RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 TNXBP22105 4242 aa16.15■□□□□ 0.18
SSU72-201ENST00000291386 SPATA45Q537H7 98 aa16.14■□□□□ 0.17
SSU72-201ENST00000291386 PYY3Q5JQD4 70 aa16.14■□□□□ 0.17
SSU72-201ENST00000291386 PAM16Q9Y3D7 125 aa16.14■□□□□ 0.17
SSU72-201ENST00000291386 CBY1Q9Y3M2 126 aa16.14■□□□□ 0.17
SSU72-201ENST00000291386 TRAV23DV6A0A075B6W5 121 aa16.12■□□□□ 0.17
SSU72-201ENST00000291386 ETDCA0A1B0GVM5 59 aa16.11■□□□□ 0.17
SSU72-201ENST00000291386 HERC1Q15751 4861 aa16.11■□□□□ 0.17
SSU72-201ENST00000291386 B5MCH6 92 aa16.08■□□□□ 0.16
SSU72-201ENST00000291386 OR13C6PQ8NH95 151 aa16.08■□□□□ 0.16
SSU72-201ENST00000291386 C14orf144Q96I85 54 aa16.08■□□□□ 0.16
SSU72-201ENST00000291386 ZNF73O43830 326 aaPredicted RBP16.07■□□□□ 0.16
SSU72-201ENST00000291386 HIGD2AQ9BW72 106 aa16.06■□□□□ 0.16
SSU72-201ENST00000291386 PRR26Q8N8Z3 221 aa16.05■□□□□ 0.16
SSU72-201ENST00000291386 SLC25A34Q6PIV7 304 aa16.04■□□□□ 0.16
SSU72-201ENST00000291386 Q6ZRX8 168 aa16.03■□□□□ 0.16
SSU72-201ENST00000291386 HIGD1BQ9P298 99 aa16.03■□□□□ 0.16
SSU72-201ENST00000291386 SMCR5Q8TEV8 140 aa16.02■□□□□ 0.16
SSU72-201ENST00000291386 RPL13AP40429 203 aaKnown RBP16.01■□□□□ 0.15
SSU72-201ENST00000291386 TRAV13-2A0A0B4J235 113 aa15.99■□□□□ 0.15
SSU72-201ENST00000291386 FAM229BQ4G0N7 80 aa15.99■□□□□ 0.15
SSU72-201ENST00000291386 HIST1H4GQ99525 98 aa15.99■□□□□ 0.15
SSU72-201ENST00000291386 HINT1P49773 126 aaPredicted RBP15.98■□□□□ 0.15
SSU72-201ENST00000291386 A4D1N5 150 aa15.97■□□□□ 0.15
SSU72-201ENST00000291386 C2orf91Q6ZV80 131 aa15.97■□□□□ 0.15
SSU72-201ENST00000291386 Q9BRP9 147 aa15.97■□□□□ 0.15
SSU72-201ENST00000291386 A6NDN8 102 aa15.96■□□□□ 0.15
SSU72-201ENST00000291386 CRYGAP11844 174 aa15.96■□□□□ 0.15
SSU72-201ENST00000291386 ZNF706Q9Y5V0 76 aaPredicted RBP15.96■□□□□ 0.15
SSU72-201ENST00000291386 A0A087X002 238 aa15.95■□□□□ 0.14
SSU72-201ENST00000291386 SPRR4Q96PI1 79 aa15.95■□□□□ 0.14
SSU72-201ENST00000291386 ANAPC11Q9NYG5 84 aa15.93■□□□□ 0.14
SSU72-201ENST00000291386 C6orf99Q4VX62 202 aa15.92■□□□□ 0.14
SSU72-201ENST00000291386 TRBV7-6A0A0J9YX20 115 aa15.91■□□□□ 0.14
SSU72-201ENST00000291386 ERC2-IT1O76042 136 aa15.9■□□□□ 0.14
SSU72-201ENST00000291386 ELOF1P60002 83 aaKnown RBP15.9■□□□□ 0.14
SSU72-201ENST00000291386 TAL2Q16559 108 aa15.9■□□□□ 0.14
SSU72-201ENST00000291386 COX7BP24311 80 aa15.88■□□□□ 0.13
SSU72-201ENST00000291386 KRTAP13-2Q52LG2 175 aa15.87■□□□□ 0.13
SSU72-201ENST00000291386 DHRS4-AS1Q9P1J3 65 aa15.86■□□□□ 0.13
SSU72-201ENST00000291386 LINC00483Q53H64 154 aa15.85■□□□□ 0.13
SSU72-201ENST00000291386 SMIM11BQ8TCY0 68 aa15.85■□□□□ 0.13
SSU72-201ENST00000291386 TYMSOSQ8TAI1 123 aa15.84■□□□□ 0.13
SSU72-201ENST00000291386 A0A1B0GWB2 263 aa15.83■□□□□ 0.12
SSU72-201ENST00000291386 CEND1Q8N111 149 aa15.82■□□□□ 0.12
SSU72-201ENST00000291386 UQCR10Q9UDW1 63 aa15.81■□□□□ 0.12
SSU72-201ENST00000291386 C12orf57Q99622 126 aa15.8■□□□□ 0.12
SSU72-201ENST00000291386 CFC1BP0CG36 223 aa15.79■□□□□ 0.12
SSU72-201ENST00000291386 CFC1P0CG37 223 aa15.79■□□□□ 0.12
SSU72-201ENST00000291386 GAGE2AQ6NT46 116 aa15.79■□□□□ 0.12
SSU72-201ENST00000291386 A0A0B4J2C4 111 aa15.76■□□□□ 0.11
SSU72-201ENST00000291386 SMIM6P0DI80 62 aa15.76■□□□□ 0.11
SSU72-201ENST00000291386 C3orf22Q8N5N4 141 aa15.75■□□□□ 0.11
SSU72-201ENST00000291386 TMEM238LA0A1B0GVL6 79 aa15.74■□□□□ 0.11
SSU72-201ENST00000291386 A6NJY4 79 aa15.74■□□□□ 0.11
SSU72-201ENST00000291386 HSD52Q0P140 79 aa15.74■□□□□ 0.11
SSU72-201ENST00000291386 ST20-AS1Q8NBB2 130 aa15.74■□□□□ 0.11
SSU72-201ENST00000291386 VAMP3Q15836 100 aa15.73■□□□□ 0.11
SSU72-201ENST00000291386 RAB37Q96AX2 223 aa15.73■□□□□ 0.11
SSU72-201ENST00000291386 HMCN2Q8NDA2 5059 aa15.73■□□□□ 0.11
SSU72-201ENST00000291386 SPRR1BP22528 89 aa15.72■□□□□ 0.11
SSU72-201ENST00000291386 FXYD2P54710 66 aa15.71■□□□□ 0.11
SSU72-201ENST00000291386 LOC105371267A0A1B0GV96 52 aa15.7■□□□□ 0.1
SSU72-201ENST00000291386 NHP2Q9NX24 153 aaKnown RBP15.7■□□□□ 0.1
SSU72-201ENST00000291386 LINC00304Q8N9R0 145 aa15.67■□□□□ 0.1
SSU72-201ENST00000291386 CTAG1AP78358 180 aa15.66■□□□□ 0.1
SSU72-201ENST00000291386 BVES-AS1Q5T3Y7 98 aa15.66■□□□□ 0.1
SSU72-201ENST00000291386 LINC00575Q6W349 94 aa15.65■□□□□ 0.1
SSU72-201ENST00000291386 PRO1854Q9UHT4 67 aa15.64■□□□□ 0.09
SSU72-201ENST00000291386 SLC25A20O43772 301 aa15.63■□□□□ 0.09
SSU72-201ENST00000291386 H7C2G1 150 aa15.62■□□□□ 0.09
SSU72-201ENST00000291386 SSBP3-AS1Q7Z2R9 100 aa15.62■□□□□ 0.09
SSU72-201ENST00000291386 PRO1933Q9H354 126 aa15.62■□□□□ 0.09
SSU72-201ENST00000291386 IGLV5-48A0A075B6I7 105 aa15.61■□□□□ 0.09
SSU72-201ENST00000291386 IGLV9-49A0A0B4J1Y8 123 aa15.6■□□□□ 0.09
SSU72-201ENST00000291386 TEX49A0A1B0GTD5 131 aa15.6■□□□□ 0.09
SSU72-201ENST00000291386 LINC01547P58512 204 aaPredicted RBP15.6■□□□□ 0.09
SSU72-201ENST00000291386 SPAG11AQ6PDA7 123 aa15.6■□□□□ 0.09
SSU72-201ENST00000291386 MOBPQ13875 183 aa15.59■□□□□ 0.09
SSU72-201ENST00000291386 Q8NBF4 154 aa15.58■□□□□ 0.08
SSU72-201ENST00000291386 hADV29S1A0JD25 119 aa15.57■□□□□ 0.08
SSU72-201ENST00000291386 TSPAN13O95857 204 aa15.57■□□□□ 0.08
SSU72-201ENST00000291386 DEFB105AQ8NG35 78 aa15.56■□□□□ 0.08
SSU72-201ENST00000291386 LAMTOR3Q9UHA4 124 aa15.56■□□□□ 0.08
SSU72-201ENST00000291386 H0YGX0 51 aa15.55■□□□□ 0.08
SSU72-201ENST00000291386 Q1RN00 199 aa15.55■□□□□ 0.08
SSU72-201ENST00000291386 C9orf153Q5TBE3 101 aa15.52■□□□□ 0.08
SSU72-201ENST00000291386 SMIM29Q86T20 159 aa15.52■□□□□ 0.08
SSU72-201ENST00000291386 C4orf48Q5BLP8 95 aa15.51■□□□□ 0.07
SSU72-201ENST00000291386 Q8N377 158 aa15.51■□□□□ 0.07
SSU72-201ENST00000291386 Q6ZQY7 126 aa15.5■□□□□ 0.07
SSU72-201ENST00000291386 K7ERJ3 54 aa15.49■□□□□ 0.07
SSU72-201ENST00000291386 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.49■□□□□ 0.07
SSU72-201ENST00000291386 SPINK1P00995 79 aa15.47■□□□□ 0.07
SSU72-201ENST00000291386 TSTD3H0UI37 97 aa15.45■□□□□ 0.06
SSU72-201ENST00000291386 TRIAP1O43715 76 aa15.45■□□□□ 0.06
SSU72-201ENST00000291386 A0A1B0GX51 115 aa15.44■□□□□ 0.06
SSU72-201ENST00000291386 RPS29P62273 56 aaKnown RBP15.44■□□□□ 0.06
SSU72-201ENST00000291386 SNCGO76070 127 aa15.43■□□□□ 0.06
SSU72-201ENST00000291386 PPDPFLQ8WWR9 84 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms