RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 IGKV2-28A0A075B6P5 120 aa10.03□□□□□ -0.8
COL25A1-201ENST00000399126 IGKV2D-28P01615 120 aa10.03□□□□□ -0.8
COL25A1-201ENST00000399126 J3QL48 77 aa10.03□□□□□ -0.8
COL25A1-201ENST00000399126 LINC00337Q8N6G1 96 aa10.02□□□□□ -0.8
COL25A1-201ENST00000399126 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.81
COL25A1-201ENST00000399126 C20orf197Q8N268 126 aa10.01□□□□□ -0.81
COL25A1-201ENST00000399126 KRTAP1-5Q9BYS1 174 aa10.01□□□□□ -0.81
COL25A1-201ENST00000399126 C6orf48Q9UBA6 75 aa10.01□□□□□ -0.81
COL25A1-201ENST00000399126 H7BZZ5 65 aa10□□□□□ -0.81
COL25A1-201ENST00000399126 BAALC-AS2P0C853 105 aa10□□□□□ -0.81
COL25A1-201ENST00000399126 PRR3P79522 188 aaKnown RBP10□□□□□ -0.81
COL25A1-201ENST00000399126 Q8NDZ9 215 aa10□□□□□ -0.81
COL25A1-201ENST00000399126 DNAL4O96015 105 aa10□□□□□ -0.81
COL25A1-201ENST00000399126 COX17Q14061 63 aa9.98□□□□□ -0.81
COL25A1-201ENST00000399126 CAMK2N2Q96S95 79 aa9.98□□□□□ -0.81
COL25A1-201ENST00000399126 UBE2DNLQ8IWF7 75 aa9.98□□□□□ -0.81
COL25A1-201ENST00000399126 LECT2O14960 151 aa9.97□□□□□ -0.81
COL25A1-201ENST00000399126 KMT2AQ03164 3969 aa9.96□□□□□ -0.82
COL25A1-201ENST00000399126 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.82
COL25A1-201ENST00000399126 C22orf24Q9Y442 160 aa9.96□□□□□ -0.82
COL25A1-201ENST00000399126 KRTAP21-3Q3LHN1 58 aa9.95□□□□□ -0.82
COL25A1-201ENST00000399126 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
COL25A1-201ENST00000399126 GVQW2A0A096LPI5 108 aaPredicted RBP9.94□□□□□ -0.82
COL25A1-201ENST00000399126 TRBV7-6A0A0J9YX20 115 aa9.94□□□□□ -0.82
COL25A1-201ENST00000399126 CCKP06307 115 aa9.94□□□□□ -0.82
COL25A1-201ENST00000399126 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
COL25A1-201ENST00000399126 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
COL25A1-201ENST00000399126 RBM3P98179 157 aaKnown RBP9.93□□□□□ -0.82
COL25A1-201ENST00000399126 LINC00846Q9NV44 126 aa9.93□□□□□ -0.82
COL25A1-201ENST00000399126 SLPIP03973 132 aa9.92□□□□□ -0.82
COL25A1-201ENST00000399126 NCR3O14931 201 aa9.92□□□□□ -0.82
COL25A1-201ENST00000399126 ATP5EP56381 51 aaPredicted RBP9.92□□□□□ -0.82
COL25A1-201ENST00000399126 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
COL25A1-201ENST00000399126 LAMTOR3Q9UHA4 124 aa9.91□□□□□ -0.82
COL25A1-201ENST00000399126 DNAH2Q9P225 4427 aa9.9□□□□□ -0.82
COL25A1-201ENST00000399126 KLKP1Q107X0 134 aa9.9□□□□□ -0.82
COL25A1-201ENST00000399126 KTN1-AS1Q86SY8 53 aa9.9□□□□□ -0.82
COL25A1-201ENST00000399126 RPL28P46779 137 aaKnown RBP9.89□□□□□ -0.83
COL25A1-201ENST00000399126 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
COL25A1-201ENST00000399126 ATP5EP2Q5VTU8 51 aa9.89□□□□□ -0.83
COL25A1-201ENST00000399126 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
COL25A1-201ENST00000399126 BCE1O60756 84 aa9.89□□□□□ -0.83
COL25A1-201ENST00000399126 FAM218AQ96MZ4 157 aa9.89□□□□□ -0.83
COL25A1-201ENST00000399126 Q6ZRP5 223 aa9.88□□□□□ -0.83
COL25A1-201ENST00000399126 RMI2Q96E14 147 aa9.88□□□□□ -0.83
COL25A1-201ENST00000399126 TRAV7A0A075B6U4 112 aa9.88□□□□□ -0.83
COL25A1-201ENST00000399126 S100A7L2Q5SY68 101 aa9.88□□□□□ -0.83
COL25A1-201ENST00000399126 F8WEM9 126 aa9.85□□□□□ -0.83
COL25A1-201ENST00000399126 NDUFC1O43677 76 aa9.85□□□□□ -0.83
COL25A1-201ENST00000399126 C14orf132Q9NPU4 83 aa9.85□□□□□ -0.83
COL25A1-201ENST00000399126 MUC7Q8TAX7 377 aa9.84□□□□□ -0.83
COL25A1-201ENST00000399126 M0R378 163 aa9.83□□□□□ -0.84
COL25A1-201ENST00000399126 NBDYA0A0U1RRE5 68 aa9.83□□□□□ -0.84
COL25A1-201ENST00000399126 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
COL25A1-201ENST00000399126 MPLKIPQ8TAP9 179 aa9.83□□□□□ -0.84
COL25A1-201ENST00000399126 OBSCN-AS1Q96MR7 158 aa9.83□□□□□ -0.84
COL25A1-201ENST00000399126 M0R2N4 97 aa9.82□□□□□ -0.84
COL25A1-201ENST00000399126 PSCAO43653 123 aa9.82□□□□□ -0.84
COL25A1-201ENST00000399126 A0A087WYN8 130 aa9.82□□□□□ -0.84
COL25A1-201ENST00000399126 TRBV10-3A0A0K0K1G6 114 aa9.81□□□□□ -0.84
COL25A1-201ENST00000399126 A8MUN3 132 aa9.81□□□□□ -0.84
COL25A1-201ENST00000399126 PLA2G2DQ9UNK4 145 aa9.8□□□□□ -0.84
COL25A1-201ENST00000399126 TNP2Q05952 138 aa9.79□□□□□ -0.84
COL25A1-201ENST00000399126 SNURFQ9Y675 71 aa9.79□□□□□ -0.84
COL25A1-201ENST00000399126 ZNF73O43830 326 aaPredicted RBP9.79□□□□□ -0.84
COL25A1-201ENST00000399126 IGLV6-57P01721 117 aa9.78□□□□□ -0.84
COL25A1-201ENST00000399126 C6orf99Q4VX62 202 aa9.78□□□□□ -0.84
COL25A1-201ENST00000399126 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.78□□□□□ -0.84
COL25A1-201ENST00000399126 FAM168BA1KXE4 195 aa9.77□□□□□ -0.85
COL25A1-201ENST00000399126 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.85
COL25A1-201ENST00000399126 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
COL25A1-201ENST00000399126 TMEM256-PLSCR3K7ERE1 68 aa9.76□□□□□ -0.85
COL25A1-201ENST00000399126 FAM229BQ4G0N7 80 aa9.76□□□□□ -0.85
COL25A1-201ENST00000399126 Q6ZRN7 208 aaPredicted RBP9.76□□□□□ -0.85
COL25A1-201ENST00000399126 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
COL25A1-201ENST00000399126 Q75L30 129 aa9.75□□□□□ -0.85
COL25A1-201ENST00000399126 NDUFS5O43920 106 aa9.74□□□□□ -0.85
COL25A1-201ENST00000399126 H0YGX0 51 aa9.74□□□□□ -0.85
COL25A1-201ENST00000399126 LRCOL1A6NCL2 159 aa9.73□□□□□ -0.85
COL25A1-201ENST00000399126 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
COL25A1-201ENST00000399126 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
COL25A1-201ENST00000399126 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
COL25A1-201ENST00000399126 CNBPP62633 177 aaKnown RBP9.7□□□□□ -0.86
COL25A1-201ENST00000399126 C7orf33Q8WU49 177 aa9.69□□□□□ -0.86
COL25A1-201ENST00000399126 DNAH6Q9C0G6 4158 aa9.69□□□□□ -0.86
COL25A1-201ENST00000399126 A0A096LNI7 61 aa9.69□□□□□ -0.86
COL25A1-201ENST00000399126 IGKV2-24A0A0C4DH68 120 aa9.69□□□□□ -0.86
COL25A1-201ENST00000399126 LINC00313P59037 77 aa9.69□□□□□ -0.86
COL25A1-201ENST00000399126 NKAPP1Q8N9T2 125 aa9.69□□□□□ -0.86
COL25A1-201ENST00000399126 FUSP35637 526 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL25A1-201ENST00000399126 UBL5Q9BZL1 73 aa9.68□□□□□ -0.86
COL25A1-201ENST00000399126 LY6G6CO95867 125 aa9.68□□□□□ -0.86
COL25A1-201ENST00000399126 Q8N814 137 aa9.68□□□□□ -0.86
COL25A1-201ENST00000399126 ALMS1Q8TCU4 4167 aa9.67□□□□□ -0.86
COL25A1-201ENST00000399126 RPL37AP8A6NKH3 93 aa9.67□□□□□ -0.86
COL25A1-201ENST00000399126 Q6ZR54 194 aa9.67□□□□□ -0.86
COL25A1-201ENST00000399126 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
COL25A1-201ENST00000399126 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
COL25A1-201ENST00000399126 WWC2-AS2Q96NR7 200 aa9.67□□□□□ -0.86
COL25A1-201ENST00000399126 CHTF8P0CG12 524 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms