RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 A4D1N5 150 aa9.1□□□□□ -0.95
HSPG2-201ENST00000374673 PRLHP81277 87 aa9.1□□□□□ -0.95
HSPG2-201ENST00000374673 TAL2Q16559 108 aa9.1□□□□□ -0.95
HSPG2-201ENST00000374673 UQCR10Q9UDW1 63 aa9.1□□□□□ -0.95
HSPG2-201ENST00000374673 PCLOQ9Y6V0 5065 aa9.1□□□□□ -0.95
HSPG2-201ENST00000374673 TRAV13-2A0A0B4J235 113 aa9.08□□□□□ -0.96
HSPG2-201ENST00000374673 ETDCA0A1B0GVM5 59 aa9.08□□□□□ -0.96
HSPG2-201ENST00000374673 FLG2Q5D862 2391 aaPredicted RBP9.08□□□□□ -0.96
HSPG2-201ENST00000374673 KRTAP29-1A8MX34 341 aaPredicted RBP9.07□□□□□ -0.96
HSPG2-201ENST00000374673 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
HSPG2-201ENST00000374673 OXTP01178 125 aa9.07□□□□□ -0.96
HSPG2-201ENST00000374673 A6NDN8 102 aa9.06□□□□□ -0.96
HSPG2-201ENST00000374673 B5MCH6 92 aa9.06□□□□□ -0.96
HSPG2-201ENST00000374673 CEND1Q8N111 149 aa9.06□□□□□ -0.96
HSPG2-201ENST00000374673 HSD52Q0P140 79 aa9.04□□□□□ -0.96
HSPG2-201ENST00000374673 Q6ZRX8 168 aa9.04□□□□□ -0.96
HSPG2-201ENST00000374673 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
HSPG2-201ENST00000374673 HINT1P49773 126 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-201ENST00000374673 LINC01600Q96MT4 127 aa9.03□□□□□ -0.96
HSPG2-201ENST00000374673 C12orf57Q99622 126 aa9.03□□□□□ -0.96
HSPG2-201ENST00000374673 HIGD2AQ9BW72 106 aa9.03□□□□□ -0.96
HSPG2-201ENST00000374673 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
HSPG2-201ENST00000374673 C6orf99Q4VX62 202 aa9.02□□□□□ -0.97
HSPG2-201ENST00000374673 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.97
HSPG2-201ENST00000374673 FAT3Q8TDW7 4589 aa9.02□□□□□ -0.97
HSPG2-201ENST00000374673 MYCBP2O75592 4640 aa9.01□□□□□ -0.97
HSPG2-201ENST00000374673 A0A0B4J2C4 111 aa9.01□□□□□ -0.97
HSPG2-201ENST00000374673 TMEM238LA0A1B0GVL6 79 aa9.01□□□□□ -0.97
HSPG2-201ENST00000374673 A6NJY4 79 aa9.01□□□□□ -0.97
HSPG2-201ENST00000374673 CFC1BP0CG36 223 aa9.01□□□□□ -0.97
HSPG2-201ENST00000374673 CFC1P0CG37 223 aa9.01□□□□□ -0.97
HSPG2-201ENST00000374673 TRBV7-6A0A0J9YX20 115 aa9□□□□□ -0.97
HSPG2-201ENST00000374673 FXYD2P54710 66 aa9□□□□□ -0.97
HSPG2-201ENST00000374673 SMIM11BQ8TCY0 68 aa9□□□□□ -0.97
HSPG2-201ENST00000374673 Q9BRP9 147 aa9□□□□□ -0.97
HSPG2-201ENST00000374673 LRP1Q07954 4544 aaKnown RBP9□□□□□ -0.97
HSPG2-201ENST00000374673 RPL13AP40429 203 aaKnown RBP8.99□□□□□ -0.97
HSPG2-201ENST00000374673 ELOF1P60002 83 aaKnown RBP8.99□□□□□ -0.97
HSPG2-201ENST00000374673 COX7BP24311 80 aa8.98□□□□□ -0.97
HSPG2-201ENST00000374673 RAB37Q96AX2 223 aa8.98□□□□□ -0.97
HSPG2-201ENST00000374673 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
HSPG2-201ENST00000374673 MT1HL1P0DM35 61 aa8.97□□□□□ -0.97
HSPG2-201ENST00000374673 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-201ENST00000374673 TSTD3H0UI37 97 aa8.96□□□□□ -0.98
HSPG2-201ENST00000374673 J3QL48 77 aa8.96□□□□□ -0.98
HSPG2-201ENST00000374673 ERC2-IT1O76042 136 aa8.96□□□□□ -0.98
HSPG2-201ENST00000374673 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
HSPG2-201ENST00000374673 DHRS4-AS1Q9P1J3 65 aa8.95□□□□□ -0.98
HSPG2-201ENST00000374673 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
HSPG2-201ENST00000374673 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
HSPG2-201ENST00000374673 PRR26Q8N8Z3 221 aa8.93□□□□□ -0.98
HSPG2-201ENST00000374673 NHP2Q9NX24 153 aaKnown RBP8.93□□□□□ -0.98
HSPG2-201ENST00000374673 PRO1854Q9UHT4 67 aa8.93□□□□□ -0.98
HSPG2-201ENST00000374673 VAMP3Q15836 100 aa8.92□□□□□ -0.98
HSPG2-201ENST00000374673 BVES-AS1Q5T3Y7 98 aa8.92□□□□□ -0.98
HSPG2-201ENST00000374673 A0A087X002 238 aa8.91□□□□□ -0.98
HSPG2-201ENST00000374673 H7C2G1 150 aa8.91□□□□□ -0.98
HSPG2-201ENST00000374673 CRYGAP11844 174 aa8.91□□□□□ -0.98
HSPG2-201ENST00000374673 CTAG1AP78358 180 aa8.91□□□□□ -0.98
HSPG2-201ENST00000374673 ANAPC11Q9NYG5 84 aa8.91□□□□□ -0.98
HSPG2-201ENST00000374673 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
HSPG2-201ENST00000374673 M0R143 59 aa8.89□□□□□ -0.99
HSPG2-201ENST00000374673 Q1RN00 199 aa8.89□□□□□ -0.99
HSPG2-201ENST00000374673 K7ERJ3 54 aa8.88□□□□□ -0.99
HSPG2-201ENST00000374673 GAGE2AQ6NT46 116 aa8.88□□□□□ -0.99
HSPG2-201ENST00000374673 TNXBP22105 4242 aa8.88□□□□□ -0.99
HSPG2-201ENST00000374673 KRTAP13-2Q52LG2 175 aa8.87□□□□□ -0.99
HSPG2-201ENST00000374673 LINC00575Q6W349 94 aa8.87□□□□□ -0.99
HSPG2-201ENST00000374673 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
HSPG2-201ENST00000374673 SLC25A20O43772 301 aa8.86□□□□□ -0.99
HSPG2-201ENST00000374673 SPRR1BP22528 89 aa8.85□□□□□ -0.99
HSPG2-201ENST00000374673 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
HSPG2-201ENST00000374673 H0YGX0 51 aa8.84□□□□□ -0.99
HSPG2-201ENST00000374673 hADV29S1A0JD25 119 aa8.83□□□□□ -1
HSPG2-201ENST00000374673 TSPAN13O95857 204 aa8.83□□□□□ -1
HSPG2-201ENST00000374673 C3orf22Q8N5N4 141 aa8.83□□□□□ -1
HSPG2-201ENST00000374673 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
HSPG2-201ENST00000374673 IGLV5-48A0A075B6I7 105 aa8.82□□□□□ -1
HSPG2-201ENST00000374673 TRIAP1O43715 76 aa8.82□□□□□ -1
HSPG2-201ENST00000374673 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
HSPG2-201ENST00000374673 TEX49A0A1B0GTD5 131 aa8.8□□□□□ -1
HSPG2-201ENST00000374673 PSMB2P49721 201 aa8.79□□□□□ -1
HSPG2-201ENST00000374673 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.79□□□□□ -1
HSPG2-201ENST00000374673 Q6ZQY7 126 aa8.79□□□□□ -1
HSPG2-201ENST00000374673 DEFB105AQ8NG35 78 aa8.79□□□□□ -1
HSPG2-201ENST00000374673 FAM218AQ96MZ4 157 aa8.79□□□□□ -1
HSPG2-201ENST00000374673 A0A1B0GX51 115 aa8.78□□□□□ -1
HSPG2-201ENST00000374673 COX6CP09669 75 aa8.78□□□□□ -1
HSPG2-201ENST00000374673 IGLV9-49A0A0B4J1Y8 123 aa8.77□□□□□ -1.01
HSPG2-201ENST00000374673 SNCGO76070 127 aa8.77□□□□□ -1.01
HSPG2-201ENST00000374673 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
HSPG2-201ENST00000374673 MOBPQ13875 183 aa8.76□□□□□ -1.01
HSPG2-201ENST00000374673 Q8N377 158 aa8.76□□□□□ -1.01
HSPG2-201ENST00000374673 BATFQ16520 125 aa8.75□□□□□ -1.01
HSPG2-201ENST00000374673 SSBP3-AS1Q7Z2R9 100 aa8.75□□□□□ -1.01
HSPG2-201ENST00000374673 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
HSPG2-201ENST00000374673 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
HSPG2-201ENST00000374673 C9orf153Q5TBE3 101 aa8.74□□□□□ -1.01
HSPG2-201ENST00000374673 Q8NBF4 154 aa8.74□□□□□ -1.01
HSPG2-201ENST00000374673 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms