RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 C6orf48Q9UBA6 75 aa11.77□□□□□ -0.52
CDKN1B-201ENST00000228872 TRRAPQ9Y4A5 3859 aa11.75□□□□□ -0.53
CDKN1B-201ENST00000228872 HIGD2AQ9BW72 106 aa11.75□□□□□ -0.53
CDKN1B-201ENST00000228872 CELA1Q9UNI1 258 aa11.73□□□□□ -0.53
CDKN1B-201ENST00000228872 VPREB1P12018 145 aa11.72□□□□□ -0.53
CDKN1B-201ENST00000228872 DAD1P61803 113 aa11.72□□□□□ -0.53
CDKN1B-201ENST00000228872 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
CDKN1B-201ENST00000228872 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
CDKN1B-201ENST00000228872 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
CDKN1B-201ENST00000228872 V9GYY9 64 aa11.7□□□□□ -0.54
CDKN1B-201ENST00000228872 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
CDKN1B-201ENST00000228872 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
CDKN1B-201ENST00000228872 FBN1P35555 2871 aaKnown RBP11.68□□□□□ -0.54
CDKN1B-201ENST00000228872 DEFB4AO15263 64 aa11.68□□□□□ -0.54
CDKN1B-201ENST00000228872 HIGD2BQ4VC39 106 aa11.68□□□□□ -0.54
CDKN1B-201ENST00000228872 M0R378 163 aa11.67□□□□□ -0.54
CDKN1B-201ENST00000228872 LELP1Q5T871 98 aa11.66□□□□□ -0.54
CDKN1B-201ENST00000228872 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
CDKN1B-201ENST00000228872 hDV103S1A0JD37 113 aa11.65□□□□□ -0.54
CDKN1B-201ENST00000228872 DEFB135Q30KP9 77 aa11.65□□□□□ -0.54
CDKN1B-201ENST00000228872 SMIM29Q86T20 159 aa11.65□□□□□ -0.54
CDKN1B-201ENST00000228872 CMYA5Q8N3K9 4069 aa11.65□□□□□ -0.54
CDKN1B-201ENST00000228872 APOC4P55056 127 aa11.63□□□□□ -0.55
CDKN1B-201ENST00000228872 LCE6AA0A183 80 aa11.62□□□□□ -0.55
CDKN1B-201ENST00000228872 EGFEM1PQ0D2K5 195 aa11.62□□□□□ -0.55
CDKN1B-201ENST00000228872 SEC61GP60059 68 aa11.61□□□□□ -0.55
CDKN1B-201ENST00000228872 CAMK2N2Q96S95 79 aa11.61□□□□□ -0.55
CDKN1B-201ENST00000228872 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
CDKN1B-201ENST00000228872 KRTAP10-11P60412 298 aa11.58□□□□□ -0.56
CDKN1B-201ENST00000228872 DEFB105AQ8NG35 78 aa11.58□□□□□ -0.56
CDKN1B-201ENST00000228872 LRCOL1A6NCL2 159 aa11.58□□□□□ -0.56
CDKN1B-201ENST00000228872 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
CDKN1B-201ENST00000228872 Q8N377 158 aa11.58□□□□□ -0.56
CDKN1B-201ENST00000228872 IGLV5-48A0A075B6I7 105 aa11.57□□□□□ -0.56
CDKN1B-201ENST00000228872 HTN3P15516 51 aa11.57□□□□□ -0.56
CDKN1B-201ENST00000228872 Q6ZRP5 223 aa11.57□□□□□ -0.56
CDKN1B-201ENST00000228872 Q6ZRU5 148 aa11.57□□□□□ -0.56
CDKN1B-201ENST00000228872 C1orf64Q8NEQ6 169 aa11.57□□□□□ -0.56
CDKN1B-201ENST00000228872 Q1T7F1 81 aa11.57□□□□□ -0.56
CDKN1B-201ENST00000228872 PRR15Q8IV56 129 aa11.57□□□□□ -0.56
CDKN1B-201ENST00000228872 MAST4O15021 2626 aa11.56□□□□□ -0.56
CDKN1B-201ENST00000228872 ZCCHC13Q8WW36 166 aaKnown RBP11.56□□□□□ -0.56
CDKN1B-201ENST00000228872 STAB1Q9NY15 2570 aa11.54□□□□□ -0.56
CDKN1B-201ENST00000228872 A0A1W2PNM2 257 aa11.53□□□□□ -0.56
CDKN1B-201ENST00000228872 ANK2Q01484 3957 aa11.53□□□□□ -0.56
CDKN1B-201ENST00000228872 PKD1L1Q8TDX9 2849 aa11.53□□□□□ -0.56
CDKN1B-201ENST00000228872 Q8NAQ8 132 aa11.53□□□□□ -0.56
CDKN1B-201ENST00000228872 DNAH3Q8TD57 4116 aa11.52□□□□□ -0.56
CDKN1B-201ENST00000228872 A0A1B0GW54 56 aa11.51□□□□□ -0.57
CDKN1B-201ENST00000228872 KRTAP26-1Q6PEX3 210 aa11.51□□□□□ -0.57
CDKN1B-201ENST00000228872 ETDCA0A1B0GVM5 59 aa11.5□□□□□ -0.57
CDKN1B-201ENST00000228872 KCNQ1DNQ9H478 68 aa11.5□□□□□ -0.57
CDKN1B-201ENST00000228872 C15orf56Q8N910 161 aa11.5□□□□□ -0.57
CDKN1B-201ENST00000228872 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.48□□□□□ -0.57
CDKN1B-201ENST00000228872 DSCR10P59022 87 aa11.48□□□□□ -0.57
CDKN1B-201ENST00000228872 PSPHP1O15172 72 aa11.46□□□□□ -0.57
CDKN1B-201ENST00000228872 SPART-AS1P0CW21 52 aa11.46□□□□□ -0.57
CDKN1B-201ENST00000228872 TNP2Q05952 138 aa11.46□□□□□ -0.57
CDKN1B-201ENST00000228872 PMAIP1Q13794 54 aa11.46□□□□□ -0.57
CDKN1B-201ENST00000228872 C1orf137Q5JT78 98 aa11.46□□□□□ -0.57
CDKN1B-201ENST00000228872 Q8NBF4 154 aa11.46□□□□□ -0.57
CDKN1B-201ENST00000228872 CYP4F30PQ9H0H9 118 aa11.46□□□□□ -0.58
CDKN1B-201ENST00000228872 COL6A5A8TX70 2615 aa11.46□□□□□ -0.58
CDKN1B-201ENST00000228872 TRAV22A0A0B4J277 110 aa11.45□□□□□ -0.58
CDKN1B-201ENST00000228872 C7orf33Q8WU49 177 aa11.45□□□□□ -0.58
CDKN1B-201ENST00000228872 K7EQZ3 153 aa11.45□□□□□ -0.58
CDKN1B-201ENST00000228872 WFDC10BQ8IUB3 73 aa11.45□□□□□ -0.58
CDKN1B-201ENST00000228872 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
CDKN1B-201ENST00000228872 SERTAD4-AS1Q5TG53 156 aa11.44□□□□□ -0.58
CDKN1B-201ENST00000228872 ST20-AS1Q8NBB2 130 aa11.44□□□□□ -0.58
CDKN1B-201ENST00000228872 PRR4Q16378 134 aa11.43□□□□□ -0.58
CDKN1B-201ENST00000228872 DHRS4-AS1Q9P1J3 65 aa11.43□□□□□ -0.58
CDKN1B-201ENST00000228872 SPRR4Q96PI1 79 aa11.42□□□□□ -0.58
CDKN1B-201ENST00000228872 MDFIQ99750 246 aa11.42□□□□□ -0.58
CDKN1B-201ENST00000228872 Q9BRP9 147 aa11.41□□□□□ -0.58
CDKN1B-201ENST00000228872 Q6ZRX8 168 aa11.41□□□□□ -0.58
CDKN1B-201ENST00000228872 PSCAO43653 123 aa11.4□□□□□ -0.59
CDKN1B-201ENST00000228872 HCG22E2RYF7 251 aa11.39□□□□□ -0.59
CDKN1B-201ENST00000228872 RETNQ9HD89 108 aa11.39□□□□□ -0.59
CDKN1B-201ENST00000228872 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
CDKN1B-201ENST00000228872 KRTAP4-16G5E9R7 235 aaPredicted RBP11.37□□□□□ -0.59
CDKN1B-201ENST00000228872 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
CDKN1B-201ENST00000228872 TENM3Q9P273 2699 aa11.36□□□□□ -0.59
CDKN1B-201ENST00000228872 A8MUN3 132 aa11.35□□□□□ -0.59
CDKN1B-201ENST00000228872 NDUFB1O75438 58 aa11.34□□□□□ -0.59
CDKN1B-201ENST00000228872 PRB2P02812 416 aaPredicted RBP11.34□□□□□ -0.59
CDKN1B-201ENST00000228872 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
CDKN1B-201ENST00000228872 SPRR1AP35321 89 aa11.32□□□□□ -0.6
CDKN1B-201ENST00000228872 K7EIL1 84 aa11.32□□□□□ -0.6
CDKN1B-201ENST00000228872 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
CDKN1B-201ENST00000228872 IGKV2D-24A0A075B6R9 120 aa11.31□□□□□ -0.6
CDKN1B-201ENST00000228872 PLA2G2DQ9UNK4 145 aa11.3□□□□□ -0.6
CDKN1B-201ENST00000228872 Q5VV11 94 aa11.29□□□□□ -0.6
CDKN1B-201ENST00000228872 FAM168BA1KXE4 195 aa11.29□□□□□ -0.6
CDKN1B-201ENST00000228872 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
CDKN1B-201ENST00000228872 A8MU10 97 aa11.28□□□□□ -0.6
CDKN1B-201ENST00000228872 MP68P56378 58 aa11.28□□□□□ -0.6
CDKN1B-201ENST00000228872 WFDC13Q8IUB5 93 aa11.28□□□□□ -0.6
CDKN1B-201ENST00000228872 LINC00476Q8WZB0 136 aa11.27□□□□□ -0.61
CDKN1B-201ENST00000228872 IGLV5-37A0A075B6J1 123 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms