RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 MIEN1Q9BRT3 115 aa9.16□□□□□ -0.94
PDGFA-201ENST00000354513 A0A0U1RQV1 116 aa9.15□□□□□ -0.94
PDGFA-201ENST00000354513 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
PDGFA-201ENST00000354513 TMEM126AQ9H061 195 aa9.15□□□□□ -0.94
PDGFA-201ENST00000354513 SPANXCQ9NY87 97 aa9.15□□□□□ -0.94
PDGFA-201ENST00000354513 LOC107984156A0A0G2JMH3 177 aa9.14□□□□□ -0.95
PDGFA-201ENST00000354513 M0R378 163 aa9.14□□□□□ -0.95
PDGFA-201ENST00000354513 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
PDGFA-201ENST00000354513 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
PDGFA-201ENST00000354513 ARL17AQ8IVW1 177 aa9.14□□□□□ -0.95
PDGFA-201ENST00000354513 LINC00308Q8TCZ7 52 aa9.14□□□□□ -0.95
PDGFA-201ENST00000354513 C12orf57Q99622 126 aa9.14□□□□□ -0.95
PDGFA-201ENST00000354513 TPRXLQ17RH7 258 aa9.13□□□□□ -0.95
PDGFA-201ENST00000354513 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
PDGFA-201ENST00000354513 Q6ZVH6 145 aa9.13□□□□□ -0.95
PDGFA-201ENST00000354513 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
PDGFA-201ENST00000354513 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
PDGFA-201ENST00000354513 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
PDGFA-201ENST00000354513 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
PDGFA-201ENST00000354513 PRO1933Q9H354 126 aa9.12□□□□□ -0.95
PDGFA-201ENST00000354513 UQCR10Q9UDW1 63 aa9.12□□□□□ -0.95
PDGFA-201ENST00000354513 IFITM1P13164 125 aa9.11□□□□□ -0.95
PDGFA-201ENST00000354513 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
PDGFA-201ENST00000354513 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
PDGFA-201ENST00000354513 HIGD1BQ9P298 99 aa9.11□□□□□ -0.95
PDGFA-201ENST00000354513 MUSTN1Q8IVN3 82 aa9.1□□□□□ -0.95
PDGFA-201ENST00000354513 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
PDGFA-201ENST00000354513 LINC00518Q8N0U6 118 aa9.09□□□□□ -0.95
PDGFA-201ENST00000354513 NCR3O14931 201 aa9.08□□□□□ -0.96
PDGFA-201ENST00000354513 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
PDGFA-201ENST00000354513 NDUFC2O95298 119 aa9.07□□□□□ -0.96
PDGFA-201ENST00000354513 PPDPFQ9H3Y8 114 aa9.07□□□□□ -0.96
PDGFA-201ENST00000354513 CTAG1AP78358 180 aa9.05□□□□□ -0.96
PDGFA-201ENST00000354513 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
PDGFA-201ENST00000354513 TRBV10-2A0A0K0K1G8 114 aa9.05□□□□□ -0.96
PDGFA-201ENST00000354513 TAL2Q16559 108 aa9.05□□□□□ -0.96
PDGFA-201ENST00000354513 SPRR4Q96PI1 79 aa9.05□□□□□ -0.96
PDGFA-201ENST00000354513 TSTD3H0UI37 97 aa9.04□□□□□ -0.96
PDGFA-201ENST00000354513 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
PDGFA-201ENST00000354513 A4D1N5 150 aa9.02□□□□□ -0.97
PDGFA-201ENST00000354513 HSD52Q0P140 79 aa9.02□□□□□ -0.97
PDGFA-201ENST00000354513 S100A7L2Q5SY68 101 aa9.02□□□□□ -0.97
PDGFA-201ENST00000354513 CEND1Q8N111 149 aa9.02□□□□□ -0.97
PDGFA-201ENST00000354513 TRBV10-3A0A0K0K1G6 114 aa9.01□□□□□ -0.97
PDGFA-201ENST00000354513 DDTP30046 118 aa9.01□□□□□ -0.97
PDGFA-201ENST00000354513 OR13C6PQ8NH95 151 aa9.01□□□□□ -0.97
PDGFA-201ENST00000354513 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
PDGFA-201ENST00000354513 SPRR1AP35321 89 aa8.99□□□□□ -0.97
PDGFA-201ENST00000354513 LINC00337Q8N6G1 96 aa8.99□□□□□ -0.97
PDGFA-201ENST00000354513 A6NDN8 102 aa8.98□□□□□ -0.97
PDGFA-201ENST00000354513 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
PDGFA-201ENST00000354513 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
PDGFA-201ENST00000354513 PRYO14603 147 aa8.97□□□□□ -0.97
PDGFA-201ENST00000354513 FXYD2P54710 66 aa8.97□□□□□ -0.97
PDGFA-201ENST00000354513 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
PDGFA-201ENST00000354513 SPAG11AQ6PDA7 123 aa8.97□□□□□ -0.97
PDGFA-201ENST00000354513 TMEM238LA0A1B0GVL6 79 aa8.96□□□□□ -0.98
PDGFA-201ENST00000354513 A6NJY4 79 aa8.96□□□□□ -0.98
PDGFA-201ENST00000354513 Q8NBF4 154 aa8.96□□□□□ -0.98
PDGFA-201ENST00000354513 KRTAP4-1Q9BYQ7 146 aa8.96□□□□□ -0.98
PDGFA-201ENST00000354513 KCNQ1DNQ9H478 68 aa8.96□□□□□ -0.98
PDGFA-201ENST00000354513 FP248Q71RG6 208 aaPredicted RBP8.95□□□□□ -0.98
PDGFA-201ENST00000354513 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
PDGFA-201ENST00000354513 TRAV23DV6A0A075B6W5 121 aa8.94□□□□□ -0.98
PDGFA-201ENST00000354513 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
PDGFA-201ENST00000354513 CFC1BP0CG36 223 aa8.94□□□□□ -0.98
PDGFA-201ENST00000354513 CFC1P0CG37 223 aa8.94□□□□□ -0.98
PDGFA-201ENST00000354513 RAB37Q96AX2 223 aa8.94□□□□□ -0.98
PDGFA-201ENST00000354513 CBY1Q9Y3M2 126 aa8.94□□□□□ -0.98
PDGFA-201ENST00000354513 LINC00483Q53H64 154 aa8.93□□□□□ -0.98
PDGFA-201ENST00000354513 ZNF706Q9Y5V0 76 aaPredicted RBP8.93□□□□□ -0.98
PDGFA-201ENST00000354513 A0A0B4J2C4 111 aa8.92□□□□□ -0.98
PDGFA-201ENST00000354513 HINT1P49773 126 aaPredicted RBP8.92□□□□□ -0.98
PDGFA-201ENST00000354513 BVES-AS1Q5T3Y7 98 aa8.92□□□□□ -0.98
PDGFA-201ENST00000354513 M0R143 59 aa8.91□□□□□ -0.98
PDGFA-201ENST00000354513 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
PDGFA-201ENST00000354513 NHP2Q9NX24 153 aaKnown RBP8.91□□□□□ -0.98
PDGFA-201ENST00000354513 ETDCA0A1B0GVM5 59 aa8.9□□□□□ -0.98
PDGFA-201ENST00000354513 ZNF73O43830 326 aaPredicted RBP8.9□□□□□ -0.98
PDGFA-201ENST00000354513 ERC2-IT1O76042 136 aa8.9□□□□□ -0.98
PDGFA-201ENST00000354513 B5MCH6 92 aa8.88□□□□□ -0.99
PDGFA-201ENST00000354513 H7C2G1 150 aa8.88□□□□□ -0.99
PDGFA-201ENST00000354513 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
PDGFA-201ENST00000354513 PRO1854Q9UHT4 67 aa8.88□□□□□ -0.99
PDGFA-201ENST00000354513 K7ERJ3 54 aa8.87□□□□□ -0.99
PDGFA-201ENST00000354513 C6orf99Q4VX62 202 aa8.87□□□□□ -0.99
PDGFA-201ENST00000354513 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
PDGFA-201ENST00000354513 Q9BRP9 147 aa8.87□□□□□ -0.99
PDGFA-201ENST00000354513 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
PDGFA-201ENST00000354513 SPINK1P00995 79 aa8.86□□□□□ -0.99
PDGFA-201ENST00000354513 Q8N377 158 aa8.86□□□□□ -0.99
PDGFA-201ENST00000354513 MOBPQ13875 183 aa8.85□□□□□ -0.99
PDGFA-201ENST00000354513 Q1RN00 199 aa8.85□□□□□ -0.99
PDGFA-201ENST00000354513 BATFQ16520 125 aa8.84□□□□□ -0.99
PDGFA-201ENST00000354513 GAGE2AQ6NT46 116 aa8.84□□□□□ -0.99
PDGFA-201ENST00000354513 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
PDGFA-201ENST00000354513 COX7BP24311 80 aa8.83□□□□□ -1
PDGFA-201ENST00000354513 Q6ZRX8 168 aa8.83□□□□□ -1
PDGFA-201ENST00000354513 IGLV9-49A0A0B4J1Y8 123 aa8.82□□□□□ -1
PDGFA-201ENST00000354513 RPS29P62273 56 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms