RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 X6R8D5 127 aa6.99□□□□□ -1.29
PRPF38B-201ENST00000370021 APOC4P55056 127 aa6.99□□□□□ -1.29
PRPF38B-201ENST00000370021 NBPF19A0A087WUL8 3843 aa6.99□□□□□ -1.29
PRPF38B-201ENST00000370021 COL6A5A8TX70 2615 aa6.98□□□□□ -1.29
PRPF38B-201ENST00000370021 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
PRPF38B-201ENST00000370021 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
PRPF38B-201ENST00000370021 IGLV6-57P01721 117 aa6.98□□□□□ -1.29
PRPF38B-201ENST00000370021 RETNQ9HD89 108 aa6.98□□□□□ -1.29
PRPF38B-201ENST00000370021 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
PRPF38B-201ENST00000370021 LELP1Q5T871 98 aa6.97□□□□□ -1.29
PRPF38B-201ENST00000370021 IGKV2-24A0A0C4DH68 120 aa6.97□□□□□ -1.29
PRPF38B-201ENST00000370021 SEC61GP60059 68 aa6.97□□□□□ -1.29
PRPF38B-201ENST00000370021 ZNF469Q96JG9 3925 aaPredicted RBP6.96□□□□□ -1.29
PRPF38B-201ENST00000370021 C1orf137Q5JT78 98 aa6.96□□□□□ -1.29
PRPF38B-201ENST00000370021 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.3
PRPF38B-201ENST00000370021 TENM4Q6N022 2769 aa6.95□□□□□ -1.3
PRPF38B-201ENST00000370021 VWFP04275 2813 aa6.95□□□□□ -1.3
PRPF38B-201ENST00000370021 SYCNQ0VAF6 134 aa6.95□□□□□ -1.3
PRPF38B-201ENST00000370021 KPRPQ5T749 579 aaPredicted RBP6.95□□□□□ -1.3
PRPF38B-201ENST00000370021 LINC00208Q96KT6 92 aa6.95□□□□□ -1.3
PRPF38B-201ENST00000370021 MAST4O15021 2626 aa6.95□□□□□ -1.3
PRPF38B-201ENST00000370021 MGAM2Q2M2H8 2515 aa6.95□□□□□ -1.3
PRPF38B-201ENST00000370021 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
PRPF38B-201ENST00000370021 FSHBP01225 129 aa6.94□□□□□ -1.3
PRPF38B-201ENST00000370021 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
PRPF38B-201ENST00000370021 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
PRPF38B-201ENST00000370021 IGKV4-1P06312 121 aa6.94□□□□□ -1.3
PRPF38B-201ENST00000370021 H3BQ85 93 aa6.93□□□□□ -1.3
PRPF38B-201ENST00000370021 MP68P56378 58 aa6.93□□□□□ -1.3
PRPF38B-201ENST00000370021 PMAIP1Q13794 54 aa6.92□□□□□ -1.3
PRPF38B-201ENST00000370021 CHKB-CPT1BH3BT56 60 aa6.92□□□□□ -1.3
PRPF38B-201ENST00000370021 IGHV4-30-4P0DP06 118 aa6.92□□□□□ -1.3
PRPF38B-201ENST00000370021 Q6ZRP5 223 aa6.91□□□□□ -1.3
PRPF38B-201ENST00000370021 VPREB1P12018 145 aa6.91□□□□□ -1.3
PRPF38B-201ENST00000370021 FAM168BA1KXE4 195 aa6.9□□□□□ -1.3
PRPF38B-201ENST00000370021 C9orf66Q5T8R8 295 aa6.9□□□□□ -1.3
PRPF38B-201ENST00000370021 EGFEM1PQ0D2K5 195 aa6.9□□□□□ -1.3
PRPF38B-201ENST00000370021 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.3
PRPF38B-201ENST00000370021 C7orf33Q8WU49 177 aa6.9□□□□□ -1.3
PRPF38B-201ENST00000370021 A8MUN3 132 aa6.9□□□□□ -1.31
PRPF38B-201ENST00000370021 K7EQZ3 153 aa6.9□□□□□ -1.31
PRPF38B-201ENST00000370021 BCE1O60756 84 aa6.9□□□□□ -1.31
PRPF38B-201ENST00000370021 Q6ZTC4 211 aa6.9□□□□□ -1.31
PRPF38B-201ENST00000370021 PKD1L1Q8TDX9 2849 aa6.89□□□□□ -1.31
PRPF38B-201ENST00000370021 H0Y9J4 135 aa6.89□□□□□ -1.31
PRPF38B-201ENST00000370021 RPL37AP61513 92 aaKnown RBP6.89□□□□□ -1.31
PRPF38B-201ENST00000370021 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
PRPF38B-201ENST00000370021 A0A087WSZ3 146 aa6.88□□□□□ -1.31
PRPF38B-201ENST00000370021 SERTAD4-AS1Q5TG53 156 aa6.88□□□□□ -1.31
PRPF38B-201ENST00000370021 C16orf95Q9H693 158 aa6.88□□□□□ -1.31
PRPF38B-201ENST00000370021 NDUFS5O43920 106 aa6.88□□□□□ -1.31
PRPF38B-201ENST00000370021 OXLD1Q5BKU9 147 aa6.88□□□□□ -1.31
PRPF38B-201ENST00000370021 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
PRPF38B-201ENST00000370021 Q8N377 158 aa6.87□□□□□ -1.31
PRPF38B-201ENST00000370021 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
PRPF38B-201ENST00000370021 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
PRPF38B-201ENST00000370021 PRLHP81277 87 aa6.86□□□□□ -1.31
PRPF38B-201ENST00000370021 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
PRPF38B-201ENST00000370021 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
PRPF38B-201ENST00000370021 A6NED7 52 aa6.85□□□□□ -1.31
PRPF38B-201ENST00000370021 PCOTHQ58A44 107 aa6.85□□□□□ -1.31
PRPF38B-201ENST00000370021 PSCAO43653 123 aa6.85□□□□□ -1.31
PRPF38B-201ENST00000370021 NSD1Q96L73 2696 aaPredicted RBP6.84□□□□□ -1.31
PRPF38B-201ENST00000370021 DEFB131BA0A096LNP1 70 aa6.84□□□□□ -1.31
PRPF38B-201ENST00000370021 A0A1W2PNM2 257 aa6.84□□□□□ -1.31
PRPF38B-201ENST00000370021 INAFM1C9JVW0 142 aa6.84□□□□□ -1.31
PRPF38B-201ENST00000370021 LINC00612Q8N6U2 182 aa6.84□□□□□ -1.32
PRPF38B-201ENST00000370021 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
PRPF38B-201ENST00000370021 ERC2-IT1O76042 136 aa6.83□□□□□ -1.32
PRPF38B-201ENST00000370021 TRAV22A0A0B4J277 110 aa6.82□□□□□ -1.32
PRPF38B-201ENST00000370021 KRTAP10-3P60369 221 aa6.82□□□□□ -1.32
PRPF38B-201ENST00000370021 DHRS4-AS1Q9P1J3 65 aa6.82□□□□□ -1.32
PRPF38B-201ENST00000370021 Q8NAQ8 132 aa6.82□□□□□ -1.32
PRPF38B-201ENST00000370021 UBE2AP49459 152 aa6.81□□□□□ -1.32
PRPF38B-201ENST00000370021 TENM1Q9UKZ4 2725 aa6.81□□□□□ -1.32
PRPF38B-201ENST00000370021 PRR34Q9NV39 138 aa6.8□□□□□ -1.32
PRPF38B-201ENST00000370021 C15orf56Q8N910 161 aa6.8□□□□□ -1.32
PRPF38B-201ENST00000370021 hDV103S1A0JD37 113 aa6.8□□□□□ -1.32
PRPF38B-201ENST00000370021 Q8NBF4 154 aa6.8□□□□□ -1.32
PRPF38B-201ENST00000370021 C11orf45Q8TAV5 145 aa6.79□□□□□ -1.32
PRPF38B-201ENST00000370021 A8MU10 97 aa6.79□□□□□ -1.32
PRPF38B-201ENST00000370021 H0Y9P7 68 aa6.79□□□□□ -1.32
PRPF38B-201ENST00000370021 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
PRPF38B-201ENST00000370021 Q6ZRX8 168 aa6.78□□□□□ -1.32
PRPF38B-201ENST00000370021 LINC00476Q8WZB0 136 aa6.78□□□□□ -1.32
PRPF38B-201ENST00000370021 B9D2Q9BPU9 175 aa6.78□□□□□ -1.32
PRPF38B-201ENST00000370021 GVQW2A0A096LPI5 108 aaPredicted RBP6.78□□□□□ -1.32
PRPF38B-201ENST00000370021 CASC10Q5T4H9 136 aa6.77□□□□□ -1.33
PRPF38B-201ENST00000370021 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
PRPF38B-201ENST00000370021 F8WDY8 70 aa6.76□□□□□ -1.33
PRPF38B-201ENST00000370021 Q9BRP9 147 aa6.76□□□□□ -1.33
PRPF38B-201ENST00000370021 DSCR10P59022 87 aa6.76□□□□□ -1.33
PRPF38B-201ENST00000370021 ANK3Q12955 4377 aaKnown RBP6.76□□□□□ -1.33
PRPF38B-201ENST00000370021 OTOGQ6ZRI0 2925 aa6.76□□□□□ -1.33
PRPF38B-201ENST00000370021 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
PRPF38B-201ENST00000370021 NDUFB1O75438 58 aa6.75□□□□□ -1.33
PRPF38B-201ENST00000370021 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
PRPF38B-201ENST00000370021 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
PRPF38B-201ENST00000370021 REG3GQ6UW15 175 aa6.74□□□□□ -1.33
PRPF38B-201ENST00000370021 TENM3Q9P273 2699 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms