RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TNP2Q05952 138 aa5.5□□□□□ -1.53
HTT-201ENST00000355072 SPINK1P00995 79 aa5.49□□□□□ -1.53
HTT-201ENST00000355072 PRR3P79522 188 aaKnown RBP5.49□□□□□ -1.53
HTT-201ENST00000355072 DNAH10OSP0CZ25 163 aa5.49□□□□□ -1.53
HTT-201ENST00000355072 SRCAPQ6ZRS2 3230 aa5.48□□□□□ -1.53
HTT-201ENST00000355072 LINC00528Q8N1L1 170 aa5.48□□□□□ -1.53
HTT-201ENST00000355072 ITPR3Q14573 2671 aa5.47□□□□□ -1.53
HTT-201ENST00000355072 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
HTT-201ENST00000355072 A0A1B0GVX0 72 aa5.46□□□□□ -1.53
HTT-201ENST00000355072 K7EQZ3 153 aa5.46□□□□□ -1.54
HTT-201ENST00000355072 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
HTT-201ENST00000355072 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
HTT-201ENST00000355072 UNC79Q9P2D8 2635 aa5.45□□□□□ -1.54
HTT-201ENST00000355072 C1orf134Q5TEV5 83 aa5.45□□□□□ -1.54
HTT-201ENST00000355072 CHD6Q8TD26 2715 aa5.44□□□□□ -1.54
HTT-201ENST00000355072 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
HTT-201ENST00000355072 A0A1W2PNU3 283 aaPredicted RBP5.44□□□□□ -1.54
HTT-201ENST00000355072 C15orf56Q8N910 161 aa5.44□□□□□ -1.54
HTT-201ENST00000355072 A8MTW9 85 aa5.44□□□□□ -1.54
HTT-201ENST00000355072 HELZ2Q9BYK8 2649 aaKnown RBP5.44□□□□□ -1.54
HTT-201ENST00000355072 SPRR4Q96PI1 79 aa5.44□□□□□ -1.54
HTT-201ENST00000355072 OCR1Q9BZK8 76 aa5.43□□□□□ -1.54
HTT-201ENST00000355072 CHTF8P0CG12 524 aa5.43□□□□□ -1.54
HTT-201ENST00000355072 COL6A5A8TX70 2615 aa5.43□□□□□ -1.54
HTT-201ENST00000355072 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
HTT-201ENST00000355072 Q9UF83 564 aa5.42□□□□□ -1.54
HTT-201ENST00000355072 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
HTT-201ENST00000355072 PRO3102Q9H379 93 aa5.4□□□□□ -1.55
HTT-201ENST00000355072 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.55
HTT-201ENST00000355072 MAP1AP78559 2803 aaPredicted RBP5.4□□□□□ -1.55
HTT-201ENST00000355072 ST20-AS1Q8NBB2 130 aa5.39□□□□□ -1.55
HTT-201ENST00000355072 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
HTT-201ENST00000355072 DNAH12Q6ZR08 3092 aa5.38□□□□□ -1.55
HTT-201ENST00000355072 H3BS24 57 aa5.38□□□□□ -1.55
HTT-201ENST00000355072 Q6ZSN1 163 aa5.38□□□□□ -1.55
HTT-201ENST00000355072 PHF5AQ7RTV0 110 aaKnown RBP5.38□□□□□ -1.55
HTT-201ENST00000355072 IGLV5-37A0A075B6J1 123 aa5.38□□□□□ -1.55
HTT-201ENST00000355072 TEX15Q9BXT5 2789 aa5.38□□□□□ -1.55
HTT-201ENST00000355072 IGFL1Q6UW32 110 aa5.38□□□□□ -1.55
HTT-201ENST00000355072 SETXQ7Z333 2677 aaKnown RBP5.37□□□□□ -1.55
HTT-201ENST00000355072 C8orf17Q9NRJ1 99 aa5.37□□□□□ -1.55
HTT-201ENST00000355072 UTP20O75691 2785 aaKnown RBP5.36□□□□□ -1.55
HTT-201ENST00000355072 DEFB116Q30KQ4 102 aa5.36□□□□□ -1.55
HTT-201ENST00000355072 A0A0C4DFX4 3053 aa5.34□□□□□ -1.55
HTT-201ENST00000355072 Q8NAQ8 132 aa5.34□□□□□ -1.55
HTT-201ENST00000355072 PLA2G2AP14555 144 aa5.34□□□□□ -1.55
HTT-201ENST00000355072 C10orf99Q6UWK7 81 aa5.34□□□□□ -1.55
HTT-201ENST00000355072 TEP1Q99973 2627 aaKnown RBP5.33□□□□□ -1.56
HTT-201ENST00000355072 CNBPP62633 177 aaKnown RBP5.33□□□□□ -1.56
HTT-201ENST00000355072 LINC00612Q8N6U2 182 aa5.33□□□□□ -1.56
HTT-201ENST00000355072 PCNTO95613 3336 aa5.33□□□□□ -1.56
HTT-201ENST00000355072 SPACA4Q8TDM5 124 aa5.32□□□□□ -1.56
HTT-201ENST00000355072 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
HTT-201ENST00000355072 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
HTT-201ENST00000355072 TYMSOSQ8TAI1 123 aa5.32□□□□□ -1.56
HTT-201ENST00000355072 ZNF861PO60384 105 aa5.32□□□□□ -1.56
HTT-201ENST00000355072 Q8N377 158 aa5.31□□□□□ -1.56
HTT-201ENST00000355072 INAFM1C9JVW0 142 aa5.31□□□□□ -1.56
HTT-201ENST00000355072 Q5XG85 94 aa5.3□□□□□ -1.56
HTT-201ENST00000355072 CSNK1G2-AS1Q8NCQ2 148 aa5.3□□□□□ -1.56
HTT-201ENST00000355072 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
HTT-201ENST00000355072 LY6G6CO95867 125 aa5.29□□□□□ -1.56
HTT-201ENST00000355072 GOLGB1Q14789 3259 aaKnown RBP5.29□□□□□ -1.56
HTT-201ENST00000355072 Q96NJ1 140 aa5.29□□□□□ -1.56
HTT-201ENST00000355072 C18orf65Q6ZTR6 163 aa5.28□□□□□ -1.56
HTT-201ENST00000355072 TRANK1O15050 2925 aa5.28□□□□□ -1.56
HTT-201ENST00000355072 ITPR2Q14571 2701 aa5.27□□□□□ -1.57
HTT-201ENST00000355072 LINC00304Q8N9R0 145 aa5.26□□□□□ -1.57
HTT-201ENST00000355072 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
HTT-201ENST00000355072 COX6B2Q6YFQ2 88 aa5.26□□□□□ -1.57
HTT-201ENST00000355072 RTL8CO15255 209 aa5.26□□□□□ -1.57
HTT-201ENST00000355072 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
HTT-201ENST00000355072 APCP25054 2843 aa5.25□□□□□ -1.57
HTT-201ENST00000355072 LAMA2P24043 3122 aaKnown RBP5.25□□□□□ -1.57
HTT-201ENST00000355072 PLA2G5P39877 138 aa5.25□□□□□ -1.57
HTT-201ENST00000355072 APLNQ9ULZ1 77 aa5.25□□□□□ -1.57
HTT-201ENST00000355072 A0A1B0GU33 70 aa5.24□□□□□ -1.57
HTT-201ENST00000355072 LINC00588Q9Y4M8 146 aa5.24□□□□□ -1.57
HTT-201ENST00000355072 C9orf163Q8N9P6 203 aa5.24□□□□□ -1.57
HTT-201ENST00000355072 HRES1P13985 223 aa5.24□□□□□ -1.57
HTT-201ENST00000355072 Q5VV11 94 aa5.23□□□□□ -1.57
HTT-201ENST00000355072 FAM229BQ4G0N7 80 aa5.22□□□□□ -1.57
HTT-201ENST00000355072 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
HTT-201ENST00000355072 ZNF292O60281 2723 aa5.22□□□□□ -1.57
HTT-201ENST00000355072 IGLV7-43P04211 117 aa5.21□□□□□ -1.58
HTT-201ENST00000355072 NSD1Q96L73 2696 aaPredicted RBP5.21□□□□□ -1.58
HTT-201ENST00000355072 M0R2N4 97 aa5.2□□□□□ -1.58
HTT-201ENST00000355072 UTRNP46939 3433 aa5.19□□□□□ -1.58
HTT-201ENST00000355072 FP248Q71RG6 208 aaPredicted RBP5.19□□□□□ -1.58
HTT-201ENST00000355072 DSCR10P59022 87 aa5.17□□□□□ -1.58
HTT-201ENST00000355072 CEP350Q5VT06 3117 aa5.17□□□□□ -1.58
HTT-201ENST00000355072 IGSF10Q6WRI0 2623 aa5.16□□□□□ -1.58
HTT-201ENST00000355072 ITPR1Q14643 2758 aa5.16□□□□□ -1.58
HTT-201ENST00000355072 A0A1W2PNM2 257 aa5.14□□□□□ -1.59
HTT-201ENST00000355072 KRTAP16-1A8MUX0 517 aa5.14□□□□□ -1.59
HTT-201ENST00000355072 ROMO1P60602 79 aa5.13□□□□□ -1.59
HTT-201ENST00000355072 Q6ZR54 194 aa5.13□□□□□ -1.59
HTT-201ENST00000355072 PSORS1C2Q9UIG4 136 aa5.13□□□□□ -1.59
HTT-201ENST00000355072 CFAP54Q96N23 3096 aa5.12□□□□□ -1.59
HTT-201ENST00000355072 FRYLO94915 3013 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms