RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TMEM238C9JI98 176 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 NCR3O14931 201 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 LITAFQ99732 161 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 SPANXDQ9BXN6 97 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 PPDPFQ9H3Y8 114 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 SPANXCQ9NY87 97 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 RPL37AP8A6NKH3 93 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 H0Y9J4 135 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 RPL28P46779 137 aaKnown RBP2.42□□□□□ -2.02
CNOT4-202ENST00000356162 DAND5Q8N907 189 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 COPS9Q8WXC6 57 aa2.42□□□□□ -2.02
CNOT4-202ENST00000356162 ZNF861PO60384 105 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 UBE2AP49459 152 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 SOSTDC1Q6X4U4 206 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 SCGB1D4Q6XE38 83 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 Q6ZVH6 145 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 TTTY13Q9BZ97 58 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 IGKV2-28A0A075B6P5 120 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 IGKV2D-28P01615 120 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 IFITM1P13164 125 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 S100A12P80511 92 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 ADAMTSL4-AS1Q5T5F5 129 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 KRTAP13-1Q8IUC0 172 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 PCP2Q8IVA1 136 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 LINC00308Q8TCZ7 52 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 TMEM126AQ9H061 195 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 CBY1Q9Y3M2 126 aa2.41□□□□□ -2.02
CNOT4-202ENST00000356162 SPRR1AP35321 89 aa2.4□□□□□ -2.02
CNOT4-202ENST00000356162 LINC01600Q96MT4 127 aa2.4□□□□□ -2.02
CNOT4-202ENST00000356162 KCNQ1DNQ9H478 68 aa2.4□□□□□ -2.02
CNOT4-202ENST00000356162 TRBV10-3A0A0K0K1G6 114 aa2.4□□□□□ -2.03
CNOT4-202ENST00000356162 MT1HL1P0DM35 61 aa2.4□□□□□ -2.03
CNOT4-202ENST00000356162 DDTP30046 118 aa2.4□□□□□ -2.03
CNOT4-202ENST00000356162 NPC2P61916 151 aa2.4□□□□□ -2.03
CNOT4-202ENST00000356162 JOSD1Q15040 202 aaPredicted RBP2.4□□□□□ -2.03
CNOT4-202ENST00000356162 FAM19A1Q7Z5A9 133 aa2.4□□□□□ -2.03
CNOT4-202ENST00000356162 LINC00337Q8N6G1 96 aa2.4□□□□□ -2.03
CNOT4-202ENST00000356162 TNXBP22105 4242 aa2.4□□□□□ -2.03
CNOT4-202ENST00000356162 FLG2Q5D862 2391 aaPredicted RBP2.39□□□□□ -2.03
CNOT4-202ENST00000356162 ETDCA0A1B0GVM5 59 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 DLEU1O43261 78 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 IGLV6-57P01721 117 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 COX8AP10176 69 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 S100A7L2Q5SY68 101 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 VAMP8Q9BV40 100 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 TRAV23DV6A0A075B6W5 121 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 KRTAP1-4P0C5Y4 121 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 LINC00518Q8N0U6 118 aa2.39□□□□□ -2.03
CNOT4-202ENST00000356162 KRTAP4-16G5E9R7 235 aaPredicted RBP2.38□□□□□ -2.03
CNOT4-202ENST00000356162 PRLHP81277 87 aa2.38□□□□□ -2.03
CNOT4-202ENST00000356162 SPATA45Q537H7 98 aa2.38□□□□□ -2.03
CNOT4-202ENST00000356162 ZNF706Q9Y5V0 76 aaPredicted RBP2.38□□□□□ -2.03
CNOT4-202ENST00000356162 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
CNOT4-202ENST00000356162 RPL13AP40429 203 aaKnown RBP2.38□□□□□ -2.03
CNOT4-202ENST00000356162 FAM229BQ4G0N7 80 aa2.38□□□□□ -2.03
CNOT4-202ENST00000356162 PAM16Q9Y3D7 125 aa2.38□□□□□ -2.03
CNOT4-202ENST00000356162 KRTAP10-8P60410 259 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 MUSTN1Q8IVN3 82 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 HIGD1BQ9P298 99 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 SRRM2Q9UQ35 2752 aaKnown RBP2.37□□□□□ -2.03
CNOT4-202ENST00000356162 TRAV13-2A0A0B4J235 113 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 ZNF73O43830 326 aaPredicted RBP2.37□□□□□ -2.03
CNOT4-202ENST00000356162 PYY3Q5JQD4 70 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 SLC25A34Q6PIV7 304 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 Q6ZRX8 168 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 OR13C6PQ8NH95 151 aa2.37□□□□□ -2.03
CNOT4-202ENST00000356162 TRBV7-6A0A0J9YX20 115 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 HINT1P49773 126 aaPredicted RBP2.36□□□□□ -2.03
CNOT4-202ENST00000356162 PRR26Q8N8Z3 221 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 SMCR5Q8TEV8 140 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 SPRR4Q96PI1 79 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 HIST1H4GQ99525 98 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 HIGD2AQ9BW72 106 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 CRYGAP11844 174 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 TAL2Q16559 108 aa2.36□□□□□ -2.03
CNOT4-202ENST00000356162 A0A1B0GWB2 263 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 COX7BP24311 80 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 ELOF1P60002 83 aaKnown RBP2.35□□□□□ -2.03
CNOT4-202ENST00000356162 LINC00483Q53H64 154 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 C2orf91Q6ZV80 131 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 C14orf144Q96I85 54 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 Q9BRP9 147 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 DHRS4-AS1Q9P1J3 65 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 A6NDN8 102 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 TRIAP1O43715 76 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 UBE2V1Q13404 147 aa2.35□□□□□ -2.03
CNOT4-202ENST00000356162 DMBT1Q9UGM3 2413 aaPredicted RBP2.34□□□□□ -2.03
CNOT4-202ENST00000356162 A0A087X002 238 aa2.34□□□□□ -2.03
CNOT4-202ENST00000356162 A0A0B4J2C4 111 aa2.34□□□□□ -2.03
CNOT4-202ENST00000356162 C6orf99Q4VX62 202 aa2.34□□□□□ -2.03
CNOT4-202ENST00000356162 TYMSOSQ8TAI1 123 aa2.34□□□□□ -2.03
CNOT4-202ENST00000356162 ERC2-IT1O76042 136 aa2.34□□□□□ -2.04
CNOT4-202ENST00000356162 SMIM6P0DI80 62 aa2.34□□□□□ -2.04
CNOT4-202ENST00000356162 CTAG1AP78358 180 aa2.34□□□□□ -2.04
CNOT4-202ENST00000356162 HSD52Q0P140 79 aa2.34□□□□□ -2.04
CNOT4-202ENST00000356162 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.04
CNOT4-202ENST00000356162 UQCR10Q9UDW1 63 aa2.34□□□□□ -2.04
CNOT4-202ENST00000356162 CEND1Q8N111 149 aa2.33□□□□□ -2.04
CNOT4-202ENST00000356162 SMIM11BQ8TCY0 68 aa2.33□□□□□ -2.04
CNOT4-202ENST00000356162 NHP2Q9NX24 153 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms