RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 PPDPFLQ8WWR9 84 aa11.17□□□□□ -0.62
HOXC6-201ENST00000243108 HERC1Q15751 4861 aa11.17□□□□□ -0.62
HOXC6-201ENST00000243108 J3QR89 54 aa11.16□□□□□ -0.62
HOXC6-201ENST00000243108 Q6ZSA8 131 aa11.15□□□□□ -0.62
HOXC6-201ENST00000243108 IGLV6-57P01721 117 aa11.15□□□□□ -0.63
HOXC6-201ENST00000243108 SLPIP03973 132 aa11.15□□□□□ -0.63
HOXC6-201ENST00000243108 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.63
HOXC6-201ENST00000243108 Q6ZRP5 223 aa11.15□□□□□ -0.63
HOXC6-201ENST00000243108 VPREB1P12018 145 aa11.14□□□□□ -0.63
HOXC6-201ENST00000243108 S100A7L2Q5SY68 101 aa11.14□□□□□ -0.63
HOXC6-201ENST00000243108 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
HOXC6-201ENST00000243108 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
HOXC6-201ENST00000243108 A0A087WYN8 130 aa11.12□□□□□ -0.63
HOXC6-201ENST00000243108 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
HOXC6-201ENST00000243108 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
HOXC6-201ENST00000243108 GAGE2DQ9UEU5 116 aa11.1□□□□□ -0.63
HOXC6-201ENST00000243108 A0A1B0GX51 115 aa11.09□□□□□ -0.63
HOXC6-201ENST00000243108 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
HOXC6-201ENST00000243108 C6orf99Q4VX62 202 aa11.09□□□□□ -0.63
HOXC6-201ENST00000243108 VPS25Q9BRG1 176 aa11.09□□□□□ -0.63
HOXC6-201ENST00000243108 TRBV10-3A0A0K0K1G6 114 aa11.08□□□□□ -0.64
HOXC6-201ENST00000243108 M0R378 163 aa11.08□□□□□ -0.64
HOXC6-201ENST00000243108 DNAL4O96015 105 aa11.07□□□□□ -0.64
HOXC6-201ENST00000243108 BAALC-AS2P0C853 105 aa11.07□□□□□ -0.64
HOXC6-201ENST00000243108 TEX49A0A1B0GTD5 131 aa11.06□□□□□ -0.64
HOXC6-201ENST00000243108 FAM229AH3BQW9 127 aa11.06□□□□□ -0.64
HOXC6-201ENST00000243108 LINC00167Q96N53 147 aa11.06□□□□□ -0.64
HOXC6-201ENST00000243108 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
HOXC6-201ENST00000243108 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
HOXC6-201ENST00000243108 DMBT1Q9UGM3 2413 aaPredicted RBP11.06□□□□□ -0.64
HOXC6-201ENST00000243108 SCXQ7RTU7 201 aa11.05□□□□□ -0.64
HOXC6-201ENST00000243108 TRAV23DV6A0A075B6W5 121 aa11.04□□□□□ -0.64
HOXC6-201ENST00000243108 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
HOXC6-201ENST00000243108 LOC107984640A0A0U1RRK4 108 aa11.02□□□□□ -0.65
HOXC6-201ENST00000243108 C14orf177Q52M58 125 aa11.02□□□□□ -0.65
HOXC6-201ENST00000243108 LINC00575Q6W349 94 aa11.02□□□□□ -0.65
HOXC6-201ENST00000243108 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
HOXC6-201ENST00000243108 CBY1Q9Y3M2 126 aa11.02□□□□□ -0.65
HOXC6-201ENST00000243108 IGLV5-37A0A075B6J1 123 aa11.01□□□□□ -0.65
HOXC6-201ENST00000243108 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
HOXC6-201ENST00000243108 CIRBP-AS1Q8TBR5 109 aa11.01□□□□□ -0.65
HOXC6-201ENST00000243108 DIRC1Q969H9 104 aa11.01□□□□□ -0.65
HOXC6-201ENST00000243108 TRBV7-6A0A0J9YX20 115 aa11.01□□□□□ -0.65
HOXC6-201ENST00000243108 ZNF73O43830 326 aaPredicted RBP11□□□□□ -0.65
HOXC6-201ENST00000243108 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
HOXC6-201ENST00000243108 ORMDL1Q9P0S3 153 aa10.99□□□□□ -0.65
HOXC6-201ENST00000243108 LRP1Q07954 4544 aaKnown RBP10.99□□□□□ -0.65
HOXC6-201ENST00000243108 SNCGO76070 127 aa10.98□□□□□ -0.65
HOXC6-201ENST00000243108 KRTAP10-4P60372 401 aaPredicted RBP10.98□□□□□ -0.65
HOXC6-201ENST00000243108 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
HOXC6-201ENST00000243108 ELOF1P60002 83 aaKnown RBP10.97□□□□□ -0.65
HOXC6-201ENST00000243108 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
HOXC6-201ENST00000243108 C7orf33Q8WU49 177 aa10.97□□□□□ -0.65
HOXC6-201ENST00000243108 CDIP1Q9H305 208 aa10.97□□□□□ -0.65
HOXC6-201ENST00000243108 PANO1I0J062 215 aa10.96□□□□□ -0.65
HOXC6-201ENST00000243108 hADV29S1A0JD25 119 aa10.95□□□□□ -0.66
HOXC6-201ENST00000243108 COX7BP24311 80 aa10.95□□□□□ -0.66
HOXC6-201ENST00000243108 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
HOXC6-201ENST00000243108 OBSCN-AS1Q96MR7 158 aa10.95□□□□□ -0.66
HOXC6-201ENST00000243108 KCNQ1DNQ9H478 68 aa10.95□□□□□ -0.66
HOXC6-201ENST00000243108 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
HOXC6-201ENST00000243108 PLA2G1BP04054 148 aaKnown RBP10.95□□□□□ -0.66
HOXC6-201ENST00000243108 PKHD1L1Q86WI1 4243 aa10.95□□□□□ -0.66
HOXC6-201ENST00000243108 FAM168BA1KXE4 195 aa10.94□□□□□ -0.66
HOXC6-201ENST00000243108 SDIM1Q6ZPB5 146 aa10.94□□□□□ -0.66
HOXC6-201ENST00000243108 FAT3Q8TDW7 4589 aa10.93□□□□□ -0.66
HOXC6-201ENST00000243108 FAM240AA0A1B0GVK7 77 aa10.92□□□□□ -0.66
HOXC6-201ENST00000243108 TMEM256-PLSCR3K7ERE1 68 aa10.92□□□□□ -0.66
HOXC6-201ENST00000243108 A0A096LNI7 61 aa10.9□□□□□ -0.66
HOXC6-201ENST00000243108 IGLV1-50A0A075B6I6 118 aa10.89□□□□□ -0.67
HOXC6-201ENST00000243108 PRYO14603 147 aa10.89□□□□□ -0.67
HOXC6-201ENST00000243108 H3BQ85 93 aa10.88□□□□□ -0.67
HOXC6-201ENST00000243108 FAM19A5Q7Z5A7 132 aaPredicted RBP10.88□□□□□ -0.67
HOXC6-201ENST00000243108 MRPL55Q7Z7F7 128 aaKnown RBP10.88□□□□□ -0.67
HOXC6-201ENST00000243108 SIGMAR1Q99720 223 aa10.88□□□□□ -0.67
HOXC6-201ENST00000243108 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.87□□□□□ -0.67
HOXC6-201ENST00000243108 Q6ZQY7 126 aa10.87□□□□□ -0.67
HOXC6-201ENST00000243108 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
HOXC6-201ENST00000243108 SPRR1AP35321 89 aa10.87□□□□□ -0.67
HOXC6-201ENST00000243108 PKIGQ9Y2B9 76 aa10.87□□□□□ -0.67
HOXC6-201ENST00000243108 ACYP1P07311 99 aa10.86□□□□□ -0.67
HOXC6-201ENST00000243108 CHTF8P0CG12 524 aa10.86□□□□□ -0.67
HOXC6-201ENST00000243108 RPL37AP8A6NKH3 93 aa10.85□□□□□ -0.67
HOXC6-201ENST00000243108 JMJD7-PLA2G4BH0Y9G9 81 aa10.85□□□□□ -0.67
HOXC6-201ENST00000243108 IGKV2-24A0A0C4DH68 120 aa10.84□□□□□ -0.67
HOXC6-201ENST00000243108 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
HOXC6-201ENST00000243108 C14orf132Q9NPU4 83 aa10.84□□□□□ -0.67
HOXC6-201ENST00000243108 A0A1W2PNN7 141 aa10.83□□□□□ -0.68
HOXC6-201ENST00000243108 B5MCH6 92 aa10.81□□□□□ -0.68
HOXC6-201ENST00000243108 J3QL48 77 aa10.81□□□□□ -0.68
HOXC6-201ENST00000243108 GHRHP01286 108 aa10.81□□□□□ -0.68
HOXC6-201ENST00000243108 RPL37AP61513 92 aaKnown RBP10.81□□□□□ -0.68
HOXC6-201ENST00000243108 SPACA4Q8TDM5 124 aa10.81□□□□□ -0.68
HOXC6-201ENST00000243108 Q6ZRX8 168 aa10.81□□□□□ -0.68
HOXC6-201ENST00000243108 MT-ATP8P03928 68 aa10.79□□□□□ -0.68
HOXC6-201ENST00000243108 ETDCA0A1B0GVM5 59 aa10.78□□□□□ -0.68
HOXC6-201ENST00000243108 GAGE2AQ6NT46 116 aa10.78□□□□□ -0.68
HOXC6-201ENST00000243108 DHRS4-AS1Q9P1J3 65 aa10.78□□□□□ -0.68
HOXC6-201ENST00000243108 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
HOXC6-201ENST00000243108 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms