RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 PRLHP81277 87 aa5.71□□□□□ -1.5
PDLIM5-201ENST00000317968 FAM104AQ969W3 186 aa5.71□□□□□ -1.5
PDLIM5-201ENST00000317968 LINC00167Q96N53 147 aa5.71□□□□□ -1.5
PDLIM5-201ENST00000317968 TLX1NBP0CAT3 122 aa5.71□□□□□ -1.5
PDLIM5-201ENST00000317968 C6orf48Q9UBA6 75 aa5.71□□□□□ -1.5
PDLIM5-201ENST00000317968 ASH1LQ9NR48 2969 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-201ENST00000317968 SPACA4Q8TDM5 124 aa5.7□□□□□ -1.5
PDLIM5-201ENST00000317968 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-201ENST00000317968 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
PDLIM5-201ENST00000317968 IGHV6-1A0A0B4J1U7 121 aa5.69□□□□□ -1.5
PDLIM5-201ENST00000317968 DMDP11532 3685 aa5.69□□□□□ -1.5
PDLIM5-201ENST00000317968 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
PDLIM5-201ENST00000317968 NOTCH1P46531 2555 aa5.69□□□□□ -1.5
PDLIM5-201ENST00000317968 MOBPQ13875 183 aa5.68□□□□□ -1.5
PDLIM5-201ENST00000317968 DCHS2Q6V1P9 2916 aa5.68□□□□□ -1.5
PDLIM5-201ENST00000317968 WFDC2Q14508 124 aa5.68□□□□□ -1.5
PDLIM5-201ENST00000317968 PLA2G2DQ9UNK4 145 aa5.68□□□□□ -1.5
PDLIM5-201ENST00000317968 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
PDLIM5-201ENST00000317968 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
PDLIM5-201ENST00000317968 NIPBLQ6KC79 2804 aaeCLIP5.67□□□□□ -1.5
PDLIM5-201ENST00000317968 LCE6AA0A183 80 aa5.67□□□□□ -1.5
PDLIM5-201ENST00000317968 LINC00528Q8N1L1 170 aa5.67□□□□□ -1.5
PDLIM5-201ENST00000317968 SOSTDC1Q6X4U4 206 aa5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 CNBPP62633 177 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 Q6Q795 121 aa5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 A0A087WYN8 130 aa5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 WFDC13Q8IUB5 93 aa5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 Q8N3U1 123 aa5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 Q8N9L7 120 aa5.66□□□□□ -1.5
PDLIM5-201ENST00000317968 C15orf56Q8N910 161 aa5.65□□□□□ -1.5
PDLIM5-201ENST00000317968 MXRA5Q9NR99 2828 aa5.65□□□□□ -1.5
PDLIM5-201ENST00000317968 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.5
PDLIM5-201ENST00000317968 CFAP47Q6ZTR5 3102 aa5.65□□□□□ -1.51
PDLIM5-201ENST00000317968 CDIP1Q9H305 208 aa5.64□□□□□ -1.51
PDLIM5-201ENST00000317968 A0A1B0GW54 56 aa5.64□□□□□ -1.51
PDLIM5-201ENST00000317968 C9orf163Q8N9P6 203 aa5.64□□□□□ -1.51
PDLIM5-201ENST00000317968 FAM240AA0A1B0GVK7 77 aa5.64□□□□□ -1.51
PDLIM5-201ENST00000317968 LINC00575Q6W349 94 aa5.64□□□□□ -1.51
PDLIM5-201ENST00000317968 A0A087WSZ3 146 aa5.63□□□□□ -1.51
PDLIM5-201ENST00000317968 CRYBG3Q68DQ2 2970 aa5.63□□□□□ -1.51
PDLIM5-201ENST00000317968 VPREB1P12018 145 aa5.62□□□□□ -1.51
PDLIM5-201ENST00000317968 IGLV6-57P01721 117 aa5.62□□□□□ -1.51
PDLIM5-201ENST00000317968 CHTF8P0CG12 524 aa5.62□□□□□ -1.51
PDLIM5-201ENST00000317968 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
PDLIM5-201ENST00000317968 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
PDLIM5-201ENST00000317968 ZNF861PO60384 105 aa5.61□□□□□ -1.51
PDLIM5-201ENST00000317968 PRR3P79522 188 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-201ENST00000317968 Q6ZRX8 168 aa5.61□□□□□ -1.51
PDLIM5-201ENST00000317968 IGLV5-37A0A075B6J1 123 aa5.61□□□□□ -1.51
PDLIM5-201ENST00000317968 SMR3BP02814 79 aaPredicted RBP5.61□□□□□ -1.51
PDLIM5-201ENST00000317968 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
PDLIM5-201ENST00000317968 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
PDLIM5-201ENST00000317968 ELOF1P60002 83 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-201ENST00000317968 KCNQ1DNQ9H478 68 aa5.59□□□□□ -1.51
PDLIM5-201ENST00000317968 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.51
PDLIM5-201ENST00000317968 C3orf22Q8N5N4 141 aa5.58□□□□□ -1.52
PDLIM5-201ENST00000317968 IGLV7-43P04211 117 aa5.58□□□□□ -1.52
PDLIM5-201ENST00000317968 LINC00313P59037 77 aa5.58□□□□□ -1.52
PDLIM5-201ENST00000317968 NF1P21359 2839 aa5.58□□□□□ -1.52
PDLIM5-201ENST00000317968 WDFY3Q8IZQ1 3526 aa5.58□□□□□ -1.52
PDLIM5-201ENST00000317968 IGLV1-50A0A075B6I6 118 aa5.58□□□□□ -1.52
PDLIM5-201ENST00000317968 OTOGQ6ZRI0 2925 aa5.58□□□□□ -1.52
PDLIM5-201ENST00000317968 ZFHX4Q86UP3 3567 aa5.57□□□□□ -1.52
PDLIM5-201ENST00000317968 KRTAP26-1Q6PEX3 210 aa5.57□□□□□ -1.52
PDLIM5-201ENST00000317968 FAM236AA0A1B0GUQ0 79 aa5.57□□□□□ -1.52
PDLIM5-201ENST00000317968 FAM236BA0A1B0GV22 79 aa5.57□□□□□ -1.52
PDLIM5-201ENST00000317968 LINC01600Q96MT4 127 aa5.57□□□□□ -1.52
PDLIM5-201ENST00000317968 NDUFC1O43677 76 aa5.56□□□□□ -1.52
PDLIM5-201ENST00000317968 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
PDLIM5-201ENST00000317968 TNP2Q05952 138 aa5.56□□□□□ -1.52
PDLIM5-201ENST00000317968 IMUPQ9GZP8 106 aa5.56□□□□□ -1.52
PDLIM5-201ENST00000317968 PRO0461Q9UI25 63 aa5.56□□□□□ -1.52
PDLIM5-201ENST00000317968 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
PDLIM5-201ENST00000317968 hDV103S1A0JD37 113 aa5.54□□□□□ -1.52
PDLIM5-201ENST00000317968 RETNLBQ9BQ08 111 aa5.54□□□□□ -1.52
PDLIM5-201ENST00000317968 LAMA5O15230 3695 aa5.53□□□□□ -1.52
PDLIM5-201ENST00000317968 V9GYY9 64 aa5.53□□□□□ -1.52
PDLIM5-201ENST00000317968 SDIM1Q6ZPB5 146 aa5.53□□□□□ -1.52
PDLIM5-201ENST00000317968 Q96NJ1 140 aa5.53□□□□□ -1.52
PDLIM5-201ENST00000317968 C20orf197Q8N268 126 aa5.53□□□□□ -1.52
PDLIM5-201ENST00000317968 HCG22E2RYF7 251 aa5.52□□□□□ -1.53
PDLIM5-201ENST00000317968 SPINK1P00995 79 aa5.52□□□□□ -1.53
PDLIM5-201ENST00000317968 C9orf129Q5T035 196 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-201ENST00000317968 EIF4EBP3O60516 100 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-201ENST00000317968 LINC01547P58512 204 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-201ENST00000317968 RBM12B-AS1Q9P1G2 102 aa5.51□□□□□ -1.53
PDLIM5-201ENST00000317968 ST20-AS1Q8NBB2 130 aa5.51□□□□□ -1.53
PDLIM5-201ENST00000317968 RELNP78509 3460 aa5.51□□□□□ -1.53
PDLIM5-201ENST00000317968 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
PDLIM5-201ENST00000317968 IGKV2-30P06310 120 aa5.5□□□□□ -1.53
PDLIM5-201ENST00000317968 NBEAL2Q6ZNJ1 2754 aa5.5□□□□□ -1.53
PDLIM5-201ENST00000317968 BSNQ9UPA5 3926 aa5.5□□□□□ -1.53
PDLIM5-201ENST00000317968 LOC110117498A0A087WWA1 95 aa5.5□□□□□ -1.53
PDLIM5-201ENST00000317968 UQCRQO14949 82 aa5.5□□□□□ -1.53
PDLIM5-201ENST00000317968 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
PDLIM5-201ENST00000317968 SERTAD4-AS1Q5TG53 156 aa5.49□□□□□ -1.53
PDLIM5-201ENST00000317968 FAM218AQ96MZ4 157 aa5.49□□□□□ -1.53
PDLIM5-201ENST00000317968 SMCPP49901 116 aaPredicted RBP5.49□□□□□ -1.53
PDLIM5-201ENST00000317968 Q6ZR54 194 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms