RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 DLEU1O43261 78 aa12.41□□□□□ -0.42
HMGXB4-203ENST00000420166 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
HMGXB4-203ENST00000420166 LINC00518Q8N0U6 118 aa12.41□□□□□ -0.42
HMGXB4-203ENST00000420166 ETDCA0A1B0GVM5 59 aa12.4□□□□□ -0.42
HMGXB4-203ENST00000420166 C14orf144Q96I85 54 aa12.4□□□□□ -0.42
HMGXB4-203ENST00000420166 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
HMGXB4-203ENST00000420166 TRAV23DV6A0A075B6W5 121 aa12.38□□□□□ -0.43
HMGXB4-203ENST00000420166 CBY1Q9Y3M2 126 aa12.37□□□□□ -0.43
HMGXB4-203ENST00000420166 KRTAP10-8P60410 259 aa12.36□□□□□ -0.43
HMGXB4-203ENST00000420166 HIGD2AQ9BW72 106 aa12.36□□□□□ -0.43
HMGXB4-203ENST00000420166 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
HMGXB4-203ENST00000420166 B5MCH6 92 aa12.34□□□□□ -0.43
HMGXB4-203ENST00000420166 ZNF73O43830 326 aaPredicted RBP12.34□□□□□ -0.43
HMGXB4-203ENST00000420166 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
HMGXB4-203ENST00000420166 HIST1H4GQ99525 98 aa12.32□□□□□ -0.44
HMGXB4-203ENST00000420166 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
HMGXB4-203ENST00000420166 Q6ZRX8 168 aa12.31□□□□□ -0.44
HMGXB4-203ENST00000420166 HERC1Q15751 4861 aa12.31□□□□□ -0.44
HMGXB4-203ENST00000420166 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
HMGXB4-203ENST00000420166 A4D1N5 150 aa12.29□□□□□ -0.44
HMGXB4-203ENST00000420166 A6NDN8 102 aa12.29□□□□□ -0.44
HMGXB4-203ENST00000420166 C2orf91Q6ZV80 131 aa12.29□□□□□ -0.44
HMGXB4-203ENST00000420166 TRAV13-2A0A0B4J235 113 aa12.28□□□□□ -0.44
HMGXB4-203ENST00000420166 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.45
HMGXB4-203ENST00000420166 HINT1P49773 126 aaPredicted RBP12.27□□□□□ -0.45
HMGXB4-203ENST00000420166 Q9BRP9 147 aa12.27□□□□□ -0.45
HMGXB4-203ENST00000420166 ANAPC11Q9NYG5 84 aa12.27□□□□□ -0.45
HMGXB4-203ENST00000420166 TNXBP22105 4242 aa12.25□□□□□ -0.45
HMGXB4-203ENST00000420166 A0A087X002 238 aa12.25□□□□□ -0.45
HMGXB4-203ENST00000420166 CRYGAP11844 174 aa12.25□□□□□ -0.45
HMGXB4-203ENST00000420166 FAM229BQ4G0N7 80 aa12.25□□□□□ -0.45
HMGXB4-203ENST00000420166 C6orf99Q4VX62 202 aa12.25□□□□□ -0.45
HMGXB4-203ENST00000420166 SPRR4Q96PI1 79 aa12.25□□□□□ -0.45
HMGXB4-203ENST00000420166 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
HMGXB4-203ENST00000420166 ERC2-IT1O76042 136 aa12.23□□□□□ -0.45
HMGXB4-203ENST00000420166 COX7BP24311 80 aa12.21□□□□□ -0.45
HMGXB4-203ENST00000420166 TAL2Q16559 108 aa12.21□□□□□ -0.45
HMGXB4-203ENST00000420166 C12orf57Q99622 126 aa12.21□□□□□ -0.45
HMGXB4-203ENST00000420166 ELOF1P60002 83 aaKnown RBP12.2□□□□□ -0.46
HMGXB4-203ENST00000420166 SMIM11BQ8TCY0 68 aa12.2□□□□□ -0.46
HMGXB4-203ENST00000420166 TRBV7-6A0A0J9YX20 115 aa12.19□□□□□ -0.46
HMGXB4-203ENST00000420166 KRTAP13-2Q52LG2 175 aa12.19□□□□□ -0.46
HMGXB4-203ENST00000420166 DHRS4-AS1Q9P1J3 65 aa12.18□□□□□ -0.46
HMGXB4-203ENST00000420166 CEND1Q8N111 149 aa12.17□□□□□ -0.46
HMGXB4-203ENST00000420166 UQCR10Q9UDW1 63 aa12.17□□□□□ -0.46
HMGXB4-203ENST00000420166 A0A1B0GWB2 263 aa12.16□□□□□ -0.46
HMGXB4-203ENST00000420166 TYMSOSQ8TAI1 123 aa12.16□□□□□ -0.46
HMGXB4-203ENST00000420166 CFC1BP0CG36 223 aa12.15□□□□□ -0.46
HMGXB4-203ENST00000420166 CFC1P0CG37 223 aa12.15□□□□□ -0.46
HMGXB4-203ENST00000420166 SMIM6P0DI80 62 aa12.15□□□□□ -0.46
HMGXB4-203ENST00000420166 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
HMGXB4-203ENST00000420166 GAGE2AQ6NT46 116 aa12.15□□□□□ -0.46
HMGXB4-203ENST00000420166 HSD52Q0P140 79 aa12.13□□□□□ -0.47
HMGXB4-203ENST00000420166 A0A0B4J2C4 111 aa12.12□□□□□ -0.47
HMGXB4-203ENST00000420166 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
HMGXB4-203ENST00000420166 ST20-AS1Q8NBB2 130 aa12.12□□□□□ -0.47
HMGXB4-203ENST00000420166 TMEM238LA0A1B0GVL6 79 aa12.11□□□□□ -0.47
HMGXB4-203ENST00000420166 A6NJY4 79 aa12.11□□□□□ -0.47
HMGXB4-203ENST00000420166 FXYD2P54710 66 aa12.11□□□□□ -0.47
HMGXB4-203ENST00000420166 RAB37Q96AX2 223 aa12.11□□□□□ -0.47
HMGXB4-203ENST00000420166 LOC105371267A0A1B0GV96 52 aa12.1□□□□□ -0.47
HMGXB4-203ENST00000420166 VAMP3Q15836 100 aa12.09□□□□□ -0.47
HMGXB4-203ENST00000420166 PRO1933Q9H354 126 aa12.08□□□□□ -0.48
HMGXB4-203ENST00000420166 H7C2G1 150 aa12.06□□□□□ -0.48
HMGXB4-203ENST00000420166 NHP2Q9NX24 153 aaKnown RBP12.05□□□□□ -0.48
HMGXB4-203ENST00000420166 SPRR1BP22528 89 aa12.04□□□□□ -0.48
HMGXB4-203ENST00000420166 BVES-AS1Q5T3Y7 98 aa12.03□□□□□ -0.48
HMGXB4-203ENST00000420166 LINC00575Q6W349 94 aa12.03□□□□□ -0.48
HMGXB4-203ENST00000420166 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
HMGXB4-203ENST00000420166 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
HMGXB4-203ENST00000420166 IGLV9-49A0A0B4J1Y8 123 aa12.02□□□□□ -0.49
HMGXB4-203ENST00000420166 SLC25A20O43772 301 aa12.01□□□□□ -0.49
HMGXB4-203ENST00000420166 MOBPQ13875 183 aa12.01□□□□□ -0.49
HMGXB4-203ENST00000420166 HMCN2Q8NDA2 5059 aa11.99□□□□□ -0.49
HMGXB4-203ENST00000420166 TSPAN13O95857 204 aa11.99□□□□□ -0.49
HMGXB4-203ENST00000420166 Q1RN00 199 aa11.99□□□□□ -0.49
HMGXB4-203ENST00000420166 DEFB105AQ8NG35 78 aa11.99□□□□□ -0.49
HMGXB4-203ENST00000420166 IGLV5-48A0A075B6I7 105 aa11.98□□□□□ -0.49
HMGXB4-203ENST00000420166 TEX49A0A1B0GTD5 131 aa11.98□□□□□ -0.49
HMGXB4-203ENST00000420166 Q8NBF4 154 aa11.98□□□□□ -0.49
HMGXB4-203ENST00000420166 hADV29S1A0JD25 119 aa11.97□□□□□ -0.49
HMGXB4-203ENST00000420166 LINC01547P58512 204 aaPredicted RBP11.97□□□□□ -0.49
HMGXB4-203ENST00000420166 K7ERJ3 54 aa11.96□□□□□ -0.49
HMGXB4-203ENST00000420166 SSBP3-AS1Q7Z2R9 100 aa11.96□□□□□ -0.49
HMGXB4-203ENST00000420166 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
HMGXB4-203ENST00000420166 LAMTOR3Q9UHA4 124 aa11.95□□□□□ -0.5
HMGXB4-203ENST00000420166 SPAG11AQ6PDA7 123 aa11.94□□□□□ -0.5
HMGXB4-203ENST00000420166 H0YGX0 51 aa11.93□□□□□ -0.5
HMGXB4-203ENST00000420166 CTAG1AP78358 180 aa11.93□□□□□ -0.5
HMGXB4-203ENST00000420166 Q6ZQY7 126 aa11.93□□□□□ -0.5
HMGXB4-203ENST00000420166 TSTD3H0UI37 97 aa11.91□□□□□ -0.5
HMGXB4-203ENST00000420166 TRIAP1O43715 76 aa11.91□□□□□ -0.5
HMGXB4-203ENST00000420166 C4orf48Q5BLP8 95 aa11.91□□□□□ -0.5
HMGXB4-203ENST00000420166 Q8N377 158 aa11.91□□□□□ -0.5
HMGXB4-203ENST00000420166 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.9□□□□□ -0.5
HMGXB4-203ENST00000420166 SMIM29Q86T20 159 aa11.9□□□□□ -0.5
HMGXB4-203ENST00000420166 M0R143 59 aa11.89□□□□□ -0.51
HMGXB4-203ENST00000420166 FAM218AQ96MZ4 157 aa11.89□□□□□ -0.51
HMGXB4-203ENST00000420166 SNCGO76070 127 aa11.86□□□□□ -0.51
HMGXB4-203ENST00000420166 SPINK1P00995 79 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms