RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 Q6ZRP5 223 aa7.81□□□□□ -1.16
DDR1-227ENST00000376570 LINC00588Q9Y4M8 146 aa7.81□□□□□ -1.16
DDR1-227ENST00000376570 F8WEM9 126 aa7.8□□□□□ -1.16
DDR1-227ENST00000376570 TMEM258P61165 79 aa7.8□□□□□ -1.16
DDR1-227ENST00000376570 NREPQ16612 68 aa7.8□□□□□ -1.16
DDR1-227ENST00000376570 TGP01266 2768 aa7.8□□□□□ -1.16
DDR1-227ENST00000376570 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
DDR1-227ENST00000376570 K7EIL1 84 aa7.78□□□□□ -1.16
DDR1-227ENST00000376570 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
DDR1-227ENST00000376570 ST20-AS1Q8NBB2 130 aa7.78□□□□□ -1.16
DDR1-227ENST00000376570 NDUFC2-KCTD14E9PQ53 114 aa7.77□□□□□ -1.17
DDR1-227ENST00000376570 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
DDR1-227ENST00000376570 MDFIQ99750 246 aa7.77□□□□□ -1.17
DDR1-227ENST00000376570 CRYGAP11844 174 aa7.77□□□□□ -1.17
DDR1-227ENST00000376570 M0R378 163 aa7.76□□□□□ -1.17
DDR1-227ENST00000376570 Q6ZVQ6 151 aa7.76□□□□□ -1.17
DDR1-227ENST00000376570 UBE2AP49459 152 aa7.76□□□□□ -1.17
DDR1-227ENST00000376570 C7orf33Q8WU49 177 aa7.76□□□□□ -1.17
DDR1-227ENST00000376570 CSMD3Q7Z407 3707 aa7.75□□□□□ -1.17
DDR1-227ENST00000376570 LINC01547P58512 204 aaPredicted RBP7.75□□□□□ -1.17
DDR1-227ENST00000376570 COX17Q14061 63 aa7.75□□□□□ -1.17
DDR1-227ENST00000376570 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
DDR1-227ENST00000376570 DNAH10OSP0CZ25 163 aa7.75□□□□□ -1.17
DDR1-227ENST00000376570 EGFEM1PQ0D2K5 195 aa7.75□□□□□ -1.17
DDR1-227ENST00000376570 LINC00612Q8N6U2 182 aa7.75□□□□□ -1.17
DDR1-227ENST00000376570 BPY2O14599 106 aa7.73□□□□□ -1.17
DDR1-227ENST00000376570 LY6G6CO95867 125 aa7.73□□□□□ -1.17
DDR1-227ENST00000376570 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
DDR1-227ENST00000376570 C2orf48Q96LS8 159 aa7.73□□□□□ -1.17
DDR1-227ENST00000376570 LINC01600Q96MT4 127 aa7.72□□□□□ -1.17
DDR1-227ENST00000376570 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
DDR1-227ENST00000376570 FAM30AQ9NZY2 134 aa7.71□□□□□ -1.18
DDR1-227ENST00000376570 TM2D3Q9BRN9 247 aa7.71□□□□□ -1.18
DDR1-227ENST00000376570 IGLV9-49A0A0B4J1Y8 123 aa7.7□□□□□ -1.18
DDR1-227ENST00000376570 NDUFC2O95298 119 aa7.7□□□□□ -1.18
DDR1-227ENST00000376570 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
DDR1-227ENST00000376570 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
DDR1-227ENST00000376570 MUC7Q8TAX7 377 aa7.7□□□□□ -1.18
DDR1-227ENST00000376570 LINC01556Q5JQF7 62 aa7.69□□□□□ -1.18
DDR1-227ENST00000376570 ANK3Q12955 4377 aaKnown RBP7.69□□□□□ -1.18
DDR1-227ENST00000376570 VPREB1P12018 145 aa7.68□□□□□ -1.18
DDR1-227ENST00000376570 PRR34Q9NV39 138 aa7.68□□□□□ -1.18
DDR1-227ENST00000376570 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
DDR1-227ENST00000376570 TRAV7A0A075B6U4 112 aa7.67□□□□□ -1.18
DDR1-227ENST00000376570 FAM19A3Q7Z5A8 133 aa7.67□□□□□ -1.18
DDR1-227ENST00000376570 Q6ZQT0 140 aa7.66□□□□□ -1.18
DDR1-227ENST00000376570 LINC00474Q9P2X8 69 aa7.66□□□□□ -1.18
DDR1-227ENST00000376570 SPINK6Q6UWN8 80 aa7.66□□□□□ -1.18
DDR1-227ENST00000376570 MRPL55Q7Z7F7 128 aaKnown RBP7.65□□□□□ -1.18
DDR1-227ENST00000376570 H0Y9J4 135 aa7.65□□□□□ -1.19
DDR1-227ENST00000376570 NDUFS5O43920 106 aa7.65□□□□□ -1.19
DDR1-227ENST00000376570 C1orf137Q5JT78 98 aa7.64□□□□□ -1.19
DDR1-227ENST00000376570 SRRM2Q9UQ35 2752 aaKnown RBP7.64□□□□□ -1.19
DDR1-227ENST00000376570 ERC2-IT1O76042 136 aa7.63□□□□□ -1.19
DDR1-227ENST00000376570 OXTP01178 125 aa7.62□□□□□ -1.19
DDR1-227ENST00000376570 A0A087WSZ3 146 aa7.62□□□□□ -1.19
DDR1-227ENST00000376570 IGLV6-57P01721 117 aa7.62□□□□□ -1.19
DDR1-227ENST00000376570 PDE6GP18545 87 aa7.62□□□□□ -1.19
DDR1-227ENST00000376570 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
DDR1-227ENST00000376570 ANAPC11Q9NYG5 84 aa7.62□□□□□ -1.19
DDR1-227ENST00000376570 TRBV7-6A0A0J9YX20 115 aa7.6□□□□□ -1.19
DDR1-227ENST00000376570 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
DDR1-227ENST00000376570 SERP1Q9Y6X1 66 aa7.59□□□□□ -1.19
DDR1-227ENST00000376570 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
DDR1-227ENST00000376570 ELOF1P60002 83 aaKnown RBP7.59□□□□□ -1.19
DDR1-227ENST00000376570 KRTAP1-5Q9BYS1 174 aa7.59□□□□□ -1.19
DDR1-227ENST00000376570 LINC00336Q6ZUF6 198 aa7.58□□□□□ -1.2
DDR1-227ENST00000376570 PSPHP1O15172 72 aa7.58□□□□□ -1.2
DDR1-227ENST00000376570 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
DDR1-227ENST00000376570 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
DDR1-227ENST00000376570 H7BZZ5 65 aa7.57□□□□□ -1.2
DDR1-227ENST00000376570 COL7A1Q02388 2944 aa7.56□□□□□ -1.2
DDR1-227ENST00000376570 SMIM29Q86T20 159 aa7.56□□□□□ -1.2
DDR1-227ENST00000376570 OBSCN-AS1Q96MR7 158 aa7.55□□□□□ -1.2
DDR1-227ENST00000376570 GVQW2A0A096LPI5 108 aaPredicted RBP7.55□□□□□ -1.2
DDR1-227ENST00000376570 Q9BRP9 147 aa7.55□□□□□ -1.2
DDR1-227ENST00000376570 PRYO14603 147 aa7.54□□□□□ -1.2
DDR1-227ENST00000376570 CDK2AP2O75956 126 aa7.54□□□□□ -1.2
DDR1-227ENST00000376570 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
DDR1-227ENST00000376570 Q8N377 158 aa7.53□□□□□ -1.2
DDR1-227ENST00000376570 DHRS4-AS1Q9P1J3 65 aa7.53□□□□□ -1.2
DDR1-227ENST00000376570 RETNLBQ9BQ08 111 aa7.53□□□□□ -1.2
DDR1-227ENST00000376570 Q6ZRX8 168 aa7.52□□□□□ -1.21
DDR1-227ENST00000376570 B9D2Q9BPU9 175 aa7.52□□□□□ -1.21
DDR1-227ENST00000376570 H3BNG1 76 aa7.51□□□□□ -1.21
DDR1-227ENST00000376570 SPTSSBQ8NFR3 76 aa7.51□□□□□ -1.21
DDR1-227ENST00000376570 CXCL6P80162 114 aa7.5□□□□□ -1.21
DDR1-227ENST00000376570 LOC110117498A0A087WWA1 95 aa7.5□□□□□ -1.21
DDR1-227ENST00000376570 EPM2AB3EWF7 344 aa7.5□□□□□ -1.21
DDR1-227ENST00000376570 LINC00476Q8WZB0 136 aa7.5□□□□□ -1.21
DDR1-227ENST00000376570 CIRBP-AS1Q8TBR5 109 aa7.48□□□□□ -1.21
DDR1-227ENST00000376570 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
DDR1-227ENST00000376570 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
DDR1-227ENST00000376570 IGLV1-50A0A075B6I6 118 aa7.48□□□□□ -1.21
DDR1-227ENST00000376570 NDUFC1O43677 76 aa7.48□□□□□ -1.21
DDR1-227ENST00000376570 Q5XG85 94 aa7.48□□□□□ -1.21
DDR1-227ENST00000376570 KRTAP26-1Q6PEX3 210 aa7.48□□□□□ -1.21
DDR1-227ENST00000376570 MP68P56378 58 aa7.47□□□□□ -1.21
DDR1-227ENST00000376570 IGLV5-52A0A0A0MRZ9 124 aa7.47□□□□□ -1.21
DDR1-227ENST00000376570 H3BQ85 93 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms