RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FAM208BQ5VWN6 2430 aa5.31□□□□□ -1.56
HMGXB4-202ENST00000418170 FLNAP21333 2647 aaKnown RBP5.31□□□□□ -1.56
HMGXB4-202ENST00000418170 FN1P02751 2386 aaKnown RBP5.3□□□□□ -1.56
HMGXB4-202ENST00000418170 IGLV1-51P01701 117 aa5.3□□□□□ -1.56
HMGXB4-202ENST00000418170 CD164Q04900 197 aa5.3□□□□□ -1.56
HMGXB4-202ENST00000418170 A0A1B0GW54 56 aa5.3□□□□□ -1.56
HMGXB4-202ENST00000418170 M0R378 163 aa5.3□□□□□ -1.56
HMGXB4-202ENST00000418170 IGLV5-48A0A075B6I7 105 aa5.29□□□□□ -1.56
HMGXB4-202ENST00000418170 ETDCA0A1B0GVM5 59 aa5.29□□□□□ -1.56
HMGXB4-202ENST00000418170 PSCAO43653 123 aa5.29□□□□□ -1.56
HMGXB4-202ENST00000418170 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.28□□□□□ -1.56
HMGXB4-202ENST00000418170 KPRPQ5T749 579 aaPredicted RBP5.28□□□□□ -1.56
HMGXB4-202ENST00000418170 PRR34Q9NV39 138 aa5.28□□□□□ -1.56
HMGXB4-202ENST00000418170 KRTAP1-1Q07627 177 aa5.28□□□□□ -1.56
HMGXB4-202ENST00000418170 X6R8D5 127 aa5.28□□□□□ -1.56
HMGXB4-202ENST00000418170 A8MUN3 132 aa5.27□□□□□ -1.57
HMGXB4-202ENST00000418170 SYCNQ0VAF6 134 aa5.27□□□□□ -1.57
HMGXB4-202ENST00000418170 Q8N377 158 aa5.27□□□□□ -1.57
HMGXB4-202ENST00000418170 NBEAL2Q6ZNJ1 2754 aa5.26□□□□□ -1.57
HMGXB4-202ENST00000418170 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
HMGXB4-202ENST00000418170 DSCR10P59022 87 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 PRR4Q16378 134 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 LYRM9A8MSI8 78 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 NDUFB1O75438 58 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 LYSTQ99698 3801 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 EGFEM1PQ0D2K5 195 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 Q5VV11 94 aa5.25□□□□□ -1.57
HMGXB4-202ENST00000418170 A8MU10 97 aa5.24□□□□□ -1.57
HMGXB4-202ENST00000418170 LELP1Q5T871 98 aa5.24□□□□□ -1.57
HMGXB4-202ENST00000418170 FBN1P35555 2871 aaKnown RBP5.24□□□□□ -1.57
HMGXB4-202ENST00000418170 CAMK2N2Q96S95 79 aa5.24□□□□□ -1.57
HMGXB4-202ENST00000418170 K7EQZ3 153 aa5.24□□□□□ -1.57
HMGXB4-202ENST00000418170 UBE2BP63146 152 aa5.24□□□□□ -1.57
HMGXB4-202ENST00000418170 Q8NBF4 154 aa5.24□□□□□ -1.57
HMGXB4-202ENST00000418170 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
HMGXB4-202ENST00000418170 CSMD3Q7Z407 3707 aa5.23□□□□□ -1.57
HMGXB4-202ENST00000418170 DNAJC9-AS1A6NH13 148 aa5.23□□□□□ -1.57
HMGXB4-202ENST00000418170 TNP2Q05952 138 aa5.23□□□□□ -1.57
HMGXB4-202ENST00000418170 NSD1Q96L73 2696 aaPredicted RBP5.23□□□□□ -1.57
HMGXB4-202ENST00000418170 SPRR4Q96PI1 79 aa5.23□□□□□ -1.57
HMGXB4-202ENST00000418170 SETD2Q9BYW2 2564 aaPredicted RBP5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 C1orf137Q5JT78 98 aa5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 KCNQ1DNQ9H478 68 aa5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 HCG22E2RYF7 251 aa5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 PKD1L1Q8TDX9 2849 aa5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 NAV2Q8IVL1 2488 aa5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 RETNQ9HD89 108 aa5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 LINC00588Q9Y4M8 146 aa5.22□□□□□ -1.57
HMGXB4-202ENST00000418170 UBE2AP49459 152 aa5.21□□□□□ -1.57
HMGXB4-202ENST00000418170 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.57
HMGXB4-202ENST00000418170 B9D2Q9BPU9 175 aa5.21□□□□□ -1.58
HMGXB4-202ENST00000418170 HIVEP1P15822 2718 aa5.21□□□□□ -1.58
HMGXB4-202ENST00000418170 MRPL55Q7Z7F7 128 aaKnown RBP5.21□□□□□ -1.58
HMGXB4-202ENST00000418170 DEFB4AO15263 64 aa5.2□□□□□ -1.58
HMGXB4-202ENST00000418170 PRB2P02812 416 aaPredicted RBP5.2□□□□□ -1.58
HMGXB4-202ENST00000418170 LIMD2Q9BT23 127 aa5.2□□□□□ -1.58
HMGXB4-202ENST00000418170 C16orf90A8MZG2 172 aa5.2□□□□□ -1.58
HMGXB4-202ENST00000418170 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
HMGXB4-202ENST00000418170 DHRS4-AS1Q9P1J3 65 aa5.2□□□□□ -1.58
HMGXB4-202ENST00000418170 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
HMGXB4-202ENST00000418170 MP68P56378 58 aa5.19□□□□□ -1.58
HMGXB4-202ENST00000418170 SONP18583 2426 aaKnown RBP5.19□□□□□ -1.58
HMGXB4-202ENST00000418170 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
HMGXB4-202ENST00000418170 Q6ZRX8 168 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 KRTAP26-1Q6PEX3 210 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 C15orf56Q8N910 161 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 NKAPP1Q8N9T2 125 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 C7orf33Q8WU49 177 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 LINC00208Q96KT6 92 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 Q9BRP9 147 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 RBM12B-AS1Q9P1G2 102 aa5.18□□□□□ -1.58
HMGXB4-202ENST00000418170 DEFB113Q30KQ7 82 aa5.17□□□□□ -1.58
HMGXB4-202ENST00000418170 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
HMGXB4-202ENST00000418170 DEFB135Q30KP9 77 aa5.17□□□□□ -1.58
HMGXB4-202ENST00000418170 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
HMGXB4-202ENST00000418170 PRR15LQ9BU68 103 aa5.17□□□□□ -1.58
HMGXB4-202ENST00000418170 DNAH7Q8WXX0 4024 aa5.16□□□□□ -1.58
HMGXB4-202ENST00000418170 SERTAD4-AS1Q5TG53 156 aa5.16□□□□□ -1.58
HMGXB4-202ENST00000418170 HTN3P15516 51 aa5.16□□□□□ -1.58
HMGXB4-202ENST00000418170 Q75L30 129 aa5.15□□□□□ -1.58
HMGXB4-202ENST00000418170 FASNP49327 2511 aaKnown RBP5.15□□□□□ -1.58
HMGXB4-202ENST00000418170 LCA10Q71F78 164 aa5.15□□□□□ -1.58
HMGXB4-202ENST00000418170 SPTSSBQ8NFR3 76 aa5.15□□□□□ -1.58
HMGXB4-202ENST00000418170 ACANP16112 2415 aa5.15□□□□□ -1.58
HMGXB4-202ENST00000418170 HECTD1Q9ULT8 2610 aa5.15□□□□□ -1.59
HMGXB4-202ENST00000418170 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
HMGXB4-202ENST00000418170 H3BPC8 53 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 NDUFS5O43920 106 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 SPRR1AP35321 89 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 PHF5AQ7RTV0 110 aaKnown RBP5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 IGKV2D-24A0A075B6R9 120 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 LOC101927531A0A1B0GV80 90 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 Q8NAQ8 132 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 A6NN06 94 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 DEFB116Q30KQ4 102 aa5.14□□□□□ -1.59
HMGXB4-202ENST00000418170 KRTAP29-1A8MX34 341 aaPredicted RBP5.13□□□□□ -1.59
HMGXB4-202ENST00000418170 SPART-AS1P0CW21 52 aa5.13□□□□□ -1.59
HMGXB4-202ENST00000418170 WFDC10BQ8IUB3 73 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms