RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
CXCL3-201ENST00000296026 FABP4P15090 132 aa10.93□□□□□ -0.66
CXCL3-201ENST00000296026 JOSD1Q15040 202 aaPredicted RBP10.93□□□□□ -0.66
CXCL3-201ENST00000296026 KRTAP9-6A0A140TA67 174 aa10.92□□□□□ -0.66
CXCL3-201ENST00000296026 IGKCP01834 107 aa10.92□□□□□ -0.66
CXCL3-201ENST00000296026 LINC01547P58512 204 aaPredicted RBP10.91□□□□□ -0.66
CXCL3-201ENST00000296026 NPC2P61916 151 aa10.91□□□□□ -0.66
CXCL3-201ENST00000296026 C9orf153Q5TBE3 101 aa10.91□□□□□ -0.66
CXCL3-201ENST00000296026 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
CXCL3-201ENST00000296026 ZNF73O43830 326 aaPredicted RBP10.9□□□□□ -0.66
CXCL3-201ENST00000296026 EIF4EBP3O60516 100 aaPredicted RBP10.9□□□□□ -0.66
CXCL3-201ENST00000296026 LCE2BO14633 110 aa10.89□□□□□ -0.67
CXCL3-201ENST00000296026 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
CXCL3-201ENST00000296026 A0A0J9YXY3 114 aa10.88□□□□□ -0.67
CXCL3-201ENST00000296026 ST20-AS1Q8NBB2 130 aa10.88□□□□□ -0.67
CXCL3-201ENST00000296026 XP32Q5T750 250 aa10.86□□□□□ -0.67
CXCL3-201ENST00000296026 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
CXCL3-201ENST00000296026 C5orf52A6NGY3 159 aa10.83□□□□□ -0.68
CXCL3-201ENST00000296026 E9PLD3 99 aa10.83□□□□□ -0.68
CXCL3-201ENST00000296026 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
CXCL3-201ENST00000296026 OR13C6PQ8NH95 151 aa10.8□□□□□ -0.68
CXCL3-201ENST00000296026 LINC00308Q8TCZ7 52 aa10.79□□□□□ -0.68
CXCL3-201ENST00000296026 LITAFQ99732 161 aa10.79□□□□□ -0.68
CXCL3-201ENST00000296026 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
CXCL3-201ENST00000296026 SPRR1BP22528 89 aa10.78□□□□□ -0.68
CXCL3-201ENST00000296026 COLCA2A8K830 154 aa10.77□□□□□ -0.69
CXCL3-201ENST00000296026 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.69
CXCL3-201ENST00000296026 HRCT1Q6UXD1 115 aa10.77□□□□□ -0.69
CXCL3-201ENST00000296026 LIMD2Q9BT23 127 aa10.76□□□□□ -0.69
CXCL3-201ENST00000296026 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
CXCL3-201ENST00000296026 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
CXCL3-201ENST00000296026 TIMM17BO60830 172 aa10.74□□□□□ -0.69
CXCL3-201ENST00000296026 LAMTOR3Q9UHA4 124 aa10.74□□□□□ -0.69
CXCL3-201ENST00000296026 SPANXDQ9BXN6 97 aa10.73□□□□□ -0.69
CXCL3-201ENST00000296026 ELOF1P60002 83 aaKnown RBP10.71□□□□□ -0.69
CXCL3-201ENST00000296026 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
CXCL3-201ENST00000296026 C9orf92A6NGG3 77 aa10.7□□□□□ -0.7
CXCL3-201ENST00000296026 ZNF815PA8K554 130 aa10.7□□□□□ -0.7
CXCL3-201ENST00000296026 COX7BP24311 80 aa10.7□□□□□ -0.7
CXCL3-201ENST00000296026 C6orf99Q4VX62 202 aa10.7□□□□□ -0.7
CXCL3-201ENST00000296026 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
CXCL3-201ENST00000296026 PCOTHQ58A44 107 aa10.69□□□□□ -0.7
CXCL3-201ENST00000296026 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
CXCL3-201ENST00000296026 TAL2Q16559 108 aa10.68□□□□□ -0.7
CXCL3-201ENST00000296026 Q1RN00 199 aa10.68□□□□□ -0.7
CXCL3-201ENST00000296026 LINC00518Q8N0U6 118 aa10.68□□□□□ -0.7
CXCL3-201ENST00000296026 TTTY13Q9BZ97 58 aa10.68□□□□□ -0.7
CXCL3-201ENST00000296026 PET117Q6UWS5 81 aa10.67□□□□□ -0.7
CXCL3-201ENST00000296026 DEFB105AQ8NG35 78 aa10.67□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BKO60814 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BJP06899 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BOP23527 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BBP33778 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BDP58876 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BCP62807 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST2H2BEQ16778 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 KRTAP19-2Q3LHN2 52 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BHQ93079 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BNQ99877 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 HIST1H2BMQ99879 126 aa10.66□□□□□ -0.7
CXCL3-201ENST00000296026 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.7
CXCL3-201ENST00000296026 CD164Q04900 197 aa10.65□□□□□ -0.7
CXCL3-201ENST00000296026 PRO1933Q9H354 126 aa10.65□□□□□ -0.7
CXCL3-201ENST00000296026 TEX49A0A1B0GTD5 131 aa10.63□□□□□ -0.71
CXCL3-201ENST00000296026 H7C2G1 150 aa10.62□□□□□ -0.71
CXCL3-201ENST00000296026 TRBV7-6A0A0J9YX20 115 aa10.61□□□□□ -0.71
CXCL3-201ENST00000296026 C3orf79P0CE67 100 aa10.6□□□□□ -0.71
CXCL3-201ENST00000296026 MT1HP80294 61 aa10.6□□□□□ -0.71
CXCL3-201ENST00000296026 SCGB1D4Q6XE38 83 aa10.6□□□□□ -0.71
CXCL3-201ENST00000296026 AKR1D1P51857 326 aa10.59□□□□□ -0.71
CXCL3-201ENST00000296026 SMIM29Q86T20 159 aa10.59□□□□□ -0.71
CXCL3-201ENST00000296026 A0A1B0GWB2 263 aa10.57□□□□□ -0.72
CXCL3-201ENST00000296026 Q5XG85 94 aa10.57□□□□□ -0.72
CXCL3-201ENST00000296026 IGLV5-48A0A075B6I7 105 aa10.56□□□□□ -0.72
CXCL3-201ENST00000296026 A0A0G2JQZ4 141 aa10.56□□□□□ -0.72
CXCL3-201ENST00000296026 A6NDN8 102 aa10.56□□□□□ -0.72
CXCL3-201ENST00000296026 C1orf195Q5TG92 126 aa10.56□□□□□ -0.72
CXCL3-201ENST00000296026 CRCT1Q9UGL9 99 aa10.56□□□□□ -0.72
CXCL3-201ENST00000296026 KRTDAPP60985 99 aa10.55□□□□□ -0.72
CXCL3-201ENST00000296026 COPS9Q8WXC6 57 aa10.55□□□□□ -0.72
CXCL3-201ENST00000296026 IFITM1P13164 125 aa10.54□□□□□ -0.72
CXCL3-201ENST00000296026 CFC1BP0CG36 223 aa10.53□□□□□ -0.72
CXCL3-201ENST00000296026 ANKRD39Q53RE8 183 aa10.53□□□□□ -0.72
CXCL3-201ENST00000296026 Q6ZVH6 145 aa10.51□□□□□ -0.73
CXCL3-201ENST00000296026 MUSTN1Q8IVN3 82 aa10.51□□□□□ -0.73
CXCL3-201ENST00000296026 A4D1N5 150 aa10.5□□□□□ -0.73
CXCL3-201ENST00000296026 C20orf202A1L168 122 aa10.49□□□□□ -0.73
CXCL3-201ENST00000296026 RPL37P61927 97 aaKnown RBP10.48□□□□□ -0.73
CXCL3-201ENST00000296026 COA6Q5JTJ3 125 aaKnown RBP10.48□□□□□ -0.73
CXCL3-201ENST00000296026 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
CXCL3-201ENST00000296026 NHP2Q9NX24 153 aaKnown RBP10.48□□□□□ -0.73
CXCL3-201ENST00000296026 PCP2Q8IVA1 136 aa10.47□□□□□ -0.73
CXCL3-201ENST00000296026 SMIM11BQ8TCY0 68 aa10.47□□□□□ -0.73
CXCL3-201ENST00000296026 TRAV13-2A0A0B4J235 113 aa10.45□□□□□ -0.74
CXCL3-201ENST00000296026 FSIP2Q5CZC0 6907 aa10.44□□□□□ -0.74
CXCL3-201ENST00000296026 TCL1BO95988 128 aa10.44□□□□□ -0.74
CXCL3-201ENST00000296026 LORP23490 312 aaPredicted RBP10.44□□□□□ -0.74
CXCL3-201ENST00000296026 KRTAP10-6P60371 365 aaPredicted RBP10.43□□□□□ -0.74
CXCL3-201ENST00000296026 F8WEM9 126 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 517.8 ms