RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 LINC00313P59037 77 aa12.92□□□□□ -0.34
PCDH8-202ENST00000377942 C9orf129Q5T035 196 aaKnown RBP12.91□□□□□ -0.34
PCDH8-202ENST00000377942 C5orf42Q9H799 3197 aa12.9□□□□□ -0.34
PCDH8-202ENST00000377942 EIF4EBP3O60516 100 aaPredicted RBP12.9□□□□□ -0.35
PCDH8-202ENST00000377942 ZNF861PO60384 105 aa12.89□□□□□ -0.35
PCDH8-202ENST00000377942 MAST4O15021 2626 aa12.89□□□□□ -0.35
PCDH8-202ENST00000377942 CNBPP62633 177 aaKnown RBP12.89□□□□□ -0.35
PCDH8-202ENST00000377942 LINC00336Q6ZUF6 198 aa12.88□□□□□ -0.35
PCDH8-202ENST00000377942 SPINK1P00995 79 aa12.88□□□□□ -0.35
PCDH8-202ENST00000377942 C8orf87E5RJ46 101 aa12.88□□□□□ -0.35
PCDH8-202ENST00000377942 ZNF575Q86XF7 245 aa12.87□□□□□ -0.35
PCDH8-202ENST00000377942 SSBP3-AS1Q7Z2R9 100 aa12.87□□□□□ -0.35
PCDH8-202ENST00000377942 RANBP2P49792 3224 aaKnown RBP12.86□□□□□ -0.35
PCDH8-202ENST00000377942 CENPEQ02224 2701 aa12.85□□□□□ -0.35
PCDH8-202ENST00000377942 BPTFQ12830 3046 aa12.85□□□□□ -0.35
PCDH8-202ENST00000377942 A8MWP4 228 aa12.84□□□□□ -0.35
PCDH8-202ENST00000377942 TRAV22A0A0B4J277 110 aa12.83□□□□□ -0.36
PCDH8-202ENST00000377942 A0A0U1RQV1 116 aa12.81□□□□□ -0.36
PCDH8-202ENST00000377942 C7orf65Q6ZTY9 151 aa12.8□□□□□ -0.36
PCDH8-202ENST00000377942 SPAG11AQ6PDA7 123 aa12.8□□□□□ -0.36
PCDH8-202ENST00000377942 ACYP2P14621 99 aa12.8□□□□□ -0.36
PCDH8-202ENST00000377942 IGFL1Q6UW32 110 aa12.79□□□□□ -0.36
PCDH8-202ENST00000377942 Q8N377 158 aa12.78□□□□□ -0.36
PCDH8-202ENST00000377942 CR1P17927 2039 aa12.77□□□□□ -0.37
PCDH8-202ENST00000377942 CASC10Q5T4H9 136 aa12.77□□□□□ -0.37
PCDH8-202ENST00000377942 A0A1W2PNN7 141 aa12.74□□□□□ -0.37
PCDH8-202ENST00000377942 Q96NJ1 140 aa12.74□□□□□ -0.37
PCDH8-202ENST00000377942 MRPL34Q9BQ48 92 aaKnown RBP12.74□□□□□ -0.37
PCDH8-202ENST00000377942 IGLV5-37A0A075B6J1 123 aa12.73□□□□□ -0.37
PCDH8-202ENST00000377942 LOC101927531A0A1B0GV80 90 aa12.73□□□□□ -0.37
PCDH8-202ENST00000377942 IGLV7-43P04211 117 aa12.73□□□□□ -0.37
PCDH8-202ENST00000377942 LINC00304Q8N9R0 145 aa12.72□□□□□ -0.37
PCDH8-202ENST00000377942 J3QL48 77 aa12.71□□□□□ -0.37
PCDH8-202ENST00000377942 ATP11AUNQ6ZP68 121 aa12.71□□□□□ -0.37
PCDH8-202ENST00000377942 K7EQZ3 153 aa12.7□□□□□ -0.38
PCDH8-202ENST00000377942 PSORS1C2Q9UIG4 136 aa12.69□□□□□ -0.38
PCDH8-202ENST00000377942 PCNTO95613 3336 aa12.69□□□□□ -0.38
PCDH8-202ENST00000377942 PSPHP1O15172 72 aa12.69□□□□□ -0.38
PCDH8-202ENST00000377942 ERC2-IT1O76042 136 aa12.66□□□□□ -0.38
PCDH8-202ENST00000377942 PRR15Q8IV56 129 aa12.66□□□□□ -0.38
PCDH8-202ENST00000377942 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
PCDH8-202ENST00000377942 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
PCDH8-202ENST00000377942 MGAQ8IWI9 3026 aa12.62□□□□□ -0.39
PCDH8-202ENST00000377942 A0A1B0GU69 56 aa12.61□□□□□ -0.39
PCDH8-202ENST00000377942 A0A1B0GVX0 72 aa12.61□□□□□ -0.39
PCDH8-202ENST00000377942 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
PCDH8-202ENST00000377942 C1orf195Q5TG92 126 aa12.6□□□□□ -0.39
PCDH8-202ENST00000377942 PMAIP1Q13794 54 aa12.58□□□□□ -0.4
PCDH8-202ENST00000377942 RPS28P62857 69 aaKnown RBP12.58□□□□□ -0.4
PCDH8-202ENST00000377942 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
PCDH8-202ENST00000377942 TNP2Q05952 138 aa12.55□□□□□ -0.4
PCDH8-202ENST00000377942 DSCR10P59022 87 aa12.54□□□□□ -0.4
PCDH8-202ENST00000377942 IGLV5-48A0A075B6I7 105 aa12.52□□□□□ -0.4
PCDH8-202ENST00000377942 ANAPC11Q9NYG5 84 aa12.52□□□□□ -0.4
PCDH8-202ENST00000377942 LAMA3Q16787 3333 aa12.52□□□□□ -0.41
PCDH8-202ENST00000377942 TEP1Q99973 2627 aaKnown RBP12.52□□□□□ -0.41
PCDH8-202ENST00000377942 A0A1W2PNM2 257 aa12.51□□□□□ -0.41
PCDH8-202ENST00000377942 UNC79Q9P2D8 2635 aa12.51□□□□□ -0.41
PCDH8-202ENST00000377942 A0A0G2JQZ4 141 aa12.48□□□□□ -0.41
PCDH8-202ENST00000377942 IGSF10Q6WRI0 2623 aa12.47□□□□□ -0.41
PCDH8-202ENST00000377942 OBSCN-AS1Q96MR7 158 aa12.47□□□□□ -0.41
PCDH8-202ENST00000377942 AKAP13Q12802 2813 aa12.47□□□□□ -0.41
PCDH8-202ENST00000377942 MKI67P46013 3256 aaKnown RBP12.47□□□□□ -0.41
PCDH8-202ENST00000377942 PRO0628Q9UI54 55 aa12.46□□□□□ -0.42
PCDH8-202ENST00000377942 C4orf26Q17RF5 130 aa12.44□□□□□ -0.42
PCDH8-202ENST00000377942 TEX15Q9BXT5 2789 aa12.43□□□□□ -0.42
PCDH8-202ENST00000377942 LINC01600Q96MT4 127 aa12.42□□□□□ -0.42
PCDH8-202ENST00000377942 CD164Q04900 197 aa12.42□□□□□ -0.42
PCDH8-202ENST00000377942 COL6A5A8TX70 2615 aa12.42□□□□□ -0.42
PCDH8-202ENST00000377942 STAB1Q9NY15 2570 aa12.42□□□□□ -0.42
PCDH8-202ENST00000377942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
PCDH8-202ENST00000377942 KLKP1Q107X0 134 aa12.4□□□□□ -0.42
PCDH8-202ENST00000377942 DSPP15924 2871 aaKnown RBP12.39□□□□□ -0.43
PCDH8-202ENST00000377942 C9orf92A6NGG3 77 aa12.38□□□□□ -0.43
PCDH8-202ENST00000377942 PLAC8Q9NZF1 115 aa12.36□□□□□ -0.43
PCDH8-202ENST00000377942 CHD6Q8TD26 2715 aa12.36□□□□□ -0.43
PCDH8-202ENST00000377942 COA5Q86WW8 74 aa12.35□□□□□ -0.43
PCDH8-202ENST00000377942 SETXQ7Z333 2677 aaKnown RBP12.35□□□□□ -0.43
PCDH8-202ENST00000377942 FAM229BQ4G0N7 80 aa12.33□□□□□ -0.44
PCDH8-202ENST00000377942 COX6B2Q6YFQ2 88 aa12.33□□□□□ -0.44
PCDH8-202ENST00000377942 WDFY4Q6ZS81 3184 aa12.3□□□□□ -0.44
PCDH8-202ENST00000377942 SPRR1AP35321 89 aa12.3□□□□□ -0.44
PCDH8-202ENST00000377942 BAHCC1Q9P281 2608 aa12.29□□□□□ -0.44
PCDH8-202ENST00000377942 CFAP54Q96N23 3096 aa12.27□□□□□ -0.45
PCDH8-202ENST00000377942 PRUNE2Q8WUY3 3088 aa12.25□□□□□ -0.45
PCDH8-202ENST00000377942 A0A0C4DFX4 3053 aa12.23□□□□□ -0.45
PCDH8-202ENST00000377942 BRCA2P51587 3418 aa12.23□□□□□ -0.45
PCDH8-202ENST00000377942 CYP4F30PQ9H0H9 118 aa12.22□□□□□ -0.45
PCDH8-202ENST00000377942 RBM12B-AS1Q9P1G2 102 aa12.21□□□□□ -0.45
PCDH8-202ENST00000377942 KRTAP26-1Q6PEX3 210 aa12.2□□□□□ -0.46
PCDH8-202ENST00000377942 NOTCH1P46531 2555 aa12.2□□□□□ -0.46
PCDH8-202ENST00000377942 KRTAP1-5Q9BYS1 174 aa12.2□□□□□ -0.46
PCDH8-202ENST00000377942 IGLV8-61A0A075B6I0 122 aa12.19□□□□□ -0.46
PCDH8-202ENST00000377942 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
PCDH8-202ENST00000377942 H7BZZ5 65 aa12.18□□□□□ -0.46
PCDH8-202ENST00000377942 SPANXA2-OT1Q8N9U9 137 aa12.18□□□□□ -0.46
PCDH8-202ENST00000377942 Q8NDZ9 215 aa12.17□□□□□ -0.46
PCDH8-202ENST00000377942 SPRR1BP22528 89 aa12.17□□□□□ -0.46
PCDH8-202ENST00000377942 UQCR11O14957 56 aa12.17□□□□□ -0.46
PCDH8-202ENST00000377942 LAMA2P24043 3122 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms