RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ADAMTSL4-AS1Q5T5F5 129 aa5.51□□□□□ -1.53
NUP50-205ENST00000419387 LITAFQ99732 161 aa5.51□□□□□ -1.53
NUP50-205ENST00000419387 LOC107984156A0A0G2JMH3 177 aa5.5□□□□□ -1.53
NUP50-205ENST00000419387 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
NUP50-205ENST00000419387 MYMXA0A1B0GTQ4 84 aa5.5□□□□□ -1.53
NUP50-205ENST00000419387 ARL17AQ8IVW1 177 aa5.5□□□□□ -1.53
NUP50-205ENST00000419387 A0A0U1RRA0 63 aa5.49□□□□□ -1.53
NUP50-205ENST00000419387 H3BS24 57 aa5.49□□□□□ -1.53
NUP50-205ENST00000419387 NMUP48645 174 aa5.49□□□□□ -1.53
NUP50-205ENST00000419387 HERVK_113P61574 105 aa5.49□□□□□ -1.53
NUP50-205ENST00000419387 LINC00304Q8N9R0 145 aa5.49□□□□□ -1.53
NUP50-205ENST00000419387 SOSTDC1Q6X4U4 206 aa5.48□□□□□ -1.53
NUP50-205ENST00000419387 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
NUP50-205ENST00000419387 DAND5Q8N907 189 aa5.48□□□□□ -1.53
NUP50-205ENST00000419387 MUC2Q02817 5179 aa5.47□□□□□ -1.53
NUP50-205ENST00000419387 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
NUP50-205ENST00000419387 CTAG1AP78358 180 aa5.47□□□□□ -1.53
NUP50-205ENST00000419387 PCP2Q8IVA1 136 aa5.47□□□□□ -1.53
NUP50-205ENST00000419387 C20orf202A1L168 122 aa5.46□□□□□ -1.54
NUP50-205ENST00000419387 MEIG1Q5JSS6 88 aa5.46□□□□□ -1.54
NUP50-205ENST00000419387 BOD1L2Q8IYS8 172 aa5.46□□□□□ -1.54
NUP50-205ENST00000419387 C3orf22Q8N5N4 141 aa5.46□□□□□ -1.54
NUP50-205ENST00000419387 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.54
NUP50-205ENST00000419387 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
NUP50-205ENST00000419387 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
NUP50-205ENST00000419387 LINC00587B1AMM8 73 aa5.45□□□□□ -1.54
NUP50-205ENST00000419387 JOSD1Q15040 202 aaPredicted RBP5.45□□□□□ -1.54
NUP50-205ENST00000419387 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
NUP50-205ENST00000419387 TMA7Q9Y2S6 64 aaKnown RBP5.45□□□□□ -1.54
NUP50-205ENST00000419387 PRYO14603 147 aa5.44□□□□□ -1.54
NUP50-205ENST00000419387 TIMM17BO60830 172 aa5.44□□□□□ -1.54
NUP50-205ENST00000419387 SCGB1D1O95968 90 aa5.44□□□□□ -1.54
NUP50-205ENST00000419387 KCNQ1DNQ9H478 68 aa5.44□□□□□ -1.54
NUP50-205ENST00000419387 NCR3O14931 201 aa5.43□□□□□ -1.54
NUP50-205ENST00000419387 SPRR1AP35321 89 aa5.43□□□□□ -1.54
NUP50-205ENST00000419387 AKR1D1P51857 326 aa5.43□□□□□ -1.54
NUP50-205ENST00000419387 PYY3Q5JQD4 70 aa5.43□□□□□ -1.54
NUP50-205ENST00000419387 SPAG11AQ6PDA7 123 aa5.43□□□□□ -1.54
NUP50-205ENST00000419387 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
NUP50-205ENST00000419387 ZNF706Q9Y5V0 76 aaPredicted RBP5.43□□□□□ -1.54
NUP50-205ENST00000419387 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
NUP50-205ENST00000419387 A0A0U1RQV1 116 aa5.42□□□□□ -1.54
NUP50-205ENST00000419387 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
NUP50-205ENST00000419387 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
NUP50-205ENST00000419387 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
NUP50-205ENST00000419387 TRBV10-3A0A0K0K1G6 114 aa5.41□□□□□ -1.54
NUP50-205ENST00000419387 ETDCA0A1B0GVM5 59 aa5.41□□□□□ -1.54
NUP50-205ENST00000419387 KRTAP4-16G5E9R7 235 aaPredicted RBP5.41□□□□□ -1.54
NUP50-205ENST00000419387 NDUFC2O95298 119 aa5.41□□□□□ -1.54
NUP50-205ENST00000419387 SPANXDQ9BXN6 97 aa5.41□□□□□ -1.54
NUP50-205ENST00000419387 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
NUP50-205ENST00000419387 SPANXCQ9NY87 97 aa5.41□□□□□ -1.54
NUP50-205ENST00000419387 NPC2P61916 151 aa5.4□□□□□ -1.54
NUP50-205ENST00000419387 S100A12P80511 92 aa5.4□□□□□ -1.54
NUP50-205ENST00000419387 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
NUP50-205ENST00000419387 MUC17Q685J3 4493 aa5.4□□□□□ -1.55
NUP50-205ENST00000419387 TRBV10-2A0A0K0K1G8 114 aa5.39□□□□□ -1.55
NUP50-205ENST00000419387 COX8AP10176 69 aa5.39□□□□□ -1.55
NUP50-205ENST00000419387 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
NUP50-205ENST00000419387 B5MCH6 92 aa5.38□□□□□ -1.55
NUP50-205ENST00000419387 IGLV6-57P01721 117 aa5.38□□□□□ -1.55
NUP50-205ENST00000419387 DDTP30046 118 aa5.38□□□□□ -1.55
NUP50-205ENST00000419387 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
NUP50-205ENST00000419387 MUSTN1Q8IVN3 82 aa5.38□□□□□ -1.55
NUP50-205ENST00000419387 Q8NBF4 154 aa5.38□□□□□ -1.55
NUP50-205ENST00000419387 HSBP1L1C9JCN9 74 aa5.37□□□□□ -1.55
NUP50-205ENST00000419387 DLEU1O43261 78 aa5.37□□□□□ -1.55
NUP50-205ENST00000419387 GAGE2AQ6NT46 116 aa5.37□□□□□ -1.55
NUP50-205ENST00000419387 SCGB1D4Q6XE38 83 aa5.37□□□□□ -1.55
NUP50-205ENST00000419387 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
NUP50-205ENST00000419387 C14orf144Q96I85 54 aa5.37□□□□□ -1.55
NUP50-205ENST00000419387 SPANXB1Q9NS25 103 aaPredicted RBP5.37□□□□□ -1.55
NUP50-205ENST00000419387 PAM16Q9Y3D7 125 aa5.37□□□□□ -1.55
NUP50-205ENST00000419387 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
NUP50-205ENST00000419387 SPINK1P00995 79 aa5.36□□□□□ -1.55
NUP50-205ENST00000419387 SPATA45Q537H7 98 aa5.36□□□□□ -1.55
NUP50-205ENST00000419387 C2orf91Q6ZV80 131 aa5.36□□□□□ -1.55
NUP50-205ENST00000419387 Q6ZVH6 145 aa5.36□□□□□ -1.55
NUP50-205ENST00000419387 MIEN1Q9BRT3 115 aa5.36□□□□□ -1.55
NUP50-205ENST00000419387 IFITM1P13164 125 aa5.35□□□□□ -1.55
NUP50-205ENST00000419387 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
NUP50-205ENST00000419387 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
NUP50-205ENST00000419387 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
NUP50-205ENST00000419387 Q6ZRX8 168 aa5.34□□□□□ -1.55
NUP50-205ENST00000419387 Q9BRP9 147 aa5.34□□□□□ -1.55
NUP50-205ENST00000419387 VAMP8Q9BV40 100 aa5.34□□□□□ -1.55
NUP50-205ENST00000419387 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
NUP50-205ENST00000419387 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
NUP50-205ENST00000419387 MOBPQ13875 183 aa5.33□□□□□ -1.56
NUP50-205ENST00000419387 HIGD1BQ9P298 99 aa5.33□□□□□ -1.56
NUP50-205ENST00000419387 TRAV23DV6A0A075B6W5 121 aa5.32□□□□□ -1.56
NUP50-205ENST00000419387 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
NUP50-205ENST00000419387 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
NUP50-205ENST00000419387 A4D1N5 150 aa5.31□□□□□ -1.56
NUP50-205ENST00000419387 ZNF73O43830 326 aaPredicted RBP5.31□□□□□ -1.56
NUP50-205ENST00000419387 SLC25A34Q6PIV7 304 aa5.31□□□□□ -1.56
NUP50-205ENST00000419387 LINC00518Q8N0U6 118 aa5.31□□□□□ -1.56
NUP50-205ENST00000419387 HINT1P49773 126 aaPredicted RBP5.3□□□□□ -1.56
NUP50-205ENST00000419387 Q8N377 158 aa5.3□□□□□ -1.56
NUP50-205ENST00000419387 CBY1Q9Y3M2 126 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms