RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZNF73O43830 326 aaPredicted RBP2.35□□□□□ -2.03
RTN4-208ENST00000404909 PLA2G2DQ9UNK4 145 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 UBE2BP63146 152 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 ATXN8Q156A1 80 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
RTN4-208ENST00000404909 FAM218AQ96MZ4 157 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 A0A087WYN8 130 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 SPACA4Q8TDM5 124 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 DIRC1Q969H9 104 aa2.35□□□□□ -2.03
RTN4-208ENST00000404909 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 IGLV5-37A0A075B6J1 123 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 DNAH8Q96JB1 4490 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 C9JAW5 83 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 H0YGX0 51 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 LST1O00453 97 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 HAMPP81172 84 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 LINC01600Q96MT4 127 aa2.34□□□□□ -2.03
RTN4-208ENST00000404909 SRRM2Q9UQ35 2752 aaKnown RBP2.34□□□□□ -2.04
RTN4-208ENST00000404909 DNAL4O96015 105 aa2.34□□□□□ -2.04
RTN4-208ENST00000404909 LINC00336Q6ZUF6 198 aa2.34□□□□□ -2.04
RTN4-208ENST00000404909 KCNQ1DNQ9H478 68 aa2.34□□□□□ -2.04
RTN4-208ENST00000404909 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.04
RTN4-208ENST00000404909 COX7BP24311 80 aa2.33□□□□□ -2.04
RTN4-208ENST00000404909 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
RTN4-208ENST00000404909 FAM30AQ9NZY2 134 aa2.33□□□□□ -2.04
RTN4-208ENST00000404909 ETDCA0A1B0GVM5 59 aa2.33□□□□□ -2.04
RTN4-208ENST00000404909 REG3GQ6UW15 175 aa2.33□□□□□ -2.04
RTN4-208ENST00000404909 SLC25A20O43772 301 aa2.33□□□□□ -2.04
RTN4-208ENST00000404909 KRTAP11-1Q8IUC1 163 aa2.33□□□□□ -2.04
RTN4-208ENST00000404909 PRYO14603 147 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 ELOF1P60002 83 aaKnown RBP2.32□□□□□ -2.04
RTN4-208ENST00000404909 hADV29S1A0JD25 119 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 F8W1H4 67 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 TRACP01848 142 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 LINC00575Q6W349 94 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 FAM19A1Q7Z5A9 133 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 DYNC1H1Q14204 4646 aaKnown RBP2.32□□□□□ -2.04
RTN4-208ENST00000404909 PRLHP81277 87 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 CIRBP-AS1Q8TBR5 109 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 PLAC8Q9NZF1 115 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 SMCPP49901 116 aaPredicted RBP2.32□□□□□ -2.04
RTN4-208ENST00000404909 C21orf62-AS1Q17RA5 79 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 ETDBQ3ZM63 59 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 SCXQ7RTU7 201 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 PRO0461Q9UI25 63 aa2.32□□□□□ -2.04
RTN4-208ENST00000404909 A0A1B0GV72 72 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 B5MCH6 92 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 BAALC-AS2P0C853 105 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 Q6ZQY7 126 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 Q6ZRX8 168 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 LINC00528Q8N1L1 170 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 ANKRD29Q8N6D5 301 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 HIGD2AQ9BW72 106 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 TRBV7-6A0A0J9YX20 115 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 KRTAP4-16G5E9R7 235 aaPredicted RBP2.31□□□□□ -2.04
RTN4-208ENST00000404909 SPRR1AP35321 89 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 UBE2AP49459 152 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 ORMDL1Q9P0S3 153 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 A0A1B0GVY2 172 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 DEFB105AQ8NG35 78 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 Q9BRP9 147 aa2.31□□□□□ -2.04
RTN4-208ENST00000404909 PSORS1C2Q9UIG4 136 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 A0A1B0GX51 115 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 EPM2AB3EWF7 344 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 C1orf137Q5JT78 98 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 Q6ZSA8 131 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 DHRS4-AS1Q9P1J3 65 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 H3BT86 120 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 ERC2-IT1O76042 136 aa2.3□□□□□ -2.04
RTN4-208ENST00000404909 BCE1O60756 84 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 ST20-AS1Q8NBB2 130 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 FAT1Q14517 4588 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 TEX49A0A1B0GTD5 131 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 INAFM2P0DMQ5 153 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 OCIAD2Q56VL3 154 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
RTN4-208ENST00000404909 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 LAMTOR3Q9UHA4 124 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 TMEM256-PLSCR3K7ERE1 68 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 TEN1Q86WV5 123 aa2.29□□□□□ -2.04
RTN4-208ENST00000404909 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
RTN4-208ENST00000404909 SMR3BP02814 79 aaPredicted RBP2.28□□□□□ -2.04
RTN4-208ENST00000404909 C3orf22Q8N5N4 141 aa2.28□□□□□ -2.04
RTN4-208ENST00000404909 GHRHP01286 108 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 GAGE2AQ6NT46 116 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 KRTAP17-1Q9BYP8 105 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
RTN4-208ENST00000404909 H0Y9J4 135 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 XGP55808 180 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 C4orf48Q5BLP8 95 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 Q8N377 158 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 ZNF861PO60384 105 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 KRTAP13-1Q8IUC0 172 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 PPDPFLQ8WWR9 84 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 FAM229AH3BQW9 127 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
RTN4-208ENST00000404909 NDUFV3P56181 108 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms