RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 EIF4EBP3O60516 100 aaPredicted RBP12.5□□□□□ -0.41
TBC1D4-201ENST00000377625 PRR15Q8IV56 129 aa12.5□□□□□ -0.41
TBC1D4-201ENST00000377625 SSBP3-AS1Q7Z2R9 100 aa12.49□□□□□ -0.41
TBC1D4-201ENST00000377625 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
TBC1D4-201ENST00000377625 OBSCN-AS1Q96MR7 158 aa12.49□□□□□ -0.41
TBC1D4-201ENST00000377625 A8MUN3 132 aa12.48□□□□□ -0.41
TBC1D4-201ENST00000377625 C9orf92A6NGG3 77 aa12.48□□□□□ -0.41
TBC1D4-201ENST00000377625 A0A087WTM6 91 aa12.47□□□□□ -0.41
TBC1D4-201ENST00000377625 A0A1B0GVX0 72 aa12.47□□□□□ -0.41
TBC1D4-201ENST00000377625 UQCR11O14957 56 aa12.46□□□□□ -0.41
TBC1D4-201ENST00000377625 Q8N377 158 aa12.46□□□□□ -0.41
TBC1D4-201ENST00000377625 GIG44P09565 113 aaPredicted RBP12.45□□□□□ -0.42
TBC1D4-201ENST00000377625 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
TBC1D4-201ENST00000377625 A0A0G2JQZ4 141 aa12.44□□□□□ -0.42
TBC1D4-201ENST00000377625 A0A1W2PNN7 141 aa12.44□□□□□ -0.42
TBC1D4-201ENST00000377625 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
TBC1D4-201ENST00000377625 APLNQ9ULZ1 77 aa12.44□□□□□ -0.42
TBC1D4-201ENST00000377625 SMR3BP02814 79 aaPredicted RBP12.43□□□□□ -0.42
TBC1D4-201ENST00000377625 CYP4F30PQ9H0H9 118 aa12.42□□□□□ -0.42
TBC1D4-201ENST00000377625 C9orf163Q8N9P6 203 aa12.42□□□□□ -0.42
TBC1D4-201ENST00000377625 A0A096LNT2 108 aa12.41□□□□□ -0.42
TBC1D4-201ENST00000377625 ANAPC11Q9NYG5 84 aa12.4□□□□□ -0.42
TBC1D4-201ENST00000377625 TLX1NBP0CAT3 122 aa12.4□□□□□ -0.42
TBC1D4-201ENST00000377625 LINC00612Q8N6U2 182 aa12.39□□□□□ -0.43
TBC1D4-201ENST00000377625 PLA2G2DQ9UNK4 145 aa12.39□□□□□ -0.43
TBC1D4-201ENST00000377625 IGLV7-43P04211 117 aa12.35□□□□□ -0.43
TBC1D4-201ENST00000377625 MIR22HGQ0VDD5 57 aa12.35□□□□□ -0.43
TBC1D4-201ENST00000377625 CRIPTQ9P021 101 aa12.34□□□□□ -0.43
TBC1D4-201ENST00000377625 KLKP1Q107X0 134 aa12.32□□□□□ -0.44
TBC1D4-201ENST00000377625 PSORS1C2Q9UIG4 136 aa12.32□□□□□ -0.44
TBC1D4-201ENST00000377625 IGLV5-37A0A075B6J1 123 aa12.31□□□□□ -0.44
TBC1D4-201ENST00000377625 CASC10Q5T4H9 136 aa12.3□□□□□ -0.44
TBC1D4-201ENST00000377625 SPRR4Q96PI1 79 aa12.28□□□□□ -0.44
TBC1D4-201ENST00000377625 EPG5Q9HCE0 2579 aa12.26□□□□□ -0.45
TBC1D4-201ENST00000377625 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
TBC1D4-201ENST00000377625 RBM12B-AS1Q9P1G2 102 aa12.25□□□□□ -0.45
TBC1D4-201ENST00000377625 CNBPP62633 177 aaKnown RBP12.25□□□□□ -0.45
TBC1D4-201ENST00000377625 ZNF575Q86XF7 245 aa12.24□□□□□ -0.45
TBC1D4-201ENST00000377625 A0A1W2PNM2 257 aa12.22□□□□□ -0.45
TBC1D4-201ENST00000377625 H7BZZ5 65 aa12.2□□□□□ -0.46
TBC1D4-201ENST00000377625 LINC01554Q52M75 96 aa12.19□□□□□ -0.46
TBC1D4-201ENST00000377625 USP24Q9UPU5 2620 aa12.19□□□□□ -0.46
TBC1D4-201ENST00000377625 Q8N1X5 172 aa12.17□□□□□ -0.46
TBC1D4-201ENST00000377625 MGAM2Q2M2H8 2515 aa12.16□□□□□ -0.46
TBC1D4-201ENST00000377625 IGLV5-48A0A075B6I7 105 aa12.16□□□□□ -0.46
TBC1D4-201ENST00000377625 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
TBC1D4-201ENST00000377625 FLNBO75369 2602 aaKnown RBP12.14□□□□□ -0.47
TBC1D4-201ENST00000377625 KRTAP1-3Q8IUG1 177 aa12.14□□□□□ -0.47
TBC1D4-201ENST00000377625 A0A0D9SG42 100 aa12.14□□□□□ -0.47
TBC1D4-201ENST00000377625 HECTD1Q9ULT8 2610 aa12.1□□□□□ -0.47
TBC1D4-201ENST00000377625 SPANXA2-OT1Q8N9U9 137 aa12.09□□□□□ -0.47
TBC1D4-201ENST00000377625 KRTAP1-1Q07627 177 aa12.08□□□□□ -0.48
TBC1D4-201ENST00000377625 CDC42SE1Q9NRR8 79 aa12.07□□□□□ -0.48
TBC1D4-201ENST00000377625 TNP2Q05952 138 aa12.03□□□□□ -0.48
TBC1D4-201ENST00000377625 Q6ZSA8 131 aa11.99□□□□□ -0.49
TBC1D4-201ENST00000377625 KTN1-AS1Q86SY8 53 aa11.98□□□□□ -0.49
TBC1D4-201ENST00000377625 CD164Q04900 197 aa11.97□□□□□ -0.49
TBC1D4-201ENST00000377625 LCA10Q71F78 164 aa11.94□□□□□ -0.5
TBC1D4-201ENST00000377625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
TBC1D4-201ENST00000377625 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
TBC1D4-201ENST00000377625 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
TBC1D4-201ENST00000377625 OCR1Q9BZK8 76 aa11.91□□□□□ -0.5
TBC1D4-201ENST00000377625 PRRC2CQ9Y520 2896 aaKnown RBP11.89□□□□□ -0.51
TBC1D4-201ENST00000377625 BPTFQ12830 3046 aa11.87□□□□□ -0.51
TBC1D4-201ENST00000377625 CR1P17927 2039 aa11.86□□□□□ -0.51
TBC1D4-201ENST00000377625 ATRQ13535 2644 aa11.85□□□□□ -0.51
TBC1D4-201ENST00000377625 HRES1P13985 223 aa11.83□□□□□ -0.52
TBC1D4-201ENST00000377625 CAMK2N1Q7Z7J9 78 aa11.83□□□□□ -0.52
TBC1D4-201ENST00000377625 GOLGB1Q14789 3259 aaKnown RBP11.81□□□□□ -0.52
TBC1D4-201ENST00000377625 FAM229BQ4G0N7 80 aa11.8□□□□□ -0.52
TBC1D4-201ENST00000377625 A0A1B0GU33 70 aa11.8□□□□□ -0.52
TBC1D4-201ENST00000377625 M0R2T5 61 aa11.79□□□□□ -0.52
TBC1D4-201ENST00000377625 MAST4O15021 2626 aa11.79□□□□□ -0.52
TBC1D4-201ENST00000377625 Q1T7F1 81 aa11.79□□□□□ -0.52
TBC1D4-201ENST00000377625 LUZP6Q538Z0 58 aa11.79□□□□□ -0.52
TBC1D4-201ENST00000377625 FLNAP21333 2647 aaKnown RBP11.77□□□□□ -0.53
TBC1D4-201ENST00000377625 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
TBC1D4-201ENST00000377625 WIPF1O43516 503 aa11.72□□□□□ -0.53
TBC1D4-201ENST00000377625 ZCCHC13Q8WW36 166 aaKnown RBP11.72□□□□□ -0.53
TBC1D4-201ENST00000377625 MMP24-AS1A0A0U1RRL7 71 aa11.71□□□□□ -0.53
TBC1D4-201ENST00000377625 ITPR3Q14573 2671 aa11.7□□□□□ -0.54
TBC1D4-201ENST00000377625 Q8N9P0 234 aaPredicted RBP11.68□□□□□ -0.54
TBC1D4-201ENST00000377625 CSAG1Q6PB30 78 aa11.66□□□□□ -0.54
TBC1D4-201ENST00000377625 SPRR1AP35321 89 aa11.65□□□□□ -0.54
TBC1D4-201ENST00000377625 LINC00483Q53H64 154 aa11.65□□□□□ -0.54
TBC1D4-201ENST00000377625 Q8NDZ9 215 aa11.65□□□□□ -0.54
TBC1D4-201ENST00000377625 Q75L30 129 aa11.64□□□□□ -0.55
TBC1D4-201ENST00000377625 S4R3F8 94 aa11.64□□□□□ -0.55
TBC1D4-201ENST00000377625 HELZ2Q9BYK8 2649 aaKnown RBP11.62□□□□□ -0.55
TBC1D4-201ENST00000377625 LINC01558Q9Y6Z2 57 aa11.58□□□□□ -0.56
TBC1D4-201ENST00000377625 DMAC1Q96GE9 116 aa11.57□□□□□ -0.56
TBC1D4-201ENST00000377625 Q5W150 140 aa11.57□□□□□ -0.56
TBC1D4-201ENST00000377625 SPRR1BP22528 89 aa11.55□□□□□ -0.56
TBC1D4-201ENST00000377625 LINC00472Q9H8W2 130 aa11.54□□□□□ -0.56
TBC1D4-201ENST00000377625 SPINK7P58062 85 aa11.53□□□□□ -0.56
TBC1D4-201ENST00000377625 DNAH12Q6ZR08 3092 aa11.51□□□□□ -0.57
TBC1D4-201ENST00000377625 STAB1Q9NY15 2570 aa11.49□□□□□ -0.57
TBC1D4-201ENST00000377625 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
TBC1D4-201ENST00000377625 R4GN34 69 aa11.47□□□□□ -0.57
TBC1D4-201ENST00000377625 CFAP46Q8IYW2 2715 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms