RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
CDCA4-201ENST00000336219 EPM2AB3EWF7 344 aa13.09□□□□□ -0.31
CDCA4-201ENST00000336219 NREPQ16612 68 aa13.07□□□□□ -0.32
CDCA4-201ENST00000336219 BPY2O14599 106 aa13.07□□□□□ -0.32
CDCA4-201ENST00000336219 C1orf43Q9BWL3 253 aa13.06□□□□□ -0.32
CDCA4-201ENST00000336219 C3orf84H3BNL1 204 aa13.06□□□□□ -0.32
CDCA4-201ENST00000336219 Q6ZRP5 223 aa13.06□□□□□ -0.32
CDCA4-201ENST00000336219 DEFB105AQ8NG35 78 aa13.05□□□□□ -0.32
CDCA4-201ENST00000336219 LINC01556Q5JQF7 62 aa13.03□□□□□ -0.32
CDCA4-201ENST00000336219 IGKV4-1P06312 121 aa13.03□□□□□ -0.32
CDCA4-201ENST00000336219 IGKV2D-24A0A075B6R9 120 aa13.02□□□□□ -0.33
CDCA4-201ENST00000336219 FP248Q71RG6 208 aaPredicted RBP13.01□□□□□ -0.33
CDCA4-201ENST00000336219 TMEM254Q8TBM7 123 aa13□□□□□ -0.33
CDCA4-201ENST00000336219 F8WDY8 70 aa12.99□□□□□ -0.33
CDCA4-201ENST00000336219 LINC00474Q9P2X8 69 aa12.99□□□□□ -0.33
CDCA4-201ENST00000336219 DEFB131BA0A096LNP1 70 aa12.99□□□□□ -0.33
CDCA4-201ENST00000336219 SYCNQ0VAF6 134 aa12.99□□□□□ -0.33
CDCA4-201ENST00000336219 SERTAD4-AS1Q5TG53 156 aa12.98□□□□□ -0.33
CDCA4-201ENST00000336219 TENM3Q9P273 2699 aa12.98□□□□□ -0.33
CDCA4-201ENST00000336219 ANK2Q01484 3957 aa12.96□□□□□ -0.33
CDCA4-201ENST00000336219 Q8N377 158 aa12.96□□□□□ -0.34
CDCA4-201ENST00000336219 C11orf45Q8TAV5 145 aa12.96□□□□□ -0.34
CDCA4-201ENST00000336219 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
CDCA4-201ENST00000336219 C7orf33Q8WU49 177 aa12.93□□□□□ -0.34
CDCA4-201ENST00000336219 OCR1Q9BZK8 76 aa12.93□□□□□ -0.34
CDCA4-201ENST00000336219 NDUFC1O43677 76 aa12.93□□□□□ -0.34
CDCA4-201ENST00000336219 KCNQ1DNQ9H478 68 aa12.93□□□□□ -0.34
CDCA4-201ENST00000336219 DNAH10OSP0CZ25 163 aa12.92□□□□□ -0.34
CDCA4-201ENST00000336219 NKAPP1Q8N9T2 125 aa12.92□□□□□ -0.34
CDCA4-201ENST00000336219 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
CDCA4-201ENST00000336219 SMIM26A0A096LP01 95 aa12.92□□□□□ -0.34
CDCA4-201ENST00000336219 RPL37AP8A6NKH3 93 aa12.92□□□□□ -0.34
CDCA4-201ENST00000336219 FAM229BQ4G0N7 80 aa12.91□□□□□ -0.34
CDCA4-201ENST00000336219 HIGD2AQ9BW72 106 aa12.9□□□□□ -0.34
CDCA4-201ENST00000336219 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
CDCA4-201ENST00000336219 A0A0U1RQV1 116 aa12.88□□□□□ -0.35
CDCA4-201ENST00000336219 PRYO14603 147 aa12.87□□□□□ -0.35
CDCA4-201ENST00000336219 TLX1NBP0CAT3 122 aa12.87□□□□□ -0.35
CDCA4-201ENST00000336219 ST20-AS1Q8NBB2 130 aa12.87□□□□□ -0.35
CDCA4-201ENST00000336219 FAM30AQ9NZY2 134 aa12.87□□□□□ -0.35
CDCA4-201ENST00000336219 KRTAP24-1Q3LI83 254 aa12.86□□□□□ -0.35
CDCA4-201ENST00000336219 Q9BRP9 147 aa12.86□□□□□ -0.35
CDCA4-201ENST00000336219 A0A1W2PNM2 257 aa12.86□□□□□ -0.35
CDCA4-201ENST00000336219 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
CDCA4-201ENST00000336219 ERC2-IT1O76042 136 aa12.85□□□□□ -0.35
CDCA4-201ENST00000336219 PLA2G2DQ9UNK4 145 aa12.85□□□□□ -0.35
CDCA4-201ENST00000336219 IGLV5-48A0A075B6I7 105 aa12.85□□□□□ -0.35
CDCA4-201ENST00000336219 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
CDCA4-201ENST00000336219 F8P00451 2351 aa12.82□□□□□ -0.36
CDCA4-201ENST00000336219 ATP5EP56381 51 aaPredicted RBP12.82□□□□□ -0.36
CDCA4-201ENST00000336219 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
CDCA4-201ENST00000336219 MPLKIPQ8TAP9 179 aa12.82□□□□□ -0.36
CDCA4-201ENST00000336219 MRAPQ8TCY5 172 aa12.82□□□□□ -0.36
CDCA4-201ENST00000336219 CASC10Q5T4H9 136 aa12.81□□□□□ -0.36
CDCA4-201ENST00000336219 Q6ZRX8 168 aa12.81□□□□□ -0.36
CDCA4-201ENST00000336219 KRTAP4-16G5E9R7 235 aaPredicted RBP12.8□□□□□ -0.36
CDCA4-201ENST00000336219 STAB1Q9NY15 2570 aa12.8□□□□□ -0.36
CDCA4-201ENST00000336219 FUSP35637 526 aaKnown RBP eCLIP12.8□□□□□ -0.36
CDCA4-201ENST00000336219 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
CDCA4-201ENST00000336219 DHRS4-AS1Q9P1J3 65 aa12.8□□□□□ -0.36
CDCA4-201ENST00000336219 IGLV5-37A0A075B6J1 123 aa12.79□□□□□ -0.36
CDCA4-201ENST00000336219 IGLV1-50A0A075B6I6 118 aa12.79□□□□□ -0.36
CDCA4-201ENST00000336219 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
CDCA4-201ENST00000336219 PRO0628Q9UI54 55 aa12.78□□□□□ -0.36
CDCA4-201ENST00000336219 SPRR1AP35321 89 aa12.77□□□□□ -0.37
CDCA4-201ENST00000336219 DNAH3Q8TD57 4116 aa12.77□□□□□ -0.37
CDCA4-201ENST00000336219 A0A0G2JQZ4 141 aa12.76□□□□□ -0.37
CDCA4-201ENST00000336219 ETDCA0A1B0GVM5 59 aa12.76□□□□□ -0.37
CDCA4-201ENST00000336219 A0A1W2PNN7 141 aa12.76□□□□□ -0.37
CDCA4-201ENST00000336219 TNP2Q05952 138 aa12.76□□□□□ -0.37
CDCA4-201ENST00000336219 FBN1P35555 2871 aaKnown RBP12.76□□□□□ -0.37
CDCA4-201ENST00000336219 DNAH1Q9P2D7 4330 aa12.74□□□□□ -0.37
CDCA4-201ENST00000336219 Q8NBF4 154 aa12.73□□□□□ -0.37
CDCA4-201ENST00000336219 K7EQZ3 153 aa12.72□□□□□ -0.37
CDCA4-201ENST00000336219 DSCR10P59022 87 aa12.72□□□□□ -0.37
CDCA4-201ENST00000336219 MRPL55Q7Z7F7 128 aaKnown RBP12.7□□□□□ -0.38
CDCA4-201ENST00000336219 BRK1Q8WUW1 75 aa12.69□□□□□ -0.38
CDCA4-201ENST00000336219 UBE2BP63146 152 aa12.69□□□□□ -0.38
CDCA4-201ENST00000336219 NOTCH1P46531 2555 aa12.69□□□□□ -0.38
CDCA4-201ENST00000336219 MAST4O15021 2626 aa12.68□□□□□ -0.38
CDCA4-201ENST00000336219 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
CDCA4-201ENST00000336219 A0A1B0GW54 56 aa12.68□□□□□ -0.38
CDCA4-201ENST00000336219 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
CDCA4-201ENST00000336219 PRB2P02812 416 aaPredicted RBP12.67□□□□□ -0.38
CDCA4-201ENST00000336219 DEFB116Q30KQ4 102 aa12.67□□□□□ -0.38
CDCA4-201ENST00000336219 SPRR4Q96PI1 79 aa12.66□□□□□ -0.38
CDCA4-201ENST00000336219 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
CDCA4-201ENST00000336219 LCE6AA0A183 80 aa12.63□□□□□ -0.39
CDCA4-201ENST00000336219 LINC00476Q8WZB0 136 aa12.62□□□□□ -0.39
CDCA4-201ENST00000336219 DNAH10Q8IVF4 4471 aa12.62□□□□□ -0.39
CDCA4-201ENST00000336219 REG3GQ6UW15 175 aa12.61□□□□□ -0.39
CDCA4-201ENST00000336219 PRR4Q16378 134 aa12.61□□□□□ -0.39
CDCA4-201ENST00000336219 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.6□□□□□ -0.39
CDCA4-201ENST00000336219 HUWE1Q7Z6Z7 4374 aaKnown RBP12.59□□□□□ -0.39
CDCA4-201ENST00000336219 hDV103S1A0JD37 113 aa12.59□□□□□ -0.39
CDCA4-201ENST00000336219 ZCCHC13Q8WW36 166 aaKnown RBP12.59□□□□□ -0.39
CDCA4-201ENST00000336219 K7EIL1 84 aa12.58□□□□□ -0.4
CDCA4-201ENST00000336219 PSCAO43653 123 aa12.58□□□□□ -0.4
CDCA4-201ENST00000336219 C1orf64Q8NEQ6 169 aa12.58□□□□□ -0.4
CDCA4-201ENST00000336219 HCG22E2RYF7 251 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms