RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
TPM3-213ENST00000368545 TRBV20-1A0A075B6N2 111 aa5.67□□□□□ -1.5
TPM3-213ENST00000368545 IGKV2-28A0A075B6P5 120 aa5.67□□□□□ -1.5
TPM3-213ENST00000368545 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
TPM3-213ENST00000368545 H7C2G1 150 aa5.67□□□□□ -1.5
TPM3-213ENST00000368545 IGKV2D-28P01615 120 aa5.67□□□□□ -1.5
TPM3-213ENST00000368545 COX6CP09669 75 aa5.67□□□□□ -1.5
TPM3-213ENST00000368545 C14orf177Q52M58 125 aa5.67□□□□□ -1.5
TPM3-213ENST00000368545 SCGB1C2P0DMR2 95 aa5.66□□□□□ -1.5
TPM3-213ENST00000368545 LINC00337Q8N6G1 96 aa5.66□□□□□ -1.5
TPM3-213ENST00000368545 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.5
TPM3-213ENST00000368545 C1orf134Q5TEV5 83 aa5.65□□□□□ -1.5
TPM3-213ENST00000368545 Q8NBF4 154 aa5.65□□□□□ -1.5
TPM3-213ENST00000368545 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
TPM3-213ENST00000368545 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
TPM3-213ENST00000368545 TRBV10-2A0A0K0K1G8 114 aa5.64□□□□□ -1.51
TPM3-213ENST00000368545 KRTAP29-1A8MX34 341 aaPredicted RBP5.63□□□□□ -1.51
TPM3-213ENST00000368545 LECT2O14960 151 aa5.63□□□□□ -1.51
TPM3-213ENST00000368545 RPL28P46779 137 aaKnown RBP5.63□□□□□ -1.51
TPM3-213ENST00000368545 CNBPP62633 177 aaKnown RBP5.63□□□□□ -1.51
TPM3-213ENST00000368545 TMEM126AQ9H061 195 aa5.63□□□□□ -1.51
TPM3-213ENST00000368545 TCL1BO95988 128 aa5.63□□□□□ -1.51
TPM3-213ENST00000368545 Q6ZR54 194 aa5.63□□□□□ -1.51
TPM3-213ENST00000368545 OR13C6PQ8NH95 151 aa5.63□□□□□ -1.51
TPM3-213ENST00000368545 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
TPM3-213ENST00000368545 H3BMG7 143 aa5.62□□□□□ -1.51
TPM3-213ENST00000368545 ATXN8Q156A1 80 aa5.62□□□□□ -1.51
TPM3-213ENST00000368545 Q6ZRN7 208 aaPredicted RBP5.62□□□□□ -1.51
TPM3-213ENST00000368545 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
TPM3-213ENST00000368545 DNAH11Q96DT5 4516 aa5.62□□□□□ -1.51
TPM3-213ENST00000368545 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
TPM3-213ENST00000368545 S100A7L2Q5SY68 101 aa5.62□□□□□ -1.51
TPM3-213ENST00000368545 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
TPM3-213ENST00000368545 LOC107984640A0A0U1RRK4 108 aa5.61□□□□□ -1.51
TPM3-213ENST00000368545 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
TPM3-213ENST00000368545 F8W1H4 67 aa5.61□□□□□ -1.51
TPM3-213ENST00000368545 NCR3O14931 201 aa5.61□□□□□ -1.51
TPM3-213ENST00000368545 WFDC2Q14508 124 aa5.61□□□□□ -1.51
TPM3-213ENST00000368545 SMIM11BQ8TCY0 68 aa5.61□□□□□ -1.51
TPM3-213ENST00000368545 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
TPM3-213ENST00000368545 LRCOL1A6NCL2 159 aa5.6□□□□□ -1.51
TPM3-213ENST00000368545 Q8NDZ9 215 aa5.6□□□□□ -1.51
TPM3-213ENST00000368545 DYNC1H1Q14204 4646 aaKnown RBP5.6□□□□□ -1.51
TPM3-213ENST00000368545 M0R2N4 97 aa5.6□□□□□ -1.51
TPM3-213ENST00000368545 LST1O00453 97 aa5.6□□□□□ -1.51
TPM3-213ENST00000368545 SIGMAR1Q99720 223 aa5.6□□□□□ -1.51
TPM3-213ENST00000368545 H0YGX0 51 aa5.59□□□□□ -1.51
TPM3-213ENST00000368545 PRR3P79522 188 aaKnown RBP5.59□□□□□ -1.51
TPM3-213ENST00000368545 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.52
TPM3-213ENST00000368545 M0R378 163 aa5.59□□□□□ -1.52
TPM3-213ENST00000368545 IGLV6-57P01721 117 aa5.59□□□□□ -1.52
TPM3-213ENST00000368545 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.52
TPM3-213ENST00000368545 CLEC2BQ92478 149 aa5.58□□□□□ -1.52
TPM3-213ENST00000368545 KMT2AQ03164 3969 aa5.58□□□□□ -1.52
TPM3-213ENST00000368545 NKAPP1Q8N9T2 125 aa5.57□□□□□ -1.52
TPM3-213ENST00000368545 DHRS4-AS1Q9P1J3 65 aa5.57□□□□□ -1.52
TPM3-213ENST00000368545 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
TPM3-213ENST00000368545 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.57□□□□□ -1.52
TPM3-213ENST00000368545 TRACP01848 142 aa5.57□□□□□ -1.52
TPM3-213ENST00000368545 Q8N814 137 aa5.57□□□□□ -1.52
TPM3-213ENST00000368545 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
TPM3-213ENST00000368545 TRAV23DV6A0A075B6W5 121 aa5.56□□□□□ -1.52
TPM3-213ENST00000368545 Q5VSD8 79 aa5.56□□□□□ -1.52
TPM3-213ENST00000368545 TRBV10-3A0A0K0K1G6 114 aa5.56□□□□□ -1.52
TPM3-213ENST00000368545 C9JAW5 83 aa5.56□□□□□ -1.52
TPM3-213ENST00000368545 OXTP01178 125 aa5.56□□□□□ -1.52
TPM3-213ENST00000368545 C9orf163Q8N9P6 203 aa5.56□□□□□ -1.52
TPM3-213ENST00000368545 A0A087WTM6 91 aa5.55□□□□□ -1.52
TPM3-213ENST00000368545 A0A1B0GX51 115 aa5.55□□□□□ -1.52
TPM3-213ENST00000368545 H3BT86 120 aa5.55□□□□□ -1.52
TPM3-213ENST00000368545 SLC25A20O43772 301 aa5.55□□□□□ -1.52
TPM3-213ENST00000368545 DNAH17Q9UFH2 4485 aa5.55□□□□□ -1.52
TPM3-213ENST00000368545 SNCGO76070 127 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 DNAL4O96015 105 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 C6orf99Q4VX62 202 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 DIRC1Q969H9 104 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 LINC01600Q96MT4 127 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 A0A096LNI7 61 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 ANKRD29Q8N6D5 301 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 LINC00474Q9P2X8 69 aa5.54□□□□□ -1.52
TPM3-213ENST00000368545 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
TPM3-213ENST00000368545 TRBV7-6A0A0J9YX20 115 aa5.53□□□□□ -1.52
TPM3-213ENST00000368545 ZNF73O43830 326 aaPredicted RBP5.53□□□□□ -1.52
TPM3-213ENST00000368545 A0A087WYN8 130 aa5.52□□□□□ -1.53
TPM3-213ENST00000368545 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
TPM3-213ENST00000368545 C7orf33Q8WU49 177 aa5.52□□□□□ -1.53
TPM3-213ENST00000368545 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
TPM3-213ENST00000368545 IGKV2-24A0A0C4DH68 120 aa5.51□□□□□ -1.53
TPM3-213ENST00000368545 FAM168BA1KXE4 195 aa5.51□□□□□ -1.53
TPM3-213ENST00000368545 FAM19A5Q7Z5A7 132 aaPredicted RBP5.51□□□□□ -1.53
TPM3-213ENST00000368545 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
TPM3-213ENST00000368545 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
TPM3-213ENST00000368545 ETDBQ3ZM63 59 aa5.51□□□□□ -1.53
TPM3-213ENST00000368545 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
TPM3-213ENST00000368545 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
TPM3-213ENST00000368545 COX7BP24311 80 aa5.5□□□□□ -1.53
TPM3-213ENST00000368545 ELOF1P60002 83 aaKnown RBP5.5□□□□□ -1.53
TPM3-213ENST00000368545 LINC00575Q6W349 94 aa5.5□□□□□ -1.53
TPM3-213ENST00000368545 SDIM1Q6ZPB5 146 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 272.2 ms