RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 COA5Q86WW8 74 aa9.8□□□□□ -0.84
SEC16A-202ENST00000290037 C9orf163Q8N9P6 203 aa9.79□□□□□ -0.84
SEC16A-202ENST00000290037 FAM104AQ969W3 186 aa9.79□□□□□ -0.84
SEC16A-202ENST00000290037 C8orf17Q9NRJ1 99 aa9.78□□□□□ -0.84
SEC16A-202ENST00000290037 SPINK1P00995 79 aa9.78□□□□□ -0.84
SEC16A-202ENST00000290037 SMR3AQ99954 134 aa9.78□□□□□ -0.84
SEC16A-202ENST00000290037 SPRR4Q96PI1 79 aa9.76□□□□□ -0.85
SEC16A-202ENST00000290037 H7BZZ5 65 aa9.75□□□□□ -0.85
SEC16A-202ENST00000290037 IGFL1Q6UW32 110 aa9.75□□□□□ -0.85
SEC16A-202ENST00000290037 Q1T7F1 81 aa9.75□□□□□ -0.85
SEC16A-202ENST00000290037 K7EQZ3 153 aa9.74□□□□□ -0.85
SEC16A-202ENST00000290037 SPACA4Q8TDM5 124 aa9.74□□□□□ -0.85
SEC16A-202ENST00000290037 FAM229BQ4G0N7 80 aa9.74□□□□□ -0.85
SEC16A-202ENST00000290037 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
SEC16A-202ENST00000290037 HELZ2Q9BYK8 2649 aaKnown RBP9.71□□□□□ -0.85
SEC16A-202ENST00000290037 PHF5AQ7RTV0 110 aaKnown RBP9.71□□□□□ -0.86
SEC16A-202ENST00000290037 Q8N377 158 aa9.71□□□□□ -0.86
SEC16A-202ENST00000290037 KTN1-AS1Q86SY8 53 aa9.71□□□□□ -0.86
SEC16A-202ENST00000290037 LINC00304Q8N9R0 145 aa9.71□□□□□ -0.86
SEC16A-202ENST00000290037 ITPR3Q14573 2671 aa9.69□□□□□ -0.86
SEC16A-202ENST00000290037 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
SEC16A-202ENST00000290037 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
SEC16A-202ENST00000290037 GIG44P09565 113 aaPredicted RBP9.67□□□□□ -0.86
SEC16A-202ENST00000290037 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
SEC16A-202ENST00000290037 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
SEC16A-202ENST00000290037 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
SEC16A-202ENST00000290037 CRIPTQ9P021 101 aa9.65□□□□□ -0.86
SEC16A-202ENST00000290037 C9orf129Q5T035 196 aaKnown RBP9.64□□□□□ -0.87
SEC16A-202ENST00000290037 Q96NJ1 140 aa9.64□□□□□ -0.87
SEC16A-202ENST00000290037 ATRQ13535 2644 aa9.64□□□□□ -0.87
SEC16A-202ENST00000290037 ZNF575Q86XF7 245 aa9.63□□□□□ -0.87
SEC16A-202ENST00000290037 MAST4O15021 2626 aa9.63□□□□□ -0.87
SEC16A-202ENST00000290037 FLG2Q5D862 2391 aaPredicted RBP9.61□□□□□ -0.87
SEC16A-202ENST00000290037 IGLV7-43P04211 117 aa9.61□□□□□ -0.87
SEC16A-202ENST00000290037 A0A087WTM6 91 aa9.61□□□□□ -0.87
SEC16A-202ENST00000290037 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
SEC16A-202ENST00000290037 LCA10Q71F78 164 aa9.6□□□□□ -0.87
SEC16A-202ENST00000290037 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
SEC16A-202ENST00000290037 FLNBO75369 2602 aaKnown RBP9.58□□□□□ -0.88
SEC16A-202ENST00000290037 Q9UF83 564 aa9.58□□□□□ -0.88
SEC16A-202ENST00000290037 IGLV8-61A0A075B6I0 122 aa9.58□□□□□ -0.88
SEC16A-202ENST00000290037 ASB16-AS1Q495Z4 193 aa9.57□□□□□ -0.88
SEC16A-202ENST00000290037 CFAP46Q8IYW2 2715 aa9.56□□□□□ -0.88
SEC16A-202ENST00000290037 BPTFQ12830 3046 aa9.56□□□□□ -0.88
SEC16A-202ENST00000290037 IGLV7-46A0A075B6I9 117 aa9.55□□□□□ -0.88
SEC16A-202ENST00000290037 Q75L30 129 aa9.54□□□□□ -0.88
SEC16A-202ENST00000290037 MGAM2Q2M2H8 2515 aa9.54□□□□□ -0.88
SEC16A-202ENST00000290037 CENPFP49454 3210 aa9.54□□□□□ -0.88
SEC16A-202ENST00000290037 K7EIL1 84 aa9.53□□□□□ -0.88
SEC16A-202ENST00000290037 TNP2Q05952 138 aa9.52□□□□□ -0.88
SEC16A-202ENST00000290037 PSORS1C2Q9UIG4 136 aa9.52□□□□□ -0.88
SEC16A-202ENST00000290037 SPRR1BP22528 89 aa9.52□□□□□ -0.89
SEC16A-202ENST00000290037 FAM168BA1KXE4 195 aa9.5□□□□□ -0.89
SEC16A-202ENST00000290037 APLNQ9ULZ1 77 aa9.49□□□□□ -0.89
SEC16A-202ENST00000290037 SPRR1AP35321 89 aa9.49□□□□□ -0.89
SEC16A-202ENST00000290037 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
SEC16A-202ENST00000290037 KRTAP10-11P60412 298 aa9.46□□□□□ -0.9
SEC16A-202ENST00000290037 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
SEC16A-202ENST00000290037 SPINT4Q6UDR6 99 aa9.44□□□□□ -0.9
SEC16A-202ENST00000290037 CENPEQ02224 2701 aa9.42□□□□□ -0.9
SEC16A-202ENST00000290037 ZNF292O60281 2723 aa9.42□□□□□ -0.9
SEC16A-202ENST00000290037 NBEAL1Q6ZS30 2694 aa9.41□□□□□ -0.9
SEC16A-202ENST00000290037 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
SEC16A-202ENST00000290037 HECTD1Q9ULT8 2610 aa9.38□□□□□ -0.91
SEC16A-202ENST00000290037 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
SEC16A-202ENST00000290037 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
SEC16A-202ENST00000290037 STAB1Q9NY15 2570 aa9.37□□□□□ -0.91
SEC16A-202ENST00000290037 LINC01558Q9Y6Z2 57 aa9.36□□□□□ -0.91
SEC16A-202ENST00000290037 AKAP13Q12802 2813 aa9.36□□□□□ -0.91
SEC16A-202ENST00000290037 DSCR10P59022 87 aa9.36□□□□□ -0.91
SEC16A-202ENST00000290037 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
SEC16A-202ENST00000290037 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
SEC16A-202ENST00000290037 J3QL48 77 aa9.32□□□□□ -0.92
SEC16A-202ENST00000290037 HRES1P13985 223 aa9.31□□□□□ -0.92
SEC16A-202ENST00000290037 LUZP6Q538Z0 58 aa9.31□□□□□ -0.92
SEC16A-202ENST00000290037 A0A1W2PNN7 141 aa9.29□□□□□ -0.92
SEC16A-202ENST00000290037 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.93
SEC16A-202ENST00000290037 LINC00483Q53H64 154 aa9.27□□□□□ -0.93
SEC16A-202ENST00000290037 TRANK1O15050 2925 aa9.26□□□□□ -0.93
SEC16A-202ENST00000290037 RPS29P62273 56 aaKnown RBP9.26□□□□□ -0.93
SEC16A-202ENST00000290037 COX6B2Q6YFQ2 88 aa9.26□□□□□ -0.93
SEC16A-202ENST00000290037 TEP1Q99973 2627 aaKnown RBP9.25□□□□□ -0.93
SEC16A-202ENST00000290037 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
SEC16A-202ENST00000290037 LINC00472Q9H8W2 130 aa9.24□□□□□ -0.93
SEC16A-202ENST00000290037 A0A087X002 238 aa9.24□□□□□ -0.93
SEC16A-202ENST00000290037 A0A1B0GU33 70 aa9.24□□□□□ -0.93
SEC16A-202ENST00000290037 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
SEC16A-202ENST00000290037 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.93
SEC16A-202ENST00000290037 FP248Q71RG6 208 aaPredicted RBP9.21□□□□□ -0.94
SEC16A-202ENST00000290037 UNC79Q9P2D8 2635 aa9.2□□□□□ -0.94
SEC16A-202ENST00000290037 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
SEC16A-202ENST00000290037 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
SEC16A-202ENST00000290037 Q6ZR54 194 aa9.18□□□□□ -0.94
SEC16A-202ENST00000290037 NSD1Q96L73 2696 aaPredicted RBP9.17□□□□□ -0.94
SEC16A-202ENST00000290037 CHD6Q8TD26 2715 aa9.17□□□□□ -0.94
SEC16A-202ENST00000290037 TEX15Q9BXT5 2789 aa9.15□□□□□ -0.94
SEC16A-202ENST00000290037 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
SEC16A-202ENST00000290037 Q6ZSA8 131 aa9.12□□□□□ -0.95
SEC16A-202ENST00000290037 Q5XG85 94 aa9.1□□□□□ -0.95
SEC16A-202ENST00000290037 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms