RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TRAV23DV6A0A075B6W5 121 aa15.15■□□□□ 0.02
TSPAN4-207ENST00000397411 JOSD1Q15040 202 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-207ENST00000397411 MUSTN1Q8IVN3 82 aa15.14■□□□□ 0.01
TSPAN4-207ENST00000397411 CRYGAP11844 174 aa15.13■□□□□ 0.01
TSPAN4-207ENST00000397411 PPDPFQ9H3Y8 114 aa15.13■□□□□ 0.01
TSPAN4-207ENST00000397411 VAMP8Q9BV40 100 aa15.12■□□□□ 0.01
TSPAN4-207ENST00000397411 KRTAP4-16G5E9R7 235 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-207ENST00000397411 HINT1P49773 126 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-207ENST00000397411 SMCR5Q8TEV8 140 aa15.11■□□□□ 0.01
TSPAN4-207ENST00000397411 ANAPC11Q9NYG5 84 aa15.11■□□□□ 0.01
TSPAN4-207ENST00000397411 B5MCH6 92 aa15.1■□□□□ 0.01
TSPAN4-207ENST00000397411 ZNF73O43830 326 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-207ENST00000397411 ZNF706Q9Y5V0 76 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-207ENST00000397411 TNXBP22105 4242 aa15.07■□□□□ 0
TSPAN4-207ENST00000397411 COX8AP10176 69 aa15.06■□□□□ 0
TSPAN4-207ENST00000397411 FAM229BQ4G0N7 80 aa15.06■□□□□ 0
TSPAN4-207ENST00000397411 SPATA45Q537H7 98 aa15.06■□□□□ 0
TSPAN4-207ENST00000397411 TYMSOSQ8TAI1 123 aa15.06■□□□□ 0
TSPAN4-207ENST00000397411 PAM16Q9Y3D7 125 aa15.06■□□□□ 0
TSPAN4-207ENST00000397411 A0A087X002 238 aa15.05■□□□□ -0
TSPAN4-207ENST00000397411 A6NDN8 102 aa15.05■□□□□ -0
TSPAN4-207ENST00000397411 DLEU1O43261 78 aa15.04■□□□□ -0
TSPAN4-207ENST00000397411 Q6ZRX8 168 aa15.04■□□□□ -0
TSPAN4-207ENST00000397411 C14orf144Q96I85 54 aa15.02■□□□□ -0
TSPAN4-207ENST00000397411 SPRR4Q96PI1 79 aa15.02■□□□□ -0
TSPAN4-207ENST00000397411 HIST1H4GQ99525 98 aa15□□□□□ -0.01
TSPAN4-207ENST00000397411 TRAV13-2A0A0B4J235 113 aa14.98□□□□□ -0.01
TSPAN4-207ENST00000397411 SLC25A34Q6PIV7 304 aa14.98□□□□□ -0.01
TSPAN4-207ENST00000397411 Q9BRP9 147 aa14.98□□□□□ -0.01
TSPAN4-207ENST00000397411 PYY3Q5JQD4 70 aa14.97□□□□□ -0.01
TSPAN4-207ENST00000397411 ERC2-IT1O76042 136 aa14.96□□□□□ -0.01
TSPAN4-207ENST00000397411 GAGE2AQ6NT46 116 aa14.96□□□□□ -0.01
TSPAN4-207ENST00000397411 COX7BP24311 80 aa14.95□□□□□ -0.02
TSPAN4-207ENST00000397411 C6orf99Q4VX62 202 aa14.95□□□□□ -0.02
TSPAN4-207ENST00000397411 KRTAP13-2Q52LG2 175 aa14.95□□□□□ -0.02
TSPAN4-207ENST00000397411 A4D1N5 150 aa14.94□□□□□ -0.02
TSPAN4-207ENST00000397411 HIGD1BQ9P298 99 aa14.92□□□□□ -0.02
TSPAN4-207ENST00000397411 DHRS4-AS1Q9P1J3 65 aa14.91□□□□□ -0.02
TSPAN4-207ENST00000397411 TSPAN13O95857 204 aa14.9□□□□□ -0.02
TSPAN4-207ENST00000397411 C3orf22Q8N5N4 141 aa14.89□□□□□ -0.03
TSPAN4-207ENST00000397411 ELOF1P60002 83 aaKnown RBP14.88□□□□□ -0.03
TSPAN4-207ENST00000397411 TRBV7-6A0A0J9YX20 115 aa14.86□□□□□ -0.03
TSPAN4-207ENST00000397411 LINC00483Q53H64 154 aa14.86□□□□□ -0.03
TSPAN4-207ENST00000397411 LINC00304Q8N9R0 145 aa14.86□□□□□ -0.03
TSPAN4-207ENST00000397411 A0A1B0GWB2 263 aa14.85□□□□□ -0.03
TSPAN4-207ENST00000397411 SMIM11BQ8TCY0 68 aa14.85□□□□□ -0.03
TSPAN4-207ENST00000397411 ST20-AS1Q8NBB2 130 aa14.84□□□□□ -0.03
TSPAN4-207ENST00000397411 C12orf57Q99622 126 aa14.84□□□□□ -0.03
TSPAN4-207ENST00000397411 VAMP3Q15836 100 aa14.83□□□□□ -0.04
TSPAN4-207ENST00000397411 TAL2Q16559 108 aa14.83□□□□□ -0.04
TSPAN4-207ENST00000397411 IGLV9-49A0A0B4J1Y8 123 aa14.81□□□□□ -0.04
TSPAN4-207ENST00000397411 C4orf48Q5BLP8 95 aa14.81□□□□□ -0.04
TSPAN4-207ENST00000397411 C2orf91Q6ZV80 131 aa14.8□□□□□ -0.04
TSPAN4-207ENST00000397411 TMEM238LA0A1B0GVL6 79 aa14.78□□□□□ -0.04
TSPAN4-207ENST00000397411 A6NJY4 79 aa14.78□□□□□ -0.04
TSPAN4-207ENST00000397411 RAB37Q96AX2 223 aa14.78□□□□□ -0.04
TSPAN4-207ENST00000397411 DEFB105AQ8NG35 78 aa14.76□□□□□ -0.05
TSPAN4-207ENST00000397411 NHP2Q9NX24 153 aaKnown RBP14.76□□□□□ -0.05
TSPAN4-207ENST00000397411 UQCR10Q9UDW1 63 aa14.76□□□□□ -0.05
TSPAN4-207ENST00000397411 MOBPQ13875 183 aa14.75□□□□□ -0.05
TSPAN4-207ENST00000397411 SPAG11AQ6PDA7 123 aa14.75□□□□□ -0.05
TSPAN4-207ENST00000397411 Q8NBF4 154 aa14.75□□□□□ -0.05
TSPAN4-207ENST00000397411 HMCN2Q8NDA2 5059 aa14.74□□□□□ -0.05
TSPAN4-207ENST00000397411 H7C2G1 150 aa14.74□□□□□ -0.05
TSPAN4-207ENST00000397411 SLC25A20O43772 301 aa14.74□□□□□ -0.05
TSPAN4-207ENST00000397411 PRR4Q16378 134 aa14.74□□□□□ -0.05
TSPAN4-207ENST00000397411 C9orf153Q5TBE3 101 aa14.74□□□□□ -0.05
TSPAN4-207ENST00000397411 CEND1Q8N111 149 aa14.74□□□□□ -0.05
TSPAN4-207ENST00000397411 SMIM6P0DI80 62 aa14.73□□□□□ -0.05
TSPAN4-207ENST00000397411 SSBP3-AS1Q7Z2R9 100 aa14.73□□□□□ -0.05
TSPAN4-207ENST00000397411 CFC1BP0CG36 223 aa14.72□□□□□ -0.05
TSPAN4-207ENST00000397411 CFC1P0CG37 223 aa14.72□□□□□ -0.05
TSPAN4-207ENST00000397411 LAMTOR3Q9UHA4 124 aa14.71□□□□□ -0.05
TSPAN4-207ENST00000397411 HSD52Q0P140 79 aa14.7□□□□□ -0.06
TSPAN4-207ENST00000397411 SPRR1BP22528 89 aa14.69□□□□□ -0.06
TSPAN4-207ENST00000397411 A0A0B4J2C4 111 aa14.68□□□□□ -0.06
TSPAN4-207ENST00000397411 TEX49A0A1B0GTD5 131 aa14.68□□□□□ -0.06
TSPAN4-207ENST00000397411 CTAG1AP78358 180 aa14.68□□□□□ -0.06
TSPAN4-207ENST00000397411 BVES-AS1Q5T3Y7 98 aa14.66□□□□□ -0.06
TSPAN4-207ENST00000397411 LINC00575Q6W349 94 aa14.65□□□□□ -0.06
TSPAN4-207ENST00000397411 Q1RN00 199 aa14.64□□□□□ -0.07
TSPAN4-207ENST00000397411 hADV29S1A0JD25 119 aa14.63□□□□□ -0.07
TSPAN4-207ENST00000397411 SPINK1P00995 79 aa14.62□□□□□ -0.07
TSPAN4-207ENST00000397411 FXYD2P54710 66 aa14.62□□□□□ -0.07
TSPAN4-207ENST00000397411 PRO1854Q9UHT4 67 aa14.61□□□□□ -0.07
TSPAN4-207ENST00000397411 RETNLBQ9BQ08 111 aa14.6□□□□□ -0.07
TSPAN4-207ENST00000397411 IGLV5-48A0A075B6I7 105 aa14.58□□□□□ -0.08
TSPAN4-207ENST00000397411 SNCGO76070 127 aa14.58□□□□□ -0.08
TSPAN4-207ENST00000397411 LINC01547P58512 204 aaPredicted RBP14.55□□□□□ -0.08
TSPAN4-207ENST00000397411 PRO1933Q9H354 126 aa14.55□□□□□ -0.08
TSPAN4-207ENST00000397411 LOC105371267A0A1B0GV96 52 aa14.54□□□□□ -0.08
TSPAN4-207ENST00000397411 H0YGX0 51 aa14.54□□□□□ -0.08
TSPAN4-207ENST00000397411 Q6ZQY7 126 aa14.54□□□□□ -0.08
TSPAN4-207ENST00000397411 Q8N377 158 aa14.54□□□□□ -0.08
TSPAN4-207ENST00000397411 SMIM29Q86T20 159 aa14.52□□□□□ -0.09
TSPAN4-207ENST00000397411 TSTD3H0UI37 97 aa14.51□□□□□ -0.09
TSPAN4-207ENST00000397411 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.51□□□□□ -0.09
TSPAN4-207ENST00000397411 HRCT1Q6UXD1 115 aa14.5□□□□□ -0.09
TSPAN4-207ENST00000397411 F8WEM9 126 aa14.49□□□□□ -0.09
TSPAN4-207ENST00000397411 IGLV7-46A0A075B6I9 117 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms