RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 RETNLBQ9BQ08 111 aa8.59□□□□□ -1.03
NPLOC4-202ENST00000374747 GCN1Q92616 2671 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-202ENST00000374747 HELZ2Q9BYK8 2649 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-202ENST00000374747 Q6ZRU5 148 aa8.58□□□□□ -1.04
NPLOC4-202ENST00000374747 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
NPLOC4-202ENST00000374747 SMIM29Q86T20 159 aa8.58□□□□□ -1.04
NPLOC4-202ENST00000374747 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
NPLOC4-202ENST00000374747 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 RPS28P62857 69 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 SPATA3Q8NHX4 192 aa8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 X6R8D5 127 aa8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 MUC4Q99102 2169 aa8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 SBSPONQ8IVN8 264 aa8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 NUPR2A6NF83 97 aa8.57□□□□□ -1.04
NPLOC4-202ENST00000374747 SETXQ7Z333 2677 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-202ENST00000374747 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
NPLOC4-202ENST00000374747 APCP25054 2843 aa8.54□□□□□ -1.04
NPLOC4-202ENST00000374747 PRLHP81277 87 aa8.54□□□□□ -1.04
NPLOC4-202ENST00000374747 IGLV5-52A0A0A0MRZ9 124 aa8.54□□□□□ -1.04
NPLOC4-202ENST00000374747 C11orf72Q8NBR9 251 aa8.54□□□□□ -1.04
NPLOC4-202ENST00000374747 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
NPLOC4-202ENST00000374747 LINC00315P59091 139 aa8.53□□□□□ -1.04
NPLOC4-202ENST00000374747 Q9UF83 564 aa8.53□□□□□ -1.04
NPLOC4-202ENST00000374747 A0A096LNT2 108 aa8.52□□□□□ -1.04
NPLOC4-202ENST00000374747 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
NPLOC4-202ENST00000374747 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
NPLOC4-202ENST00000374747 C4orf26Q17RF5 130 aa8.52□□□□□ -1.05
NPLOC4-202ENST00000374747 IGLV5-45A0A087WSX0 123 aa8.51□□□□□ -1.05
NPLOC4-202ENST00000374747 FAM218AQ96MZ4 157 aa8.51□□□□□ -1.05
NPLOC4-202ENST00000374747 A0A1B0GW54 56 aa8.5□□□□□ -1.05
NPLOC4-202ENST00000374747 TP53AIP1Q9HCN2 124 aa8.5□□□□□ -1.05
NPLOC4-202ENST00000374747 A0A1B0GU69 56 aa8.49□□□□□ -1.05
NPLOC4-202ENST00000374747 HECTD1Q9ULT8 2610 aa8.49□□□□□ -1.05
NPLOC4-202ENST00000374747 Q6ZQT0 140 aa8.47□□□□□ -1.05
NPLOC4-202ENST00000374747 KRTAP24-1Q3LI83 254 aa8.47□□□□□ -1.05
NPLOC4-202ENST00000374747 UBR5O95071 2799 aaPredicted RBP8.46□□□□□ -1.05
NPLOC4-202ENST00000374747 IGKV2D-30A0A075B6S6 120 aa8.46□□□□□ -1.05
NPLOC4-202ENST00000374747 IGKV2-30P06310 120 aa8.46□□□□□ -1.05
NPLOC4-202ENST00000374747 LOC110117498A0A087WWA1 95 aa8.46□□□□□ -1.06
NPLOC4-202ENST00000374747 ACYP2P14621 99 aa8.46□□□□□ -1.06
NPLOC4-202ENST00000374747 H3BPC8 53 aa8.45□□□□□ -1.06
NPLOC4-202ENST00000374747 ELOF1P60002 83 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-202ENST00000374747 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
NPLOC4-202ENST00000374747 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
NPLOC4-202ENST00000374747 VWFP04275 2813 aa8.44□□□□□ -1.06
NPLOC4-202ENST00000374747 C7orf65Q6ZTY9 151 aa8.44□□□□□ -1.06
NPLOC4-202ENST00000374747 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-202ENST00000374747 LINC00167Q96N53 147 aa8.44□□□□□ -1.06
NPLOC4-202ENST00000374747 NHLRC4P0CG21 123 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-202ENST00000374747 F8P00451 2351 aa8.43□□□□□ -1.06
NPLOC4-202ENST00000374747 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
NPLOC4-202ENST00000374747 Q8NBF4 154 aa8.42□□□□□ -1.06
NPLOC4-202ENST00000374747 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
NPLOC4-202ENST00000374747 TM2D3Q9BRN9 247 aa8.41□□□□□ -1.06
NPLOC4-202ENST00000374747 FLNBO75369 2602 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-202ENST00000374747 ATRQ13535 2644 aa8.4□□□□□ -1.06
NPLOC4-202ENST00000374747 TRAV22A0A0B4J277 110 aa8.39□□□□□ -1.07
NPLOC4-202ENST00000374747 Q6ZRX8 168 aa8.38□□□□□ -1.07
NPLOC4-202ENST00000374747 LINC00476Q8WZB0 136 aa8.38□□□□□ -1.07
NPLOC4-202ENST00000374747 MOBPQ13875 183 aa8.38□□□□□ -1.07
NPLOC4-202ENST00000374747 KRTAP1-3Q8IUG1 177 aa8.37□□□□□ -1.07
NPLOC4-202ENST00000374747 H3BNG1 76 aa8.37□□□□□ -1.07
NPLOC4-202ENST00000374747 UNC79Q9P2D8 2635 aa8.37□□□□□ -1.07
NPLOC4-202ENST00000374747 ATP11AUNQ6ZP68 121 aa8.36□□□□□ -1.07
NPLOC4-202ENST00000374747 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-202ENST00000374747 C8orf87E5RJ46 101 aa8.35□□□□□ -1.07
NPLOC4-202ENST00000374747 LITAFQ99732 161 aa8.35□□□□□ -1.07
NPLOC4-202ENST00000374747 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
NPLOC4-202ENST00000374747 Q8NAQ8 132 aa8.33□□□□□ -1.08
NPLOC4-202ENST00000374747 ERC2-IT1O76042 136 aa8.32□□□□□ -1.08
NPLOC4-202ENST00000374747 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
NPLOC4-202ENST00000374747 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
NPLOC4-202ENST00000374747 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
NPLOC4-202ENST00000374747 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
NPLOC4-202ENST00000374747 TRBV7-4A0A0J9YYF1 115 aa8.3□□□□□ -1.08
NPLOC4-202ENST00000374747 PDZD2O15018 2839 aa8.29□□□□□ -1.08
NPLOC4-202ENST00000374747 KRTAP1-1Q07627 177 aa8.29□□□□□ -1.08
NPLOC4-202ENST00000374747 RPL37AP61513 92 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-202ENST00000374747 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
NPLOC4-202ENST00000374747 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-202ENST00000374747 LINC00313P59037 77 aa8.28□□□□□ -1.08
NPLOC4-202ENST00000374747 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-202ENST00000374747 CSNK1G2-AS1Q8NCQ2 148 aa8.28□□□□□ -1.08
NPLOC4-202ENST00000374747 OTOGQ6ZRI0 2925 aa8.27□□□□□ -1.08
NPLOC4-202ENST00000374747 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
NPLOC4-202ENST00000374747 CYP4F30PQ9H0H9 118 aa8.27□□□□□ -1.09
NPLOC4-202ENST00000374747 IGLV6-57P01721 117 aa8.27□□□□□ -1.09
NPLOC4-202ENST00000374747 MDFIQ99750 246 aa8.27□□□□□ -1.09
NPLOC4-202ENST00000374747 A8MUN3 132 aa8.26□□□□□ -1.09
NPLOC4-202ENST00000374747 IGLV8-61A0A075B6I0 122 aa8.25□□□□□ -1.09
NPLOC4-202ENST00000374747 A8MWP4 228 aa8.25□□□□□ -1.09
NPLOC4-202ENST00000374747 C16orf90A8MZG2 172 aa8.25□□□□□ -1.09
NPLOC4-202ENST00000374747 KRTAP10-3P60369 221 aa8.25□□□□□ -1.09
NPLOC4-202ENST00000374747 K7EQZ3 153 aa8.25□□□□□ -1.09
NPLOC4-202ENST00000374747 VPREB1P12018 145 aa8.24□□□□□ -1.09
NPLOC4-202ENST00000374747 COA5Q86WW8 74 aa8.24□□□□□ -1.09
NPLOC4-202ENST00000374747 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
NPLOC4-202ENST00000374747 NOTCH1P46531 2555 aa8.23□□□□□ -1.09
NPLOC4-202ENST00000374747 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms