RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CLEC2BQ92478 149 aa8.5□□□□□ -1.05
SLIRP-201ENST00000238688 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
SLIRP-201ENST00000238688 Q8NDZ9 215 aa8.49□□□□□ -1.05
SLIRP-201ENST00000238688 TRBV10-3A0A0K0K1G6 114 aa8.48□□□□□ -1.05
SLIRP-201ENST00000238688 LECT2O14960 151 aa8.48□□□□□ -1.05
SLIRP-201ENST00000238688 ZNF73O43830 326 aaPredicted RBP8.48□□□□□ -1.05
SLIRP-201ENST00000238688 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
SLIRP-201ENST00000238688 WFDC2Q14508 124 aa8.48□□□□□ -1.05
SLIRP-201ENST00000238688 Q8N814 137 aa8.48□□□□□ -1.05
SLIRP-201ENST00000238688 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
SLIRP-201ENST00000238688 PRYO14603 147 aa8.47□□□□□ -1.05
SLIRP-201ENST00000238688 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
SLIRP-201ENST00000238688 C6orf99Q4VX62 202 aa8.47□□□□□ -1.05
SLIRP-201ENST00000238688 OCIAD2Q56VL3 154 aa8.47□□□□□ -1.05
SLIRP-201ENST00000238688 PPDPFLQ8WWR9 84 aa8.47□□□□□ -1.05
SLIRP-201ENST00000238688 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
SLIRP-201ENST00000238688 A0A087WTM6 91 aa8.46□□□□□ -1.06
SLIRP-201ENST00000238688 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-201ENST00000238688 GAGE2BQ13066 116 aa8.46□□□□□ -1.06
SLIRP-201ENST00000238688 ETDBQ3ZM63 59 aa8.46□□□□□ -1.06
SLIRP-201ENST00000238688 INAFM2P0DMQ5 153 aa8.44□□□□□ -1.06
SLIRP-201ENST00000238688 ELOF1P60002 83 aaKnown RBP8.44□□□□□ -1.06
SLIRP-201ENST00000238688 LINC00575Q6W349 94 aa8.44□□□□□ -1.06
SLIRP-201ENST00000238688 COX7BP24311 80 aa8.43□□□□□ -1.06
SLIRP-201ENST00000238688 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
SLIRP-201ENST00000238688 MRPL55Q7Z7F7 128 aaKnown RBP8.43□□□□□ -1.06
SLIRP-201ENST00000238688 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
SLIRP-201ENST00000238688 FAM218AQ96MZ4 157 aa8.43□□□□□ -1.06
SLIRP-201ENST00000238688 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
SLIRP-201ENST00000238688 TMEM256-PLSCR3K7ERE1 68 aa8.42□□□□□ -1.06
SLIRP-201ENST00000238688 BAALC-AS2P0C853 105 aa8.42□□□□□ -1.06
SLIRP-201ENST00000238688 C21orf62-AS1Q17RA5 79 aa8.42□□□□□ -1.06
SLIRP-201ENST00000238688 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
SLIRP-201ENST00000238688 IGLV1-50A0A075B6I6 118 aa8.41□□□□□ -1.06
SLIRP-201ENST00000238688 A0A087WYN8 130 aa8.41□□□□□ -1.06
SLIRP-201ENST00000238688 A0A096LNI7 61 aa8.41□□□□□ -1.06
SLIRP-201ENST00000238688 hADV29S1A0JD25 119 aa8.41□□□□□ -1.06
SLIRP-201ENST00000238688 SPRR1AP35321 89 aa8.41□□□□□ -1.06
SLIRP-201ENST00000238688 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.41□□□□□ -1.06
SLIRP-201ENST00000238688 C22orf24Q9Y442 160 aa8.41□□□□□ -1.06
SLIRP-201ENST00000238688 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.4□□□□□ -1.06
SLIRP-201ENST00000238688 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
SLIRP-201ENST00000238688 DHRS4-AS1Q9P1J3 65 aa8.4□□□□□ -1.06
SLIRP-201ENST00000238688 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
SLIRP-201ENST00000238688 Q8N1X5 172 aa8.39□□□□□ -1.07
SLIRP-201ENST00000238688 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
SLIRP-201ENST00000238688 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
SLIRP-201ENST00000238688 FAT1Q14517 4588 aa8.38□□□□□ -1.07
SLIRP-201ENST00000238688 JMJD7-PLA2G4BH0Y9G9 81 aa8.37□□□□□ -1.07
SLIRP-201ENST00000238688 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-201ENST00000238688 FAM240AA0A1B0GVK7 77 aa8.36□□□□□ -1.07
SLIRP-201ENST00000238688 XGP55808 180 aa8.36□□□□□ -1.07
SLIRP-201ENST00000238688 Q6ZRX8 168 aa8.36□□□□□ -1.07
SLIRP-201ENST00000238688 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
SLIRP-201ENST00000238688 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
SLIRP-201ENST00000238688 ETDCA0A1B0GVM5 59 aa8.35□□□□□ -1.07
SLIRP-201ENST00000238688 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
SLIRP-201ENST00000238688 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
SLIRP-201ENST00000238688 KRTAP7-1Q8IUC3 87 aa8.35□□□□□ -1.07
SLIRP-201ENST00000238688 OBSCN-AS1Q96MR7 158 aa8.35□□□□□ -1.07
SLIRP-201ENST00000238688 FAM168BA1KXE4 195 aa8.34□□□□□ -1.07
SLIRP-201ENST00000238688 H0Y9J4 135 aa8.34□□□□□ -1.07
SLIRP-201ENST00000238688 ACYP1P07311 99 aa8.34□□□□□ -1.07
SLIRP-201ENST00000238688 REG3GQ6UW15 175 aa8.34□□□□□ -1.07
SLIRP-201ENST00000238688 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.07
SLIRP-201ENST00000238688 VPS13BQ7Z7G8 4022 aa8.33□□□□□ -1.08
SLIRP-201ENST00000238688 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
SLIRP-201ENST00000238688 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
SLIRP-201ENST00000238688 PDE6GP18545 87 aa8.32□□□□□ -1.08
SLIRP-201ENST00000238688 A0A1W2PNN7 141 aa8.31□□□□□ -1.08
SLIRP-201ENST00000238688 B5MCH6 92 aa8.31□□□□□ -1.08
SLIRP-201ENST00000238688 Q6ZQY7 126 aa8.31□□□□□ -1.08
SLIRP-201ENST00000238688 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
SLIRP-201ENST00000238688 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
SLIRP-201ENST00000238688 UBE2BP63146 152 aa8.28□□□□□ -1.08
SLIRP-201ENST00000238688 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
SLIRP-201ENST00000238688 CHTF8P0CG12 524 aa8.26□□□□□ -1.09
SLIRP-201ENST00000238688 VPS25Q9BRG1 176 aa8.26□□□□□ -1.09
SLIRP-201ENST00000238688 IGLV5-48A0A075B6I7 105 aa8.25□□□□□ -1.09
SLIRP-201ENST00000238688 RBM3P98179 157 aaKnown RBP8.25□□□□□ -1.09
SLIRP-201ENST00000238688 DPH3Q96FX2 82 aa8.25□□□□□ -1.09
SLIRP-201ENST00000238688 LOC110117498A0A087WWA1 95 aa8.24□□□□□ -1.09
SLIRP-201ENST00000238688 HAMPP81172 84 aa8.24□□□□□ -1.09
SLIRP-201ENST00000238688 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
SLIRP-201ENST00000238688 BCE1O60756 84 aa8.23□□□□□ -1.09
SLIRP-201ENST00000238688 Q9BRP9 147 aa8.23□□□□□ -1.09
SLIRP-201ENST00000238688 LAMTOR3Q9UHA4 124 aa8.23□□□□□ -1.09
SLIRP-201ENST00000238688 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
SLIRP-201ENST00000238688 A0A1B0GW54 56 aa8.22□□□□□ -1.09
SLIRP-201ENST00000238688 SMR3BP02814 79 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-201ENST00000238688 Q5VSD8 79 aa8.22□□□□□ -1.09
SLIRP-201ENST00000238688 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
SLIRP-201ENST00000238688 DSCR8Q96T75 97 aa8.22□□□□□ -1.09
SLIRP-201ENST00000238688 HERC1Q15751 4861 aa8.22□□□□□ -1.09
SLIRP-201ENST00000238688 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.1
SLIRP-201ENST00000238688 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
SLIRP-201ENST00000238688 MYCBP2O75592 4640 aa8.21□□□□□ -1.1
SLIRP-201ENST00000238688 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
SLIRP-201ENST00000238688 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
SLIRP-201ENST00000238688 CCKP06307 115 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms