RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
MRPS28-201ENST00000276585 MAP1LC3CQ9BXW4 147 aa7.1□□□□□ -1.27
MRPS28-201ENST00000276585 E9PLD3 99 aa7.09□□□□□ -1.27
MRPS28-201ENST00000276585 C3orf22Q8N5N4 141 aa7.09□□□□□ -1.27
MRPS28-201ENST00000276585 A0A0J9YXY3 114 aa7.08□□□□□ -1.28
MRPS28-201ENST00000276585 LGALS3P17931 250 aaKnown RBP7.08□□□□□ -1.28
MRPS28-201ENST00000276585 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
MRPS28-201ENST00000276585 LINC01545Q5VT33 79 aa7.08□□□□□ -1.28
MRPS28-201ENST00000276585 LINC00304Q8N9R0 145 aa7.08□□□□□ -1.28
MRPS28-201ENST00000276585 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
MRPS28-201ENST00000276585 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
MRPS28-201ENST00000276585 COA6Q5JTJ3 125 aaKnown RBP7.07□□□□□ -1.28
MRPS28-201ENST00000276585 TPRXLQ17RH7 258 aa7.06□□□□□ -1.28
MRPS28-201ENST00000276585 LITAFQ99732 161 aa7.06□□□□□ -1.28
MRPS28-201ENST00000276585 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
MRPS28-201ENST00000276585 B5MCH6 92 aa7.05□□□□□ -1.28
MRPS28-201ENST00000276585 NDUFC2O95298 119 aa7.05□□□□□ -1.28
MRPS28-201ENST00000276585 DDTP30046 118 aa7.05□□□□□ -1.28
MRPS28-201ENST00000276585 SPANXB1Q9NS25 103 aaPredicted RBP7.05□□□□□ -1.28
MRPS28-201ENST00000276585 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
MRPS28-201ENST00000276585 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
MRPS28-201ENST00000276585 IGLV6-57P01721 117 aa7.04□□□□□ -1.28
MRPS28-201ENST00000276585 C3orf79P0CE67 100 aa7.04□□□□□ -1.28
MRPS28-201ENST00000276585 PET117Q6UWS5 81 aa7.04□□□□□ -1.28
MRPS28-201ENST00000276585 Q9BRP9 147 aa7.04□□□□□ -1.28
MRPS28-201ENST00000276585 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
MRPS28-201ENST00000276585 NPC2P61916 151 aa7.03□□□□□ -1.28
MRPS28-201ENST00000276585 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
MRPS28-201ENST00000276585 TTTY13Q9BZ97 58 aa7.03□□□□□ -1.28
MRPS28-201ENST00000276585 ZNF706Q9Y5V0 76 aaPredicted RBP7.02□□□□□ -1.29
MRPS28-201ENST00000276585 IGLV7-46A0A075B6I9 117 aa7.01□□□□□ -1.29
MRPS28-201ENST00000276585 S100A6P06703 90 aa7.01□□□□□ -1.29
MRPS28-201ENST00000276585 Q6ZRX8 168 aa7.01□□□□□ -1.29
MRPS28-201ENST00000276585 MIEN1Q9BRT3 115 aa7.01□□□□□ -1.29
MRPS28-201ENST00000276585 PPDPFQ9H3Y8 114 aa7.01□□□□□ -1.29
MRPS28-201ENST00000276585 TIMM17BO60830 172 aa7□□□□□ -1.29
MRPS28-201ENST00000276585 LINC00308Q8TCZ7 52 aa7□□□□□ -1.29
MRPS28-201ENST00000276585 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
MRPS28-201ENST00000276585 LOC105371267A0A1B0GV96 52 aa6.99□□□□□ -1.29
MRPS28-201ENST00000276585 CFC1BP0CG36 223 aa6.99□□□□□ -1.29
MRPS28-201ENST00000276585 CTAG1AP78358 180 aa6.99□□□□□ -1.29
MRPS28-201ENST00000276585 ZNF815PA8K554 130 aa6.98□□□□□ -1.29
MRPS28-201ENST00000276585 KRTDAPP60985 99 aa6.98□□□□□ -1.29
MRPS28-201ENST00000276585 ANKRD39Q53RE8 183 aa6.98□□□□□ -1.29
MRPS28-201ENST00000276585 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
MRPS28-201ENST00000276585 Q8NBF4 154 aa6.98□□□□□ -1.29
MRPS28-201ENST00000276585 ZNF73O43830 326 aaPredicted RBP6.97□□□□□ -1.29
MRPS28-201ENST00000276585 GAGE2AQ6NT46 116 aa6.97□□□□□ -1.29
MRPS28-201ENST00000276585 SPANXCQ9NY87 97 aa6.97□□□□□ -1.29
MRPS28-201ENST00000276585 S100A12P80511 92 aa6.96□□□□□ -1.3
MRPS28-201ENST00000276585 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
MRPS28-201ENST00000276585 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
MRPS28-201ENST00000276585 MOBPQ13875 183 aa6.94□□□□□ -1.3
MRPS28-201ENST00000276585 ATOH7Q8N100 152 aa6.94□□□□□ -1.3
MRPS28-201ENST00000276585 ST20-AS1Q8NBB2 130 aa6.94□□□□□ -1.3
MRPS28-201ENST00000276585 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
MRPS28-201ENST00000276585 SPANXDQ9BXN6 97 aa6.93□□□□□ -1.3
MRPS28-201ENST00000276585 IGLV9-49A0A0B4J1Y8 123 aa6.92□□□□□ -1.3
MRPS28-201ENST00000276585 PCP2Q8IVA1 136 aa6.92□□□□□ -1.3
MRPS28-201ENST00000276585 C20orf202A1L168 122 aa6.91□□□□□ -1.3
MRPS28-201ENST00000276585 MT1HP80294 61 aa6.91□□□□□ -1.3
MRPS28-201ENST00000276585 JOSD1Q15040 202 aaPredicted RBP6.91□□□□□ -1.3
MRPS28-201ENST00000276585 HIST3H2BBQ8N257 126 aa6.91□□□□□ -1.3
MRPS28-201ENST00000276585 OR13C6PQ8NH95 151 aa6.9□□□□□ -1.3
MRPS28-201ENST00000276585 C5orf52A6NGY3 159 aa6.89□□□□□ -1.31
MRPS28-201ENST00000276585 SPINK1P00995 79 aa6.89□□□□□ -1.31
MRPS28-201ENST00000276585 SPRR1BP22528 89 aa6.89□□□□□ -1.31
MRPS28-201ENST00000276585 S100A2P29034 98 aa6.89□□□□□ -1.31
MRPS28-201ENST00000276585 AKR1D1P51857 326 aa6.89□□□□□ -1.31
MRPS28-201ENST00000276585 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
MRPS28-201ENST00000276585 FP248Q71RG6 208 aaPredicted RBP6.89□□□□□ -1.31
MRPS28-201ENST00000276585 SSBP3-AS1Q7Z2R9 100 aa6.89□□□□□ -1.31
MRPS28-201ENST00000276585 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
MRPS28-201ENST00000276585 SMIM6P0DI80 62 aa6.88□□□□□ -1.31
MRPS28-201ENST00000276585 ELOF1P60002 83 aaKnown RBP6.88□□□□□ -1.31
MRPS28-201ENST00000276585 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
MRPS28-201ENST00000276585 KRTAP13-3Q3SY46 172 aa6.88□□□□□ -1.31
MRPS28-201ENST00000276585 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
MRPS28-201ENST00000276585 Q8N377 158 aa6.88□□□□□ -1.31
MRPS28-201ENST00000276585 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
MRPS28-201ENST00000276585 SNRPEP62304 92 aaKnown RBP6.87□□□□□ -1.31
MRPS28-201ENST00000276585 C6orf99Q4VX62 202 aa6.87□□□□□ -1.31
MRPS28-201ENST00000276585 LINC00518Q8N0U6 118 aa6.87□□□□□ -1.31
MRPS28-201ENST00000276585 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
MRPS28-201ENST00000276585 IFITM1P13164 125 aa6.86□□□□□ -1.31
MRPS28-201ENST00000276585 COX7BP24311 80 aa6.85□□□□□ -1.31
MRPS28-201ENST00000276585 MUSTN1Q8IVN3 82 aa6.85□□□□□ -1.31
MRPS28-201ENST00000276585 DHRS4-AS1Q9P1J3 65 aa6.85□□□□□ -1.31
MRPS28-201ENST00000276585 HINT1P49773 126 aaPredicted RBP6.84□□□□□ -1.31
MRPS28-201ENST00000276585 C9orf153Q5TBE3 101 aa6.84□□□□□ -1.31
MRPS28-201ENST00000276585 Q6ZVH6 145 aa6.84□□□□□ -1.31
MRPS28-201ENST00000276585 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
MRPS28-201ENST00000276585 TRBV7-6A0A0J9YX20 115 aa6.83□□□□□ -1.32
MRPS28-201ENST00000276585 M0R2T5 61 aa6.81□□□□□ -1.32
MRPS28-201ENST00000276585 C12orf57Q99622 126 aa6.81□□□□□ -1.32
MRPS28-201ENST00000276585 SLC25A20O43772 301 aa6.8□□□□□ -1.32
MRPS28-201ENST00000276585 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
MRPS28-201ENST00000276585 COPS9Q8WXC6 57 aa6.8□□□□□ -1.32
MRPS28-201ENST00000276585 IGLV5-48A0A075B6I7 105 aa6.79□□□□□ -1.32
MRPS28-201ENST00000276585 A0A1B0GWB2 263 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms