RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 LINC00167Q96N53 147 aa10.41□□□□□ -0.74
SHISA2-201ENST00000319420 M0R2N4 97 aa10.4□□□□□ -0.74
SHISA2-201ENST00000319420 LINC00575Q6W349 94 aa10.4□□□□□ -0.75
SHISA2-201ENST00000319420 PRO0628Q9UI54 55 aa10.4□□□□□ -0.75
SHISA2-201ENST00000319420 ACYP1P07311 99 aa10.39□□□□□ -0.75
SHISA2-201ENST00000319420 TMEM258P61165 79 aa10.39□□□□□ -0.75
SHISA2-201ENST00000319420 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
SHISA2-201ENST00000319420 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
SHISA2-201ENST00000319420 MUC7Q8TAX7 377 aa10.39□□□□□ -0.75
SHISA2-201ENST00000319420 DNAH1Q9P2D7 4330 aa10.38□□□□□ -0.75
SHISA2-201ENST00000319420 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
SHISA2-201ENST00000319420 APLNQ9ULZ1 77 aa10.38□□□□□ -0.75
SHISA2-201ENST00000319420 Q6ZQY7 126 aa10.38□□□□□ -0.75
SHISA2-201ENST00000319420 DIRC1Q969H9 104 aa10.38□□□□□ -0.75
SHISA2-201ENST00000319420 RMI2Q96E14 147 aa10.37□□□□□ -0.75
SHISA2-201ENST00000319420 STARD9Q9P2P6 4700 aa10.37□□□□□ -0.75
SHISA2-201ENST00000319420 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
SHISA2-201ENST00000319420 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
SHISA2-201ENST00000319420 M0R378 163 aa10.35□□□□□ -0.75
SHISA2-201ENST00000319420 LINC00643Q86TS7 51 aa10.35□□□□□ -0.75
SHISA2-201ENST00000319420 LINC00846Q9NV44 126 aa10.35□□□□□ -0.75
SHISA2-201ENST00000319420 LAMTOR3Q9UHA4 124 aa10.35□□□□□ -0.75
SHISA2-201ENST00000319420 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
SHISA2-201ENST00000319420 COX7BP24311 80 aa10.32□□□□□ -0.76
SHISA2-201ENST00000319420 C7orf33Q8WU49 177 aa10.32□□□□□ -0.76
SHISA2-201ENST00000319420 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
SHISA2-201ENST00000319420 FUSP35637 526 aaKnown RBP eCLIP10.32□□□□□ -0.76
SHISA2-201ENST00000319420 ATOX1O00244 68 aa10.32□□□□□ -0.76
SHISA2-201ENST00000319420 HIST1H4AP62805 103 aaKnown RBP10.32□□□□□ -0.76
SHISA2-201ENST00000319420 FAM236DA0A1B0GTK5 79 aa10.3□□□□□ -0.76
SHISA2-201ENST00000319420 FAM236CP0DP71 79 aa10.3□□□□□ -0.76
SHISA2-201ENST00000319420 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
SHISA2-201ENST00000319420 CCKP06307 115 aa10.28□□□□□ -0.76
SHISA2-201ENST00000319420 SRRM2Q9UQ35 2752 aaKnown RBP10.28□□□□□ -0.76
SHISA2-201ENST00000319420 V9GYY9 64 aa10.28□□□□□ -0.76
SHISA2-201ENST00000319420 IGKV3D-7A0A0C4DH55 119 aa10.27□□□□□ -0.77
SHISA2-201ENST00000319420 JMJD7-PLA2G4BH0Y9G9 81 aa10.27□□□□□ -0.77
SHISA2-201ENST00000319420 CHTF8P0CG12 524 aa10.27□□□□□ -0.77
SHISA2-201ENST00000319420 ELOF1P60002 83 aaKnown RBP10.26□□□□□ -0.77
SHISA2-201ENST00000319420 KRTAP7-1Q8IUC3 87 aa10.26□□□□□ -0.77
SHISA2-201ENST00000319420 KMT2AQ03164 3969 aa10.26□□□□□ -0.77
SHISA2-201ENST00000319420 NUPR2A6NF83 97 aa10.26□□□□□ -0.77
SHISA2-201ENST00000319420 A0A096LNI7 61 aa10.25□□□□□ -0.77
SHISA2-201ENST00000319420 A0A0U1RQV1 116 aa10.25□□□□□ -0.77
SHISA2-201ENST00000319420 SERP2Q8N6R1 65 aa10.25□□□□□ -0.77
SHISA2-201ENST00000319420 A0A087WVE0 104 aa10.24□□□□□ -0.77
SHISA2-201ENST00000319420 NBDYA0A0U1RRE5 68 aa10.23□□□□□ -0.77
SHISA2-201ENST00000319420 RBM3P98179 157 aaKnown RBP10.22□□□□□ -0.77
SHISA2-201ENST00000319420 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.77
SHISA2-201ENST00000319420 MRPL55Q7Z7F7 128 aaKnown RBP10.21□□□□□ -0.78
SHISA2-201ENST00000319420 TLX1NBP0CAT3 122 aa10.2□□□□□ -0.78
SHISA2-201ENST00000319420 Q6ZQT0 140 aa10.2□□□□□ -0.78
SHISA2-201ENST00000319420 ETDCA0A1B0GVM5 59 aa10.2□□□□□ -0.78
SHISA2-201ENST00000319420 A0A1W2PNN7 141 aa10.2□□□□□ -0.78
SHISA2-201ENST00000319420 C1orf195Q5TG92 126 aa10.2□□□□□ -0.78
SHISA2-201ENST00000319420 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
SHISA2-201ENST00000319420 DYNC2H1Q8NCM8 4307 aaKnown RBP10.18□□□□□ -0.78
SHISA2-201ENST00000319420 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.18□□□□□ -0.78
SHISA2-201ENST00000319420 ST20-AS1Q8NBB2 130 aa10.17□□□□□ -0.78
SHISA2-201ENST00000319420 IGLV1-50A0A075B6I6 118 aa10.17□□□□□ -0.78
SHISA2-201ENST00000319420 TRBV7-6A0A0J9YX20 115 aa10.17□□□□□ -0.78
SHISA2-201ENST00000319420 UBE2BP63146 152 aa10.17□□□□□ -0.78
SHISA2-201ENST00000319420 Q6JHZ5 121 aa10.17□□□□□ -0.78
SHISA2-201ENST00000319420 PRLHP81277 87 aa10.15□□□□□ -0.79
SHISA2-201ENST00000319420 Q9BRP9 147 aa10.15□□□□□ -0.79
SHISA2-201ENST00000319420 BRK1Q8WUW1 75 aa10.14□□□□□ -0.79
SHISA2-201ENST00000319420 LOC110117498A0A087WWA1 95 aa10.14□□□□□ -0.79
SHISA2-201ENST00000319420 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
SHISA2-201ENST00000319420 FP248Q71RG6 208 aaPredicted RBP10.13□□□□□ -0.79
SHISA2-201ENST00000319420 PHF5AQ7RTV0 110 aaKnown RBP10.13□□□□□ -0.79
SHISA2-201ENST00000319420 C16orf90A8MZG2 172 aa10.12□□□□□ -0.79
SHISA2-201ENST00000319420 Q6ZRX8 168 aa10.12□□□□□ -0.79
SHISA2-201ENST00000319420 LRCOL1A6NCL2 159 aa10.12□□□□□ -0.79
SHISA2-201ENST00000319420 PANO1I0J062 215 aa10.12□□□□□ -0.79
SHISA2-201ENST00000319420 LY6G6CO95867 125 aa10.12□□□□□ -0.79
SHISA2-201ENST00000319420 EPM2AB3EWF7 344 aa10.12□□□□□ -0.79
SHISA2-201ENST00000319420 CNBPP62633 177 aaKnown RBP10.11□□□□□ -0.79
SHISA2-201ENST00000319420 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
SHISA2-201ENST00000319420 PLA2G2DQ9UNK4 145 aa10.11□□□□□ -0.79
SHISA2-201ENST00000319420 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
SHISA2-201ENST00000319420 FAM19A1Q7Z5A9 133 aa10.1□□□□□ -0.79
SHISA2-201ENST00000319420 VPS13DQ5THJ4 4388 aa10.1□□□□□ -0.79
SHISA2-201ENST00000319420 TRBV7-4A0A0J9YYF1 115 aa10.09□□□□□ -0.79
SHISA2-201ENST00000319420 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
SHISA2-201ENST00000319420 C14orf177Q52M58 125 aa10.09□□□□□ -0.79
SHISA2-201ENST00000319420 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
SHISA2-201ENST00000319420 C20orf197Q8N268 126 aa10.09□□□□□ -0.79
SHISA2-201ENST00000319420 UBL5Q9BZL1 73 aa10.09□□□□□ -0.79
SHISA2-201ENST00000319420 KRTAP4-16G5E9R7 235 aaPredicted RBP10.08□□□□□ -0.8
SHISA2-201ENST00000319420 HAMPP81172 84 aa10.08□□□□□ -0.8
SHISA2-201ENST00000319420 Q8N377 158 aa10.08□□□□□ -0.8
SHISA2-201ENST00000319420 DNAH2Q9P225 4427 aa10.08□□□□□ -0.8
SHISA2-201ENST00000319420 PRYO14603 147 aa10.08□□□□□ -0.8
SHISA2-201ENST00000319420 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
SHISA2-201ENST00000319420 SCXQ7RTU7 201 aa10.08□□□□□ -0.8
SHISA2-201ENST00000319420 LINC00474Q9P2X8 69 aa10.08□□□□□ -0.8
SHISA2-201ENST00000319420 IGLV5-37A0A075B6J1 123 aa10.07□□□□□ -0.8
SHISA2-201ENST00000319420 A0A0G2JQZ4 141 aa10.07□□□□□ -0.8
SHISA2-201ENST00000319420 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
SHISA2-201ENST00000319420 H3BQ85 93 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms