RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 IGLV6-57P01721 117 aa11.27□□□□□ -0.61
PACS1-201ENST00000320580 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
PACS1-201ENST00000320580 PSCAO43653 123 aa11.26□□□□□ -0.61
PACS1-201ENST00000320580 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
PACS1-201ENST00000320580 CASC2Q6XLA1 102 aa11.24□□□□□ -0.61
PACS1-201ENST00000320580 A0A087WSZ3 146 aa11.24□□□□□ -0.61
PACS1-201ENST00000320580 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
PACS1-201ENST00000320580 UNC79Q9P2D8 2635 aa11.23□□□□□ -0.61
PACS1-201ENST00000320580 EPM2AB3EWF7 344 aa11.22□□□□□ -0.61
PACS1-201ENST00000320580 OCR1Q9BZK8 76 aa11.22□□□□□ -0.61
PACS1-201ENST00000320580 Q6ZRU5 148 aa11.22□□□□□ -0.61
PACS1-201ENST00000320580 INAFM1C9JVW0 142 aa11.22□□□□□ -0.61
PACS1-201ENST00000320580 IGKV2-24A0A0C4DH68 120 aa11.21□□□□□ -0.61
PACS1-201ENST00000320580 KTN1-AS1Q86SY8 53 aa11.21□□□□□ -0.61
PACS1-201ENST00000320580 FSHBP01225 129 aa11.2□□□□□ -0.62
PACS1-201ENST00000320580 GCN1Q92616 2671 aaKnown RBP11.19□□□□□ -0.62
PACS1-201ENST00000320580 SMG1Q96Q15 3661 aaKnown RBP11.19□□□□□ -0.62
PACS1-201ENST00000320580 ITPR2Q14571 2701 aa11.19□□□□□ -0.62
PACS1-201ENST00000320580 ATRQ13535 2644 aa11.19□□□□□ -0.62
PACS1-201ENST00000320580 K7EQZ3 153 aa11.19□□□□□ -0.62
PACS1-201ENST00000320580 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.18□□□□□ -0.62
PACS1-201ENST00000320580 SPAG11AQ6PDA7 123 aa11.18□□□□□ -0.62
PACS1-201ENST00000320580 DCHS2Q6V1P9 2916 aa11.18□□□□□ -0.62
PACS1-201ENST00000320580 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
PACS1-201ENST00000320580 TEX15Q9BXT5 2789 aa11.18□□□□□ -0.62
PACS1-201ENST00000320580 ASH1LQ9NR48 2969 aaKnown RBP11.17□□□□□ -0.62
PACS1-201ENST00000320580 Q8NBF4 154 aa11.17□□□□□ -0.62
PACS1-201ENST00000320580 Q1T7F1 81 aa11.17□□□□□ -0.62
PACS1-201ENST00000320580 CR1P17927 2039 aa11.16□□□□□ -0.62
PACS1-201ENST00000320580 IGLV1-51P01701 117 aa11.16□□□□□ -0.62
PACS1-201ENST00000320580 Q6ZRP5 223 aa11.15□□□□□ -0.62
PACS1-201ENST00000320580 Q6ZTC4 211 aa11.15□□□□□ -0.62
PACS1-201ENST00000320580 ZANQ9Y493 2812 aa11.14□□□□□ -0.63
PACS1-201ENST00000320580 HRNRQ86YZ3 2850 aaPredicted RBP11.13□□□□□ -0.63
PACS1-201ENST00000320580 ST20-AS1Q8NBB2 130 aa11.13□□□□□ -0.63
PACS1-201ENST00000320580 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
PACS1-201ENST00000320580 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
PACS1-201ENST00000320580 RBM12B-AS1Q9P1G2 102 aa11.12□□□□□ -0.63
PACS1-201ENST00000320580 LINC00528Q8N1L1 170 aa11.11□□□□□ -0.63
PACS1-201ENST00000320580 VPREB1P12018 145 aa11.11□□□□□ -0.63
PACS1-201ENST00000320580 CELSR2Q9HCU4 2923 aa11.1□□□□□ -0.63
PACS1-201ENST00000320580 CYP4F30PQ9H0H9 118 aa11.1□□□□□ -0.63
PACS1-201ENST00000320580 A0A1B0GW54 56 aa11.09□□□□□ -0.63
PACS1-201ENST00000320580 RPL37AP61513 92 aaKnown RBP11.07□□□□□ -0.64
PACS1-201ENST00000320580 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
PACS1-201ENST00000320580 Q8NDZ9 215 aa11.05□□□□□ -0.64
PACS1-201ENST00000320580 COA5Q86WW8 74 aa11.05□□□□□ -0.64
PACS1-201ENST00000320580 Q8N377 158 aa11.04□□□□□ -0.64
PACS1-201ENST00000320580 C7orf65Q6ZTY9 151 aa11.03□□□□□ -0.64
PACS1-201ENST00000320580 LOC101927531A0A1B0GV80 90 aa11.03□□□□□ -0.64
PACS1-201ENST00000320580 LINC00476Q8WZB0 136 aa11.02□□□□□ -0.64
PACS1-201ENST00000320580 GVQW2A0A096LPI5 108 aaPredicted RBP11.02□□□□□ -0.65
PACS1-201ENST00000320580 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
PACS1-201ENST00000320580 Q9BRP9 147 aa11.01□□□□□ -0.65
PACS1-201ENST00000320580 APCP25054 2843 aa11.01□□□□□ -0.65
PACS1-201ENST00000320580 GIG44P09565 113 aaPredicted RBP11.01□□□□□ -0.65
PACS1-201ENST00000320580 Q6ZRX8 168 aa11.01□□□□□ -0.65
PACS1-201ENST00000320580 MAST4O15021 2626 aa11.01□□□□□ -0.65
PACS1-201ENST00000320580 H3BPC8 53 aa11□□□□□ -0.65
PACS1-201ENST00000320580 A0A1W2PNM2 257 aa11□□□□□ -0.65
PACS1-201ENST00000320580 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
PACS1-201ENST00000320580 PRLHP81277 87 aa10.99□□□□□ -0.65
PACS1-201ENST00000320580 A0A0G2JQZ4 141 aa10.98□□□□□ -0.65
PACS1-201ENST00000320580 A0A1W2PNN7 141 aa10.98□□□□□ -0.65
PACS1-201ENST00000320580 DEFB131BA0A096LNP1 70 aa10.97□□□□□ -0.65
PACS1-201ENST00000320580 X6R8D5 127 aa10.97□□□□□ -0.65
PACS1-201ENST00000320580 LCA10Q71F78 164 aa10.97□□□□□ -0.65
PACS1-201ENST00000320580 BAHCC1Q9P281 2608 aa10.96□□□□□ -0.65
PACS1-201ENST00000320580 CSNK1G2-AS1Q8NCQ2 148 aa10.95□□□□□ -0.66
PACS1-201ENST00000320580 IGHV6-1A0A0B4J1U7 121 aa10.94□□□□□ -0.66
PACS1-201ENST00000320580 SPINK6Q6UWN8 80 aa10.94□□□□□ -0.66
PACS1-201ENST00000320580 Q5VV11 94 aa10.93□□□□□ -0.66
PACS1-201ENST00000320580 C16orf90A8MZG2 172 aa10.93□□□□□ -0.66
PACS1-201ENST00000320580 C4orf48Q5BLP8 95 aa10.93□□□□□ -0.66
PACS1-201ENST00000320580 IGLV9-49A0A0B4J1Y8 123 aa10.93□□□□□ -0.66
PACS1-201ENST00000320580 MDFIQ99750 246 aa10.92□□□□□ -0.66
PACS1-201ENST00000320580 KRTAP1-3Q8IUG1 177 aa10.92□□□□□ -0.66
PACS1-201ENST00000320580 C11orf45Q8TAV5 145 aa10.91□□□□□ -0.66
PACS1-201ENST00000320580 Q8N9P0 234 aaPredicted RBP10.91□□□□□ -0.66
PACS1-201ENST00000320580 UBR5O95071 2799 aaPredicted RBP10.9□□□□□ -0.66
PACS1-201ENST00000320580 KCNQ1DNQ9H478 68 aa10.9□□□□□ -0.66
PACS1-201ENST00000320580 CDC42SE1Q9NRR8 79 aa10.9□□□□□ -0.66
PACS1-201ENST00000320580 DSCR10P59022 87 aa10.9□□□□□ -0.67
PACS1-201ENST00000320580 LINC00588Q9Y4M8 146 aa10.89□□□□□ -0.67
PACS1-201ENST00000320580 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
PACS1-201ENST00000320580 SETXQ7Z333 2677 aaKnown RBP10.88□□□□□ -0.67
PACS1-201ENST00000320580 SPENQ96T58 3664 aaKnown RBP10.88□□□□□ -0.67
PACS1-201ENST00000320580 IGLV5-48A0A075B6I7 105 aa10.87□□□□□ -0.67
PACS1-201ENST00000320580 LINC00612Q8N6U2 182 aa10.86□□□□□ -0.67
PACS1-201ENST00000320580 C8orf87E5RJ46 101 aa10.86□□□□□ -0.67
PACS1-201ENST00000320580 FAM168BA1KXE4 195 aa10.86□□□□□ -0.67
PACS1-201ENST00000320580 SPANXA2-OT1Q8N9U9 137 aa10.86□□□□□ -0.67
PACS1-201ENST00000320580 NF1P21359 2839 aa10.85□□□□□ -0.67
PACS1-201ENST00000320580 PRR34Q9NV39 138 aa10.84□□□□□ -0.67
PACS1-201ENST00000320580 NBEAL2Q6ZNJ1 2754 aa10.84□□□□□ -0.67
PACS1-201ENST00000320580 IGFL1Q6UW32 110 aa10.84□□□□□ -0.67
PACS1-201ENST00000320580 COL6A5A8TX70 2615 aa10.84□□□□□ -0.67
PACS1-201ENST00000320580 A0A1B0GU69 56 aa10.82□□□□□ -0.68
PACS1-201ENST00000320580 BSNQ9UPA5 3926 aa10.82□□□□□ -0.68
PACS1-201ENST00000320580 C19orf73Q9NVV2 129 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms