RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 IGLV5-45A0A087WSX0 123 aa7.81□□□□□ -1.16
SHANK2-201ENST00000338508 POLQO75417 2590 aa7.81□□□□□ -1.16
SHANK2-201ENST00000338508 IGLV1-50A0A075B6I6 118 aa7.8□□□□□ -1.16
SHANK2-201ENST00000338508 LINC01546A6NGU7 62 aa7.8□□□□□ -1.16
SHANK2-201ENST00000338508 ZNF861PO60384 105 aa7.79□□□□□ -1.16
SHANK2-201ENST00000338508 C10orf142B7Z368 130 aa7.79□□□□□ -1.16
SHANK2-201ENST00000338508 K7EIL1 84 aa7.78□□□□□ -1.16
SHANK2-201ENST00000338508 SPTBN4Q9H254 2564 aa7.78□□□□□ -1.16
SHANK2-201ENST00000338508 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
SHANK2-201ENST00000338508 LUZP6Q538Z0 58 aa7.78□□□□□ -1.16
SHANK2-201ENST00000338508 PRR15Q8IV56 129 aa7.77□□□□□ -1.17
SHANK2-201ENST00000338508 CR1P17927 2039 aa7.77□□□□□ -1.17
SHANK2-201ENST00000338508 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
SHANK2-201ENST00000338508 ANKRD11Q6UB99 2663 aaPredicted RBP7.76□□□□□ -1.17
SHANK2-201ENST00000338508 MTORP42345 2549 aa7.75□□□□□ -1.17
SHANK2-201ENST00000338508 USP24Q9UPU5 2620 aa7.75□□□□□ -1.17
SHANK2-201ENST00000338508 COL4A2P08572 1712 aa7.75□□□□□ -1.17
SHANK2-201ENST00000338508 A0A087WTM6 91 aa7.74□□□□□ -1.17
SHANK2-201ENST00000338508 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
SHANK2-201ENST00000338508 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
SHANK2-201ENST00000338508 PRO0461Q9UI25 63 aa7.73□□□□□ -1.17
SHANK2-201ENST00000338508 USP9YO00507 2555 aaPredicted RBP7.72□□□□□ -1.17
SHANK2-201ENST00000338508 CYP4F30PQ9H0H9 118 aa7.72□□□□□ -1.17
SHANK2-201ENST00000338508 Q8N377 158 aa7.71□□□□□ -1.17
SHANK2-201ENST00000338508 KCNQ1DNQ9H478 68 aa7.71□□□□□ -1.18
SHANK2-201ENST00000338508 LINC00528Q8N1L1 170 aa7.71□□□□□ -1.18
SHANK2-201ENST00000338508 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
SHANK2-201ENST00000338508 Q6ZSA8 131 aa7.7□□□□□ -1.18
SHANK2-201ENST00000338508 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
SHANK2-201ENST00000338508 LINC00336Q6ZUF6 198 aa7.7□□□□□ -1.18
SHANK2-201ENST00000338508 FAM104AQ969W3 186 aa7.69□□□□□ -1.18
SHANK2-201ENST00000338508 FLG2Q5D862 2391 aaPredicted RBP7.69□□□□□ -1.18
SHANK2-201ENST00000338508 FASNP49327 2511 aaKnown RBP7.67□□□□□ -1.18
SHANK2-201ENST00000338508 CASC10Q5T4H9 136 aa7.66□□□□□ -1.18
SHANK2-201ENST00000338508 LITAFQ99732 161 aa7.66□□□□□ -1.18
SHANK2-201ENST00000338508 CHD8Q9HCK8 2581 aa7.65□□□□□ -1.19
SHANK2-201ENST00000338508 EIF4EBP3O60516 100 aaPredicted RBP7.64□□□□□ -1.19
SHANK2-201ENST00000338508 WIPF1O43516 503 aa7.64□□□□□ -1.19
SHANK2-201ENST00000338508 ERC2-IT1O76042 136 aa7.64□□□□□ -1.19
SHANK2-201ENST00000338508 LINC00483Q53H64 154 aa7.63□□□□□ -1.19
SHANK2-201ENST00000338508 PRR26Q8N8Z3 221 aa7.62□□□□□ -1.19
SHANK2-201ENST00000338508 KRTAP10-3P60369 221 aa7.62□□□□□ -1.19
SHANK2-201ENST00000338508 CD164Q04900 197 aa7.62□□□□□ -1.19
SHANK2-201ENST00000338508 IGLV7-46A0A075B6I9 117 aa7.59□□□□□ -1.19
SHANK2-201ENST00000338508 C9orf163Q8N9P6 203 aa7.59□□□□□ -1.19
SHANK2-201ENST00000338508 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
SHANK2-201ENST00000338508 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
SHANK2-201ENST00000338508 LCA10Q71F78 164 aa7.57□□□□□ -1.2
SHANK2-201ENST00000338508 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
SHANK2-201ENST00000338508 PLA2G2DQ9UNK4 145 aa7.57□□□□□ -1.2
SHANK2-201ENST00000338508 C19orf73Q9NVV2 129 aa7.56□□□□□ -1.2
SHANK2-201ENST00000338508 TLX1NBP0CAT3 122 aa7.56□□□□□ -1.2
SHANK2-201ENST00000338508 TNP2Q05952 138 aa7.54□□□□□ -1.2
SHANK2-201ENST00000338508 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
SHANK2-201ENST00000338508 Q1T7F1 81 aa7.53□□□□□ -1.2
SHANK2-201ENST00000338508 H7BZZ5 65 aa7.51□□□□□ -1.21
SHANK2-201ENST00000338508 PRRC2CQ9Y520 2896 aaKnown RBP7.51□□□□□ -1.21
SHANK2-201ENST00000338508 CEP295Q9C0D2 2601 aa7.51□□□□□ -1.21
SHANK2-201ENST00000338508 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
SHANK2-201ENST00000338508 A0A1B0GU33 70 aa7.49□□□□□ -1.21
SHANK2-201ENST00000338508 A0A1W2PNM2 257 aa7.49□□□□□ -1.21
SHANK2-201ENST00000338508 GIG44P09565 113 aaPredicted RBP7.49□□□□□ -1.21
SHANK2-201ENST00000338508 CEP350Q5VT06 3117 aa7.48□□□□□ -1.21
SHANK2-201ENST00000338508 S4R3F8 94 aa7.47□□□□□ -1.21
SHANK2-201ENST00000338508 MGAM2Q2M2H8 2515 aa7.45□□□□□ -1.22
SHANK2-201ENST00000338508 DNAH12Q6ZR08 3092 aa7.43□□□□□ -1.22
SHANK2-201ENST00000338508 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.43□□□□□ -1.22
SHANK2-201ENST00000338508 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
SHANK2-201ENST00000338508 HRES1P13985 223 aa7.41□□□□□ -1.22
SHANK2-201ENST00000338508 UTRNP46939 3433 aa7.41□□□□□ -1.22
SHANK2-201ENST00000338508 SPANXA2-OT1Q8N9U9 137 aa7.4□□□□□ -1.22
SHANK2-201ENST00000338508 EPG5Q9HCE0 2579 aa7.4□□□□□ -1.23
SHANK2-201ENST00000338508 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
SHANK2-201ENST00000338508 R4GN34 69 aa7.39□□□□□ -1.23
SHANK2-201ENST00000338508 C5orf42Q9H799 3197 aa7.39□□□□□ -1.23
SHANK2-201ENST00000338508 SPINK7P58062 85 aa7.35□□□□□ -1.23
SHANK2-201ENST00000338508 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
SHANK2-201ENST00000338508 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
SHANK2-201ENST00000338508 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
SHANK2-201ENST00000338508 DMAC1Q96GE9 116 aa7.31□□□□□ -1.24
SHANK2-201ENST00000338508 A0A0A0MQY5 61 aa7.3□□□□□ -1.24
SHANK2-201ENST00000338508 Q5VSD8 79 aa7.3□□□□□ -1.24
SHANK2-201ENST00000338508 A0A096LNT2 108 aa7.3□□□□□ -1.24
SHANK2-201ENST00000338508 HECTD1Q9ULT8 2610 aa7.3□□□□□ -1.24
SHANK2-201ENST00000338508 ATRQ13535 2644 aa7.3□□□□□ -1.24
SHANK2-201ENST00000338508 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
SHANK2-201ENST00000338508 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
SHANK2-201ENST00000338508 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
SHANK2-201ENST00000338508 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
SHANK2-201ENST00000338508 KLK9Q2XQG4 91 aa7.26□□□□□ -1.25
SHANK2-201ENST00000338508 H3BS24 57 aa7.26□□□□□ -1.25
SHANK2-201ENST00000338508 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
SHANK2-201ENST00000338508 PCNTO95613 3336 aa7.25□□□□□ -1.25
SHANK2-201ENST00000338508 M0QZ58 72 aa7.25□□□□□ -1.25
SHANK2-201ENST00000338508 FLNBO75369 2602 aaKnown RBP7.24□□□□□ -1.25
SHANK2-201ENST00000338508 MAST4O15021 2626 aa7.23□□□□□ -1.25
SHANK2-201ENST00000338508 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
SHANK2-201ENST00000338508 AKAP13Q12802 2813 aa7.22□□□□□ -1.25
SHANK2-201ENST00000338508 Q75L30 129 aa7.21□□□□□ -1.25
SHANK2-201ENST00000338508 Q5W150 140 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms