RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 OR13C6PQ8NH95 151 aa14.84□□□□□ -0.03
PDF-201ENST00000288022 SPANXDQ9BXN6 97 aa14.84□□□□□ -0.03
PDF-201ENST00000288022 B5MCH6 92 aa14.83□□□□□ -0.04
PDF-201ENST00000288022 SMCR5Q8TEV8 140 aa14.83□□□□□ -0.04
PDF-201ENST00000288022 ZNF706Q9Y5V0 76 aaPredicted RBP14.83□□□□□ -0.04
PDF-201ENST00000288022 SCGB1D1O95968 90 aa14.82□□□□□ -0.04
PDF-201ENST00000288022 KRTAP13-2Q52LG2 175 aa14.82□□□□□ -0.04
PDF-201ENST00000288022 COPS9Q8WXC6 57 aa14.81□□□□□ -0.04
PDF-201ENST00000288022 SPRR4Q96PI1 79 aa14.81□□□□□ -0.04
PDF-201ENST00000288022 CBY1Q9Y3M2 126 aa14.81□□□□□ -0.04
PDF-201ENST00000288022 ZNF73O43830 326 aaPredicted RBP14.79□□□□□ -0.04
PDF-201ENST00000288022 Q6ZRX8 168 aa14.78□□□□□ -0.04
PDF-201ENST00000288022 LINC00518Q8N0U6 118 aa14.78□□□□□ -0.04
PDF-201ENST00000288022 IFITM1P13164 125 aa14.77□□□□□ -0.05
PDF-201ENST00000288022 Q6ZVH6 145 aa14.77□□□□□ -0.05
PDF-201ENST00000288022 TSPAN13O95857 204 aa14.75□□□□□ -0.05
PDF-201ENST00000288022 JOSD1Q15040 202 aaPredicted RBP14.75□□□□□ -0.05
PDF-201ENST00000288022 HINT1P49773 126 aaPredicted RBP14.74□□□□□ -0.05
PDF-201ENST00000288022 MUSTN1Q8IVN3 82 aa14.74□□□□□ -0.05
PDF-201ENST00000288022 Q9BRP9 147 aa14.74□□□□□ -0.05
PDF-201ENST00000288022 PPDPFQ9H3Y8 114 aa14.74□□□□□ -0.05
PDF-201ENST00000288022 ERC2-IT1O76042 136 aa14.73□□□□□ -0.05
PDF-201ENST00000288022 C3orf22Q8N5N4 141 aa14.72□□□□□ -0.05
PDF-201ENST00000288022 GAGE2AQ6NT46 116 aa14.7□□□□□ -0.06
PDF-201ENST00000288022 LINC00304Q8N9R0 145 aa14.7□□□□□ -0.06
PDF-201ENST00000288022 A6NDN8 102 aa14.67□□□□□ -0.06
PDF-201ENST00000288022 PRR4Q16378 134 aa14.64□□□□□ -0.07
PDF-201ENST00000288022 C6orf99Q4VX62 202 aa14.64□□□□□ -0.07
PDF-201ENST00000288022 LINC00483Q53H64 154 aa14.64□□□□□ -0.07
PDF-201ENST00000288022 COX7BP24311 80 aa14.62□□□□□ -0.07
PDF-201ENST00000288022 COX8AP10176 69 aa14.6□□□□□ -0.07
PDF-201ENST00000288022 DHRS4-AS1Q9P1J3 65 aa14.6□□□□□ -0.07
PDF-201ENST00000288022 TRAV13-2A0A0B4J235 113 aa14.59□□□□□ -0.07
PDF-201ENST00000288022 ELOF1P60002 83 aaKnown RBP14.59□□□□□ -0.07
PDF-201ENST00000288022 ST20-AS1Q8NBB2 130 aa14.59□□□□□ -0.07
PDF-201ENST00000288022 IGLV9-49A0A0B4J1Y8 123 aa14.58□□□□□ -0.08
PDF-201ENST00000288022 PAM16Q9Y3D7 125 aa14.58□□□□□ -0.08
PDF-201ENST00000288022 C4orf48Q5BLP8 95 aa14.56□□□□□ -0.08
PDF-201ENST00000288022 Q8NBF4 154 aa14.56□□□□□ -0.08
PDF-201ENST00000288022 MOBPQ13875 183 aa14.55□□□□□ -0.08
PDF-201ENST00000288022 SPATA45Q537H7 98 aa14.55□□□□□ -0.08
PDF-201ENST00000288022 HIST1H4GQ99525 98 aa14.55□□□□□ -0.08
PDF-201ENST00000288022 VAMP8Q9BV40 100 aa14.55□□□□□ -0.08
PDF-201ENST00000288022 A4D1N5 150 aa14.54□□□□□ -0.08
PDF-201ENST00000288022 SPAG11AQ6PDA7 123 aa14.54□□□□□ -0.08
PDF-201ENST00000288022 C14orf144Q96I85 54 aa14.54□□□□□ -0.08
PDF-201ENST00000288022 TRBV7-6A0A0J9YX20 115 aa14.53□□□□□ -0.08
PDF-201ENST00000288022 TMA7Q9Y2S6 64 aaKnown RBP14.53□□□□□ -0.08
PDF-201ENST00000288022 DLEU1O43261 78 aa14.52□□□□□ -0.09
PDF-201ENST00000288022 A0A1B0GWB2 263 aa14.51□□□□□ -0.09
PDF-201ENST00000288022 RETNLBQ9BQ08 111 aa14.51□□□□□ -0.09
PDF-201ENST00000288022 UBR4Q5T4S7 5183 aa14.51□□□□□ -0.09
PDF-201ENST00000288022 CTAG1AP78358 180 aa14.5□□□□□ -0.09
PDF-201ENST00000288022 SMIM11BQ8TCY0 68 aa14.5□□□□□ -0.09
PDF-201ENST00000288022 LRP2P98164 4655 aa14.49□□□□□ -0.09
PDF-201ENST00000288022 C9orf153Q5TBE3 101 aa14.49□□□□□ -0.09
PDF-201ENST00000288022 SSBP3-AS1Q7Z2R9 100 aa14.48□□□□□ -0.09
PDF-201ENST00000288022 C12orf57Q99622 126 aa14.47□□□□□ -0.09
PDF-201ENST00000288022 SLC25A34Q6PIV7 304 aa14.46□□□□□ -0.09
PDF-201ENST00000288022 TAL2Q16559 108 aa14.45□□□□□ -0.1
PDF-201ENST00000288022 DEFB105AQ8NG35 78 aa14.45□□□□□ -0.1
PDF-201ENST00000288022 SPRR1BP22528 89 aa14.44□□□□□ -0.1
PDF-201ENST00000288022 SPINK1P00995 79 aa14.42□□□□□ -0.1
PDF-201ENST00000288022 VAMP3Q15836 100 aa14.42□□□□□ -0.1
PDF-201ENST00000288022 HIGD1BQ9P298 99 aa14.42□□□□□ -0.1
PDF-201ENST00000288022 LAMTOR3Q9UHA4 124 aa14.41□□□□□ -0.1
PDF-201ENST00000288022 NHP2Q9NX24 153 aaKnown RBP14.4□□□□□ -0.1
PDF-201ENST00000288022 PYY3Q5JQD4 70 aa14.39□□□□□ -0.11
PDF-201ENST00000288022 LPAP08519 4548 aa14.38□□□□□ -0.11
PDF-201ENST00000288022 TEX49A0A1B0GTD5 131 aa14.38□□□□□ -0.11
PDF-201ENST00000288022 C2orf91Q6ZV80 131 aa14.38□□□□□ -0.11
PDF-201ENST00000288022 SLC25A20O43772 301 aa14.37□□□□□ -0.11
PDF-201ENST00000288022 Q1RN00 199 aa14.36□□□□□ -0.11
PDF-201ENST00000288022 IGLV7-46A0A075B6I9 117 aa14.34□□□□□ -0.11
PDF-201ENST00000288022 RAB37Q96AX2 223 aa14.33□□□□□ -0.12
PDF-201ENST00000288022 H7C2G1 150 aa14.32□□□□□ -0.12
PDF-201ENST00000288022 IGLV5-48A0A075B6I7 105 aa14.31□□□□□ -0.12
PDF-201ENST00000288022 CFC1BP0CG36 223 aa14.31□□□□□ -0.12
PDF-201ENST00000288022 CFC1P0CG37 223 aa14.31□□□□□ -0.12
PDF-201ENST00000288022 LINC00575Q6W349 94 aa14.31□□□□□ -0.12
PDF-201ENST00000288022 LINC01547P58512 204 aaPredicted RBP14.3□□□□□ -0.12
PDF-201ENST00000288022 RPS29P62273 56 aaKnown RBP14.3□□□□□ -0.12
PDF-201ENST00000288022 BVES-AS1Q5T3Y7 98 aa14.28□□□□□ -0.12
PDF-201ENST00000288022 CEND1Q8N111 149 aa14.28□□□□□ -0.12
PDF-201ENST00000288022 hADV29S1A0JD25 119 aa14.27□□□□□ -0.13
PDF-201ENST00000288022 FP248Q71RG6 208 aaPredicted RBP14.27□□□□□ -0.13
PDF-201ENST00000288022 A0A0B4J2C4 111 aa14.26□□□□□ -0.13
PDF-201ENST00000288022 HRCT1Q6UXD1 115 aa14.26□□□□□ -0.13
PDF-201ENST00000288022 SMIM29Q86T20 159 aa14.26□□□□□ -0.13
PDF-201ENST00000288022 TMEM238LA0A1B0GVL6 79 aa14.25□□□□□ -0.13
PDF-201ENST00000288022 A6NJY4 79 aa14.25□□□□□ -0.13
PDF-201ENST00000288022 Q8N377 158 aa14.25□□□□□ -0.13
PDF-201ENST00000288022 PRO1933Q9H354 126 aa14.24□□□□□ -0.13
PDF-201ENST00000288022 TPRXLQ17RH7 258 aa14.23□□□□□ -0.13
PDF-201ENST00000288022 Q6ZQY7 126 aa14.23□□□□□ -0.13
PDF-201ENST00000288022 CDIP1Q9H305 208 aa14.22□□□□□ -0.13
PDF-201ENST00000288022 FXYD2P54710 66 aa14.2□□□□□ -0.14
PDF-201ENST00000288022 HSD52Q0P140 79 aa14.18□□□□□ -0.14
PDF-201ENST00000288022 PRO1854Q9UHT4 67 aa14.18□□□□□ -0.14
PDF-201ENST00000288022 F8WEM9 126 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms