RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 Q8NDZ9 215 aa3.84□□□□□ -1.79
HMGB3-202ENST00000419110 SMIM11BQ8TCY0 68 aa3.84□□□□□ -1.79
HMGB3-202ENST00000419110 FRAS1Q86XX4 4008 aa3.84□□□□□ -1.8
HMGB3-202ENST00000419110 LST1O00453 97 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 SNCGO76070 127 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 TCL1BO95988 128 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 IGLV6-57P01721 117 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 UBE2V1Q13404 147 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 SERTAD4-AS1Q5TG53 156 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 KMT2AQ03164 3969 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 DNAH2Q9P225 4427 aa3.83□□□□□ -1.8
HMGB3-202ENST00000419110 H0YGX0 51 aa3.82□□□□□ -1.8
HMGB3-202ENST00000419110 PRR3P79522 188 aaKnown RBP3.82□□□□□ -1.8
HMGB3-202ENST00000419110 C6orf99Q4VX62 202 aa3.82□□□□□ -1.8
HMGB3-202ENST00000419110 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
HMGB3-202ENST00000419110 C7orf33Q8WU49 177 aa3.82□□□□□ -1.8
HMGB3-202ENST00000419110 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
HMGB3-202ENST00000419110 A0A1B0GX51 115 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 FAM168BA1KXE4 195 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 H3BMG7 143 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 SLC25A20O43772 301 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 ZNF73O43830 326 aaPredicted RBP3.81□□□□□ -1.8
HMGB3-202ENST00000419110 TRACP01848 142 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 CHTF8P0CG12 524 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 UBE2BP63146 152 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 LINC00336Q6ZUF6 198 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 SPACA4Q8TDM5 124 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 SACSQ9NZJ4 4579 aa3.81□□□□□ -1.8
HMGB3-202ENST00000419110 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
HMGB3-202ENST00000419110 ETDCA0A1B0GVM5 59 aa3.8□□□□□ -1.8
HMGB3-202ENST00000419110 C9JAW5 83 aa3.8□□□□□ -1.8
HMGB3-202ENST00000419110 H3BT86 120 aa3.8□□□□□ -1.8
HMGB3-202ENST00000419110 COX7BP24311 80 aa3.8□□□□□ -1.8
HMGB3-202ENST00000419110 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
HMGB3-202ENST00000419110 ELOF1P60002 83 aaKnown RBP3.79□□□□□ -1.8
HMGB3-202ENST00000419110 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
HMGB3-202ENST00000419110 MTURNQ8N3F0 131 aa3.79□□□□□ -1.8
HMGB3-202ENST00000419110 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
HMGB3-202ENST00000419110 KCNQ1DNQ9H478 68 aa3.79□□□□□ -1.8
HMGB3-202ENST00000419110 A0A087WYN8 130 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 RPL37AP8A6NKH3 93 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 F8W1H4 67 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 PLA2G1BP04054 148 aaKnown RBP3.78□□□□□ -1.8
HMGB3-202ENST00000419110 REG3GQ6UW15 175 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 DPH3Q96FX2 82 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 FAM218AQ96MZ4 157 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 KRTAP17-1Q9BYP8 105 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 HECTD4Q9Y4D8 3996 aa3.78□□□□□ -1.8
HMGB3-202ENST00000419110 IGLV1-50A0A075B6I6 118 aa3.77□□□□□ -1.81
HMGB3-202ENST00000419110 A0A1W2PNN7 141 aa3.77□□□□□ -1.81
HMGB3-202ENST00000419110 H3BQ85 93 aa3.77□□□□□ -1.81
HMGB3-202ENST00000419110 Q6ZRX8 168 aa3.77□□□□□ -1.81
HMGB3-202ENST00000419110 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
HMGB3-202ENST00000419110 DHRS4-AS1Q9P1J3 65 aa3.77□□□□□ -1.81
HMGB3-202ENST00000419110 hADV29S1A0JD25 119 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 SPRR1AP35321 89 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3-202ENST00000419110 LINC00575Q6W349 94 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 PHF5AQ7RTV0 110 aaKnown RBP3.76□□□□□ -1.81
HMGB3-202ENST00000419110 TEN1Q86WV5 123 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 ANKRD29Q8N6D5 301 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 PLAC8Q9NZF1 115 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 PRO0461Q9UI25 63 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 HYDINQ4G0P3 5121 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
HMGB3-202ENST00000419110 PANO1I0J062 215 aa3.75□□□□□ -1.81
HMGB3-202ENST00000419110 UBE2AP49459 152 aa3.75□□□□□ -1.81
HMGB3-202ENST00000419110 OCIAD2Q56VL3 154 aa3.75□□□□□ -1.81
HMGB3-202ENST00000419110 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.75□□□□□ -1.81
HMGB3-202ENST00000419110 Q6ZQY7 126 aa3.75□□□□□ -1.81
HMGB3-202ENST00000419110 FAM19A1Q7Z5A9 133 aa3.75□□□□□ -1.81
HMGB3-202ENST00000419110 DNAH11Q96DT5 4516 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 DNAH5Q8TE73 4624 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 B5MCH6 92 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 J3QR89 54 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 BCE1O60756 84 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 INAFM2P0DMQ5 153 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 ETDBQ3ZM63 59 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 RYR2Q92736 4967 aa3.74□□□□□ -1.81
HMGB3-202ENST00000419110 EPM2AB3EWF7 344 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 KRTAP4-16G5E9R7 235 aaPredicted RBP3.73□□□□□ -1.81
HMGB3-202ENST00000419110 K7ERU9 68 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 PRLHP81277 87 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 Q6ZSA8 131 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 SCXQ7RTU7 201 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 PPDPFLQ8WWR9 84 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 LINC01600Q96MT4 127 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 HIGD2AQ9BW72 106 aa3.73□□□□□ -1.81
HMGB3-202ENST00000419110 H0Y9J4 135 aa3.72□□□□□ -1.81
HMGB3-202ENST00000419110 TMEM256-PLSCR3K7ERE1 68 aa3.72□□□□□ -1.81
HMGB3-202ENST00000419110 BAALC-AS2P0C853 105 aa3.72□□□□□ -1.81
HMGB3-202ENST00000419110 KRTAP10-1P60331 282 aa3.72□□□□□ -1.81
HMGB3-202ENST00000419110 PKD1P98161 4303 aa3.72□□□□□ -1.81
HMGB3-202ENST00000419110 DNAH8Q96JB1 4490 aa3.71□□□□□ -1.82
HMGB3-202ENST00000419110 A0A1B0GVY2 172 aa3.71□□□□□ -1.82
HMGB3-202ENST00000419110 F8WEM9 126 aa3.71□□□□□ -1.82
HMGB3-202ENST00000419110 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
HMGB3-202ENST00000419110 C21orf62-AS1Q17RA5 79 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms