RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 STARD9Q9P2P6 4700 aa12.15□□□□□ -0.46
PDLIM4-201ENST00000253754 FAM168BA1KXE4 195 aa12.14□□□□□ -0.47
PDLIM4-201ENST00000253754 RPS28P62857 69 aaKnown RBP12.14□□□□□ -0.47
PDLIM4-201ENST00000253754 Q6JHZ5 121 aa12.14□□□□□ -0.47
PDLIM4-201ENST00000253754 Q6ZQT0 140 aa12.14□□□□□ -0.47
PDLIM4-201ENST00000253754 APLNQ9ULZ1 77 aa12.14□□□□□ -0.47
PDLIM4-201ENST00000253754 LINC00528Q8N1L1 170 aa12.13□□□□□ -0.47
PDLIM4-201ENST00000253754 NKAPP1Q8N9T2 125 aa12.13□□□□□ -0.47
PDLIM4-201ENST00000253754 C7orf33Q8WU49 177 aa12.13□□□□□ -0.47
PDLIM4-201ENST00000253754 TRBV7-6A0A0J9YX20 115 aa12.13□□□□□ -0.47
PDLIM4-201ENST00000253754 DYNC2H1Q8NCM8 4307 aaKnown RBP12.12□□□□□ -0.47
PDLIM4-201ENST00000253754 DNAH10Q8IVF4 4471 aa12.12□□□□□ -0.47
PDLIM4-201ENST00000253754 A0A087WVE0 104 aa12.12□□□□□ -0.47
PDLIM4-201ENST00000253754 LOC107984640A0A0U1RRK4 108 aa12.12□□□□□ -0.47
PDLIM4-201ENST00000253754 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.12□□□□□ -0.47
PDLIM4-201ENST00000253754 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
PDLIM4-201ENST00000253754 FAM19A5Q7Z5A7 132 aaPredicted RBP12.12□□□□□ -0.47
PDLIM4-201ENST00000253754 LOC110117498A0A087WWA1 95 aa12.1□□□□□ -0.47
PDLIM4-201ENST00000253754 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
PDLIM4-201ENST00000253754 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
PDLIM4-201ENST00000253754 KRTAP1-5Q9BYS1 174 aa12.1□□□□□ -0.47
PDLIM4-201ENST00000253754 PLECQ15149 4684 aaKnown RBP12.1□□□□□ -0.47
PDLIM4-201ENST00000253754 RPL37AP8A6NKH3 93 aa12.09□□□□□ -0.47
PDLIM4-201ENST00000253754 UBE2DNLQ8IWF7 75 aa12.09□□□□□ -0.47
PDLIM4-201ENST00000253754 RMI2Q96E14 147 aa12.08□□□□□ -0.48
PDLIM4-201ENST00000253754 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
PDLIM4-201ENST00000253754 KCNQ1DNQ9H478 68 aa12.08□□□□□ -0.48
PDLIM4-201ENST00000253754 CRYGAP11844 174 aa12.07□□□□□ -0.48
PDLIM4-201ENST00000253754 KRTAP7-1Q8IUC3 87 aa12.07□□□□□ -0.48
PDLIM4-201ENST00000253754 COX7CP15954 63 aa12.06□□□□□ -0.48
PDLIM4-201ENST00000253754 HIST1H4AP62805 103 aaKnown RBP12.06□□□□□ -0.48
PDLIM4-201ENST00000253754 H3BQ85 93 aa12.04□□□□□ -0.48
PDLIM4-201ENST00000253754 UBL5Q9BZL1 73 aa12.04□□□□□ -0.48
PDLIM4-201ENST00000253754 PLA2G2DQ9UNK4 145 aa12.02□□□□□ -0.49
PDLIM4-201ENST00000253754 TRBV7-4A0A0J9YYF1 115 aa12.02□□□□□ -0.49
PDLIM4-201ENST00000253754 FAM19A1Q7Z5A9 133 aa12□□□□□ -0.49
PDLIM4-201ENST00000253754 DEFB105AQ8NG35 78 aa12□□□□□ -0.49
PDLIM4-201ENST00000253754 IGLV1-50A0A075B6I6 118 aa12□□□□□ -0.49
PDLIM4-201ENST00000253754 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
PDLIM4-201ENST00000253754 GHRHP01286 108 aa11.98□□□□□ -0.49
PDLIM4-201ENST00000253754 ATP5EP2Q5VTU8 51 aa11.98□□□□□ -0.49
PDLIM4-201ENST00000253754 Q6ZVQ6 151 aa11.98□□□□□ -0.49
PDLIM4-201ENST00000253754 KRTAP4-16G5E9R7 235 aaPredicted RBP11.97□□□□□ -0.49
PDLIM4-201ENST00000253754 ATOX1O00244 68 aa11.97□□□□□ -0.49
PDLIM4-201ENST00000253754 PDE6GP18545 87 aa11.97□□□□□ -0.49
PDLIM4-201ENST00000253754 Q9BRP9 147 aa11.97□□□□□ -0.49
PDLIM4-201ENST00000253754 Q6ZRX8 168 aa11.97□□□□□ -0.49
PDLIM4-201ENST00000253754 MRPL55Q7Z7F7 128 aaKnown RBP11.96□□□□□ -0.49
PDLIM4-201ENST00000253754 PRYO14603 147 aa11.95□□□□□ -0.5
PDLIM4-201ENST00000253754 TMEM258P61165 79 aa11.95□□□□□ -0.5
PDLIM4-201ENST00000253754 Q8N377 158 aa11.95□□□□□ -0.5
PDLIM4-201ENST00000253754 PSCAO43653 123 aa11.94□□□□□ -0.5
PDLIM4-201ENST00000253754 HAMPP81172 84 aa11.94□□□□□ -0.5
PDLIM4-201ENST00000253754 ETDCA0A1B0GVM5 59 aa11.94□□□□□ -0.5
PDLIM4-201ENST00000253754 SPRR1AP35321 89 aa11.94□□□□□ -0.5
PDLIM4-201ENST00000253754 LINC01547P58512 204 aaPredicted RBP11.94□□□□□ -0.5
PDLIM4-201ENST00000253754 A0A096LNI7 61 aa11.93□□□□□ -0.5
PDLIM4-201ENST00000253754 IGKV2-24A0A0C4DH68 120 aa11.93□□□□□ -0.5
PDLIM4-201ENST00000253754 ST20-AS1Q8NBB2 130 aa11.93□□□□□ -0.5
PDLIM4-201ENST00000253754 DPH3Q96FX2 82 aa11.93□□□□□ -0.5
PDLIM4-201ENST00000253754 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.92□□□□□ -0.5
PDLIM4-201ENST00000253754 DHRS4-AS1Q9P1J3 65 aa11.9□□□□□ -0.5
PDLIM4-201ENST00000253754 ERC2-IT1O76042 136 aa11.9□□□□□ -0.5
PDLIM4-201ENST00000253754 SCXQ7RTU7 201 aa11.89□□□□□ -0.51
PDLIM4-201ENST00000253754 CYSTM1Q9H1C7 97 aa11.89□□□□□ -0.51
PDLIM4-201ENST00000253754 KMT2AQ03164 3969 aa11.89□□□□□ -0.51
PDLIM4-201ENST00000253754 NBDYA0A0U1RRE5 68 aa11.89□□□□□ -0.51
PDLIM4-201ENST00000253754 VPS13DQ5THJ4 4388 aa11.89□□□□□ -0.51
PDLIM4-201ENST00000253754 A0A1W2PNN7 141 aa11.88□□□□□ -0.51
PDLIM4-201ENST00000253754 CNBPP62633 177 aaKnown RBP11.87□□□□□ -0.51
PDLIM4-201ENST00000253754 OXTP01178 125 aa11.86□□□□□ -0.51
PDLIM4-201ENST00000253754 C16orf90A8MZG2 172 aa11.85□□□□□ -0.51
PDLIM4-201ENST00000253754 UBE2BP63146 152 aa11.85□□□□□ -0.51
PDLIM4-201ENST00000253754 REG3GQ6UW15 175 aa11.85□□□□□ -0.51
PDLIM4-201ENST00000253754 Q5XG85 94 aa11.85□□□□□ -0.51
PDLIM4-201ENST00000253754 SERP2Q8N6R1 65 aa11.85□□□□□ -0.51
PDLIM4-201ENST00000253754 WWC2-AS2Q96NR7 200 aa11.85□□□□□ -0.51
PDLIM4-201ENST00000253754 C3orf84H3BNL1 204 aa11.84□□□□□ -0.51
PDLIM4-201ENST00000253754 CHTF8P0CG12 524 aa11.84□□□□□ -0.51
PDLIM4-201ENST00000253754 IGLV5-48A0A075B6I7 105 aa11.83□□□□□ -0.52
PDLIM4-201ENST00000253754 CXCL6P80162 114 aa11.82□□□□□ -0.52
PDLIM4-201ENST00000253754 PRLHP81277 87 aa11.8□□□□□ -0.52
PDLIM4-201ENST00000253754 C4orf26Q17RF5 130 aa11.8□□□□□ -0.52
PDLIM4-201ENST00000253754 TNP2Q05952 138 aa11.79□□□□□ -0.52
PDLIM4-201ENST00000253754 HYDINQ4G0P3 5121 aa11.78□□□□□ -0.52
PDLIM4-201ENST00000253754 KRTAP11-1Q8IUC1 163 aa11.77□□□□□ -0.52
PDLIM4-201ENST00000253754 LRCOL1A6NCL2 159 aa11.77□□□□□ -0.53
PDLIM4-201ENST00000253754 Q8N9L7 120 aa11.77□□□□□ -0.53
PDLIM4-201ENST00000253754 A0A1W2PNM2 257 aa11.76□□□□□ -0.53
PDLIM4-201ENST00000253754 C14orf177Q52M58 125 aa11.76□□□□□ -0.53
PDLIM4-201ENST00000253754 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
PDLIM4-201ENST00000253754 HRCT1Q6UXD1 115 aa11.76□□□□□ -0.53
PDLIM4-201ENST00000253754 PHF5AQ7RTV0 110 aaKnown RBP11.76□□□□□ -0.53
PDLIM4-201ENST00000253754 LY6G6CO95867 125 aa11.75□□□□□ -0.53
PDLIM4-201ENST00000253754 NREPQ16612 68 aa11.75□□□□□ -0.53
PDLIM4-201ENST00000253754 Q6ZRN7 208 aaPredicted RBP11.75□□□□□ -0.53
PDLIM4-201ENST00000253754 SMIM29Q86T20 159 aa11.74□□□□□ -0.53
PDLIM4-201ENST00000253754 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
PDLIM4-201ENST00000253754 HIGD2AQ9BW72 106 aa11.72□□□□□ -0.53
PDLIM4-201ENST00000253754 Q6ZR54 194 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms