 250 aaKnown RBP2.49□□□□□ -2.01
SFXN1-202ENST00000421887 HERVK_113P63121 156 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 SEC11AP67812 179 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 Q5W150 140 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 MBD3L1Q8WWY6 194 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 C20orf78Q9BR46 151 aa2.49□□□□□ -2.01
SFXN1-202ENST00000421887 MT2AP02795 61 aa2.48□□□□□ -2.01
SFXN1-202ENST00000421887 MP68P56378 58 aa2.48□□□□□ -2.01
SFXN1-202ENST00000421887 RAB14P61106 215 aa2.48□□□□□ -2.01
SFXN1-202ENST00000421887 LINC00483Q53H64 154 aa2.48□□□□□ -2.01
SFXN1-202ENST00000421887 FAM19A3Q7Z5A8 133 aa2.48□□□□□ -2.01
SFXN1-202ENST00000421887 EIF5A2Q9GZV4 153 aaKnown RBP2.48□□□□□ -2.01
SFXN1-202ENST00000421887 TRBV20-1A0A075B6N2 111 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 ETDCA0A1B0GVM5 59 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 LINC00862A6NCI5 91 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 HIGD1CA8MV81 97 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 CKS2P33552 79 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 S100A12P80511 92 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 ATP11AUNQ6ZP68 121 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 Q8N9L7 120 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 COX7B2Q8TF08 81 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 SMIM2Q9BVW6 85 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 MAP1LC3AQ9H492 121 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 CDKN2A-AS1Q9UH64 79 aa2.47□□□□□ -2.01
SFXN1-202ENST00000421887 FLGP20930 4061 aaPredicted RBP2.46□□□□□ -2.02
SFXN1-202ENST00000421887 TRBV24-1A0A075B6N3 115 aa2.46□□□□□ -2.02
SFXN1-202ENST00000421887 MT1FP04733 61 aa2.46□□□□□ -2.02
SFXN1-202ENST00000421887 LINC00614P0C842 121 aa2.46□□□□□ -2.02
SFXN1-202ENST00000421887 S100A2P29034 98 aa2.46□□□□□ -2.02
SFXN1-202ENST00000421887 HRCT1Q6UXD1 115 aa2.46□□□□□ -2.02
SFXN1-202ENST00000421887 ARPC5O15511 151 aa2.45□□□□□ -2.02
SFXN1-202ENST00000421887 MRPL51Q4U2R6 128 aaKnown RBP2.45□□□□□ -2.02
SFXN1-202ENST00000421887 FAM104BQ5XKR9 115 aa2.45□□□□□ -2.02
SFXN1-202ENST00000421887 SCGB1D4Q6XE38 83 aa2.45□□□□□ -2.02
SFXN1-202ENST00000421887 MIR7-3HGQ8N6C7 128 aa2.45□□□□□ -2.02
SFXN1-202ENST00000421887 S100ZQ8WXG8 99 aa2.45□□□□□ -2.02
SFXN1-202ENST00000421887 NEBP20929 6669 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 TMEM250H0YL14 139 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 K7ERS5 55 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 Q5BKY6 102 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 COMMD7Q86VX2 200 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 AMELXQ99217 191 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 CYSLTR1Q9Y271 337 aa2.44□□□□□ -2.02
SFXN1-202ENST00000421887 TRAV9-1A0A075B6T8 112 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 FAM236DA0A1B0GTK5 79 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 D6R8Y8 96 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 FAM236CP0DP71 79 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 COX17Q14061 63 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 SLC51BQ86UW2 128 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 C20orf166-AS1Q96NR2 134 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
SFXN1-202ENST00000421887 F8W036 122 aa2.42□□□□□ -2.02
SFXN1-202ENST00000421887 NPYP01303 97 aa2.42□□□□□ -2.02
SFXN1-202ENST00000421887 PPBPP02775 128 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms