RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
VTI1A-201ENST00000393077 ZNF702PQ9H963 129 aa5.23□□□□□ -1.57
VTI1A-201ENST00000393077 INAFM1C9JVW0 142 aa5.22□□□□□ -1.57
VTI1A-201ENST00000393077 CAMK2N2Q96S95 79 aa5.22□□□□□ -1.57
VTI1A-201ENST00000393077 CMC4P56277 68 aaPredicted RBP5.22□□□□□ -1.57
VTI1A-201ENST00000393077 TEP1Q99973 2627 aaKnown RBP5.22□□□□□ -1.57
VTI1A-201ENST00000393077 ZFHX3Q15911 3703 aa5.21□□□□□ -1.57
VTI1A-201ENST00000393077 IGLV1-40P01703 118 aa5.21□□□□□ -1.57
VTI1A-201ENST00000393077 C4orf3Q8WVX3 66 aa5.21□□□□□ -1.58
VTI1A-201ENST00000393077 C1orf137Q5JT78 98 aa5.21□□□□□ -1.58
VTI1A-201ENST00000393077 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
VTI1A-201ENST00000393077 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
VTI1A-201ENST00000393077 ZFHX4Q86UP3 3567 aa5.2□□□□□ -1.58
VTI1A-201ENST00000393077 A8MU10 97 aa5.2□□□□□ -1.58
VTI1A-201ENST00000393077 PCOTHQ58A44 107 aa5.2□□□□□ -1.58
VTI1A-201ENST00000393077 UNQ6190/PRO20217Q6UXQ8 127 aa5.2□□□□□ -1.58
VTI1A-201ENST00000393077 C16orf74Q96GX8 76 aa5.2□□□□□ -1.58
VTI1A-201ENST00000393077 REG3AQ06141 175 aa5.19□□□□□ -1.58
VTI1A-201ENST00000393077 KPRPQ5T749 579 aaPredicted RBP5.19□□□□□ -1.58
VTI1A-201ENST00000393077 H0Y9J4 135 aa5.19□□□□□ -1.58
VTI1A-201ENST00000393077 DEFB114Q30KQ6 69 aa5.19□□□□□ -1.58
VTI1A-201ENST00000393077 COA5Q86WW8 74 aa5.19□□□□□ -1.58
VTI1A-201ENST00000393077 MAP6D1Q9H9H5 199 aa5.19□□□□□ -1.58
VTI1A-201ENST00000393077 Q75L30 129 aa5.19□□□□□ -1.58
VTI1A-201ENST00000393077 RELNP78509 3460 aa5.18□□□□□ -1.58
VTI1A-201ENST00000393077 CDK2AP2O75956 126 aa5.18□□□□□ -1.58
VTI1A-201ENST00000393077 ST20-AS1Q8NBB2 130 aa5.18□□□□□ -1.58
VTI1A-201ENST00000393077 A0A096LNT2 108 aa5.18□□□□□ -1.58
VTI1A-201ENST00000393077 CYSRT1A8MQ03 144 aa5.17□□□□□ -1.58
VTI1A-201ENST00000393077 LINC00313P59037 77 aa5.17□□□□□ -1.58
VTI1A-201ENST00000393077 UNC79Q9P2D8 2635 aa5.17□□□□□ -1.58
VTI1A-201ENST00000393077 MGAM2Q2M2H8 2515 aa5.16□□□□□ -1.58
VTI1A-201ENST00000393077 DEFB4AO15263 64 aa5.16□□□□□ -1.58
VTI1A-201ENST00000393077 GCN1Q92616 2671 aaKnown RBP5.16□□□□□ -1.58
VTI1A-201ENST00000393077 MAST4O15021 2626 aa5.16□□□□□ -1.58
VTI1A-201ENST00000393077 PRR26Q8N8Z3 221 aa5.16□□□□□ -1.58
VTI1A-201ENST00000393077 CR1P17927 2039 aa5.15□□□□□ -1.58
VTI1A-201ENST00000393077 H3BPC8 53 aa5.15□□□□□ -1.58
VTI1A-201ENST00000393077 MOBPQ13875 183 aa5.15□□□□□ -1.58
VTI1A-201ENST00000393077 A6NN06 94 aa5.15□□□□□ -1.59
VTI1A-201ENST00000393077 TEX15Q9BXT5 2789 aa5.15□□□□□ -1.59
VTI1A-201ENST00000393077 K7EQZ3 153 aa5.15□□□□□ -1.59
VTI1A-201ENST00000393077 ITPR1Q14643 2758 aa5.15□□□□□ -1.59
VTI1A-201ENST00000393077 DEFB135Q30KP9 77 aa5.14□□□□□ -1.59
VTI1A-201ENST00000393077 A0A1B0GW54 56 aa5.14□□□□□ -1.59
VTI1A-201ENST00000393077 KIAA0087Q14695 138 aa5.13□□□□□ -1.59
VTI1A-201ENST00000393077 SPANXA2-OT1Q8N9U9 137 aa5.13□□□□□ -1.59
VTI1A-201ENST00000393077 DHRS4-AS1Q9P1J3 65 aa5.13□□□□□ -1.59
VTI1A-201ENST00000393077 PRO0255Q9UI72 69 aa5.12□□□□□ -1.59
VTI1A-201ENST00000393077 ZANQ9Y493 2812 aa5.12□□□□□ -1.59
VTI1A-201ENST00000393077 IGLV6-57P01721 117 aa5.12□□□□□ -1.59
VTI1A-201ENST00000393077 Q9BRP9 147 aa5.12□□□□□ -1.59
VTI1A-201ENST00000393077 ITPR2Q14571 2701 aa5.12□□□□□ -1.59
VTI1A-201ENST00000393077 CRYBG3Q68DQ2 2970 aa5.11□□□□□ -1.59
VTI1A-201ENST00000393077 KLK9Q2XQG4 91 aa5.11□□□□□ -1.59
VTI1A-201ENST00000393077 Q8NBF4 154 aa5.11□□□□□ -1.59
VTI1A-201ENST00000393077 ASH1LQ9NR48 2969 aaKnown RBP5.11□□□□□ -1.59
VTI1A-201ENST00000393077 ODF3L2Q3SX64 289 aa5.1□□□□□ -1.59
VTI1A-201ENST00000393077 UTP20O75691 2785 aaKnown RBP5.1□□□□□ -1.59
VTI1A-201ENST00000393077 A0A087WSZ3 146 aa5.1□□□□□ -1.59
VTI1A-201ENST00000393077 A0A1B0GUV1 79 aa5.09□□□□□ -1.59
VTI1A-201ENST00000393077 UBR5O95071 2799 aaPredicted RBP5.09□□□□□ -1.59
VTI1A-201ENST00000393077 IGHV4-30-4P0DP06 118 aa5.08□□□□□ -1.6
VTI1A-201ENST00000393077 A0A1B0GU69 56 aa5.08□□□□□ -1.6
VTI1A-201ENST00000393077 DCHS2Q6V1P9 2916 aa5.07□□□□□ -1.6
VTI1A-201ENST00000393077 KCNQ1DNQ9H478 68 aa5.07□□□□□ -1.6
VTI1A-201ENST00000393077 STAB1Q9NY15 2570 aa5.07□□□□□ -1.6
VTI1A-201ENST00000393077 RPL37AP8A6NKH3 93 aa5.06□□□□□ -1.6
VTI1A-201ENST00000393077 SPINK7P58062 85 aa5.06□□□□□ -1.6
VTI1A-201ENST00000393077 IGKV2D-24A0A075B6R9 120 aa5.06□□□□□ -1.6
VTI1A-201ENST00000393077 LINC00612Q8N6U2 182 aa5.06□□□□□ -1.6
VTI1A-201ENST00000393077 SPART-AS1P0CW21 52 aa5.05□□□□□ -1.6
VTI1A-201ENST00000393077 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
VTI1A-201ENST00000393077 A0A096LNI7 61 aa5.05□□□□□ -1.6
VTI1A-201ENST00000393077 COL6A5A8TX70 2615 aa5.05□□□□□ -1.6
VTI1A-201ENST00000393077 EGFEM1PQ0D2K5 195 aa5.05□□□□□ -1.6
VTI1A-201ENST00000393077 HRNRQ86YZ3 2850 aaPredicted RBP5.05□□□□□ -1.6
VTI1A-201ENST00000393077 LINC00528Q8N1L1 170 aa5.04□□□□□ -1.6
VTI1A-201ENST00000393077 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
VTI1A-201ENST00000393077 SETXQ7Z333 2677 aaKnown RBP5.04□□□□□ -1.6
VTI1A-201ENST00000393077 IGLV1-51P01701 117 aa5.04□□□□□ -1.6
VTI1A-201ENST00000393077 C1orf134Q5TEV5 83 aa5.04□□□□□ -1.6
VTI1A-201ENST00000393077 RPL37AP61513 92 aaKnown RBP5.04□□□□□ -1.6
VTI1A-201ENST00000393077 CELSR2Q9HCU4 2923 aa5.03□□□□□ -1.6
VTI1A-201ENST00000393077 NOTCH1P46531 2555 aa5.03□□□□□ -1.6
VTI1A-201ENST00000393077 Q8NAQ8 132 aa5.03□□□□□ -1.6
VTI1A-201ENST00000393077 LINC00476Q8WZB0 136 aa5.03□□□□□ -1.6
VTI1A-201ENST00000393077 A0A1W2PNM2 257 aa5.03□□□□□ -1.6
VTI1A-201ENST00000393077 DSCR10P59022 87 aa5.02□□□□□ -1.61
VTI1A-201ENST00000393077 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
VTI1A-201ENST00000393077 C6orf48Q9UBA6 75 aa5.02□□□□□ -1.61
VTI1A-201ENST00000393077 APCP25054 2843 aa5.01□□□□□ -1.61
VTI1A-201ENST00000393077 UBE2DNLQ8IWF7 75 aa5.01□□□□□ -1.61
VTI1A-201ENST00000393077 Q8N377 158 aa5.01□□□□□ -1.61
VTI1A-201ENST00000393077 KRTAP1-3Q8IUG1 177 aa5.01□□□□□ -1.61
VTI1A-201ENST00000393077 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
VTI1A-201ENST00000393077 UQCR11O14957 56 aa5□□□□□ -1.61
VTI1A-201ENST00000393077 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
VTI1A-201ENST00000393077 NBEAL2Q6ZNJ1 2754 aa5□□□□□ -1.61
VTI1A-201ENST00000393077 NF1P21359 2839 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms