RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 A8MUN3 132 aa10.56□□□□□ -0.72
CHD1L-203ENST00000369259 K7EQZ3 153 aa10.56□□□□□ -0.72
CHD1L-203ENST00000369259 SETD2Q9BYW2 2564 aaPredicted RBP10.56□□□□□ -0.72
CHD1L-203ENST00000369259 C1orf137Q5JT78 98 aa10.55□□□□□ -0.72
CHD1L-203ENST00000369259 Q8NBF4 154 aa10.55□□□□□ -0.72
CHD1L-203ENST00000369259 GCN1Q92616 2671 aaKnown RBP10.55□□□□□ -0.72
CHD1L-203ENST00000369259 NDUFB1O75438 58 aa10.54□□□□□ -0.72
CHD1L-203ENST00000369259 NF1P21359 2839 aa10.54□□□□□ -0.72
CHD1L-203ENST00000369259 KMT2BQ9UMN6 2715 aaPredicted RBP10.54□□□□□ -0.72
CHD1L-203ENST00000369259 SYCNQ0VAF6 134 aa10.54□□□□□ -0.72
CHD1L-203ENST00000369259 CD164Q04900 197 aa10.53□□□□□ -0.72
CHD1L-203ENST00000369259 TNP2Q05952 138 aa10.53□□□□□ -0.72
CHD1L-203ENST00000369259 HTN3P15516 51 aa10.53□□□□□ -0.72
CHD1L-203ENST00000369259 DEFB135Q30KP9 77 aa10.53□□□□□ -0.72
CHD1L-203ENST00000369259 DEFB113Q30KQ7 82 aa10.53□□□□□ -0.72
CHD1L-203ENST00000369259 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
CHD1L-203ENST00000369259 SONP18583 2426 aaKnown RBP10.52□□□□□ -0.72
CHD1L-203ENST00000369259 HCG22E2RYF7 251 aa10.52□□□□□ -0.73
CHD1L-203ENST00000369259 DHRS4-AS1Q9P1J3 65 aa10.52□□□□□ -0.73
CHD1L-203ENST00000369259 KRTAP10-9P60411 292 aa10.51□□□□□ -0.73
CHD1L-203ENST00000369259 Q5VV11 94 aa10.51□□□□□ -0.73
CHD1L-203ENST00000369259 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
CHD1L-203ENST00000369259 KRTAP26-1Q6PEX3 210 aa10.5□□□□□ -0.73
CHD1L-203ENST00000369259 C15orf56Q8N910 161 aa10.5□□□□□ -0.73
CHD1L-203ENST00000369259 PRB2P02812 416 aaPredicted RBP10.49□□□□□ -0.73
CHD1L-203ENST00000369259 C7orf33Q8WU49 177 aa10.49□□□□□ -0.73
CHD1L-203ENST00000369259 A8MU10 97 aa10.48□□□□□ -0.73
CHD1L-203ENST00000369259 UBE2BP63146 152 aa10.48□□□□□ -0.73
CHD1L-203ENST00000369259 B9D2Q9BPU9 175 aa10.48□□□□□ -0.73
CHD1L-203ENST00000369259 Q6ZRX8 168 aa10.47□□□□□ -0.73
CHD1L-203ENST00000369259 SERTAD4-AS1Q5TG53 156 aa10.46□□□□□ -0.73
CHD1L-203ENST00000369259 Q9BRP9 147 aa10.46□□□□□ -0.73
CHD1L-203ENST00000369259 CENPEQ02224 2701 aa10.46□□□□□ -0.73
CHD1L-203ENST00000369259 MP68P56378 58 aa10.46□□□□□ -0.74
CHD1L-203ENST00000369259 SPART-AS1P0CW21 52 aa10.45□□□□□ -0.74
CHD1L-203ENST00000369259 UBE2AP49459 152 aa10.45□□□□□ -0.74
CHD1L-203ENST00000369259 Q8NAQ8 132 aa10.45□□□□□ -0.74
CHD1L-203ENST00000369259 FAM208BQ5VWN6 2430 aa10.44□□□□□ -0.74
CHD1L-203ENST00000369259 KRTAP1-3Q8IUG1 177 aa10.44□□□□□ -0.74
CHD1L-203ENST00000369259 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
CHD1L-203ENST00000369259 CHKB-CPT1BH3BT56 60 aa10.43□□□□□ -0.74
CHD1L-203ENST00000369259 WFDC10BQ8IUB3 73 aa10.43□□□□□ -0.74
CHD1L-203ENST00000369259 LIMD2Q9BT23 127 aa10.43□□□□□ -0.74
CHD1L-203ENST00000369259 MYO18BQ8IUG5 2567 aa10.43□□□□□ -0.74
CHD1L-203ENST00000369259 APOC4P55056 127 aa10.42□□□□□ -0.74
CHD1L-203ENST00000369259 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
CHD1L-203ENST00000369259 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
CHD1L-203ENST00000369259 ABCA12Q86UK0 2595 aa10.4□□□□□ -0.74
CHD1L-203ENST00000369259 SPANXA2-OT1Q8N9U9 137 aa10.4□□□□□ -0.74
CHD1L-203ENST00000369259 LINC00208Q96KT6 92 aa10.4□□□□□ -0.74
CHD1L-203ENST00000369259 RPL37AP8A6NKH3 93 aa10.4□□□□□ -0.74
CHD1L-203ENST00000369259 WFDC13Q8IUB5 93 aa10.4□□□□□ -0.74
CHD1L-203ENST00000369259 ZNF469Q96JG9 3925 aaPredicted RBP10.39□□□□□ -0.75
CHD1L-203ENST00000369259 C16orf90A8MZG2 172 aa10.39□□□□□ -0.75
CHD1L-203ENST00000369259 KTN1-AS1Q86SY8 53 aa10.39□□□□□ -0.75
CHD1L-203ENST00000369259 RETNQ9HD89 108 aa10.39□□□□□ -0.75
CHD1L-203ENST00000369259 SPRR1AP35321 89 aa10.38□□□□□ -0.75
CHD1L-203ENST00000369259 DEFB116Q30KQ4 102 aa10.38□□□□□ -0.75
CHD1L-203ENST00000369259 MRPL55Q7Z7F7 128 aaKnown RBP10.38□□□□□ -0.75
CHD1L-203ENST00000369259 IGLV1-50A0A075B6I6 118 aa10.37□□□□□ -0.75
CHD1L-203ENST00000369259 PRR15LQ9BU68 103 aa10.37□□□□□ -0.75
CHD1L-203ENST00000369259 PLA2G2DQ9UNK4 145 aa10.36□□□□□ -0.75
CHD1L-203ENST00000369259 LINC00476Q8WZB0 136 aa10.35□□□□□ -0.75
CHD1L-203ENST00000369259 H3BPC8 53 aa10.34□□□□□ -0.75
CHD1L-203ENST00000369259 ZNF462Q96JM2 2506 aa10.34□□□□□ -0.75
CHD1L-203ENST00000369259 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
CHD1L-203ENST00000369259 KRTAP10-3P60369 221 aa10.33□□□□□ -0.76
CHD1L-203ENST00000369259 H0Y9P7 68 aa10.33□□□□□ -0.76
CHD1L-203ENST00000369259 ATP11AUNQ6ZP68 121 aa10.33□□□□□ -0.76
CHD1L-203ENST00000369259 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
CHD1L-203ENST00000369259 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
CHD1L-203ENST00000369259 HIVEP2P31629 2446 aa10.33□□□□□ -0.76
CHD1L-203ENST00000369259 CCDC168Q8NDH2 2452 aa10.32□□□□□ -0.76
CHD1L-203ENST00000369259 IGLV5-37A0A075B6J1 123 aa10.32□□□□□ -0.76
CHD1L-203ENST00000369259 KRTAP29-1A8MX34 341 aaPredicted RBP10.32□□□□□ -0.76
CHD1L-203ENST00000369259 RBM12B-AS1Q9P1G2 102 aa10.32□□□□□ -0.76
CHD1L-203ENST00000369259 FAM168BA1KXE4 195 aa10.31□□□□□ -0.76
CHD1L-203ENST00000369259 TLX1NBP0CAT3 122 aa10.31□□□□□ -0.76
CHD1L-203ENST00000369259 LCA10Q71F78 164 aa10.31□□□□□ -0.76
CHD1L-203ENST00000369259 Q75L30 129 aa10.31□□□□□ -0.76
CHD1L-203ENST00000369259 FASNP49327 2511 aaKnown RBP10.31□□□□□ -0.76
CHD1L-203ENST00000369259 A0A0G2JQZ4 141 aa10.3□□□□□ -0.76
CHD1L-203ENST00000369259 A0A1W2PNN7 141 aa10.3□□□□□ -0.76
CHD1L-203ENST00000369259 IGFL1Q6UW32 110 aa10.3□□□□□ -0.76
CHD1L-203ENST00000369259 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
CHD1L-203ENST00000369259 LOC101927531A0A1B0GV80 90 aa10.28□□□□□ -0.76
CHD1L-203ENST00000369259 NDUFS5O43920 106 aa10.28□□□□□ -0.76
CHD1L-203ENST00000369259 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
CHD1L-203ENST00000369259 A0A087WSZ3 146 aa10.27□□□□□ -0.77
CHD1L-203ENST00000369259 A6NED7 52 aa10.27□□□□□ -0.77
CHD1L-203ENST00000369259 H3BNG1 76 aa10.27□□□□□ -0.77
CHD1L-203ENST00000369259 ANK3Q12955 4377 aaKnown RBP10.26□□□□□ -0.77
CHD1L-203ENST00000369259 C9orf163Q8N9P6 203 aa10.26□□□□□ -0.77
CHD1L-203ENST00000369259 CASC2Q6XLA1 102 aa10.26□□□□□ -0.77
CHD1L-203ENST00000369259 KRTAP7-1Q8IUC3 87 aa10.25□□□□□ -0.77
CHD1L-203ENST00000369259 A6NN06 94 aa10.25□□□□□ -0.77
CHD1L-203ENST00000369259 PHF5AQ7RTV0 110 aaKnown RBP10.25□□□□□ -0.77
CHD1L-203ENST00000369259 KRTAP1-1Q07627 177 aa10.24□□□□□ -0.77
CHD1L-203ENST00000369259 COA5Q86WW8 74 aa10.24□□□□□ -0.77
CHD1L-203ENST00000369259 FLNAP21333 2647 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms