RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 A0A1B0GW54 56 aa10.16□□□□□ -0.78
NDFIP2-201ENST00000218652 LITAFQ99732 161 aa10.16□□□□□ -0.78
NDFIP2-201ENST00000218652 TRBV7-4A0A0J9YYF1 115 aa10.16□□□□□ -0.78
NDFIP2-201ENST00000218652 NOTCH1P46531 2555 aa10.16□□□□□ -0.78
NDFIP2-201ENST00000218652 EPM2AB3EWF7 344 aa10.15□□□□□ -0.78
NDFIP2-201ENST00000218652 EIF4EBP3O60516 100 aaPredicted RBP10.15□□□□□ -0.78
NDFIP2-201ENST00000218652 BAHCC1Q9P281 2608 aa10.15□□□□□ -0.79
NDFIP2-201ENST00000218652 SERTAD4-AS1Q5TG53 156 aa10.14□□□□□ -0.79
NDFIP2-201ENST00000218652 CHTF8P0CG12 524 aa10.14□□□□□ -0.79
NDFIP2-201ENST00000218652 CHD6Q8TD26 2715 aa10.12□□□□□ -0.79
NDFIP2-201ENST00000218652 Q6ZRP5 223 aa10.12□□□□□ -0.79
NDFIP2-201ENST00000218652 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
NDFIP2-201ENST00000218652 H3BPC8 53 aa10.11□□□□□ -0.79
NDFIP2-201ENST00000218652 A8MUN3 132 aa10.1□□□□□ -0.79
NDFIP2-201ENST00000218652 H3BNG1 76 aa10.09□□□□□ -0.79
NDFIP2-201ENST00000218652 VPREB1P12018 145 aa10.09□□□□□ -0.79
NDFIP2-201ENST00000218652 LINC00313P59037 77 aa10.08□□□□□ -0.8
NDFIP2-201ENST00000218652 K7EQZ3 153 aa10.08□□□□□ -0.8
NDFIP2-201ENST00000218652 Q8NAQ8 132 aa10.08□□□□□ -0.8
NDFIP2-201ENST00000218652 LINC00588Q9Y4M8 146 aa10.07□□□□□ -0.8
NDFIP2-201ENST00000218652 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
NDFIP2-201ENST00000218652 TEP1Q99973 2627 aaKnown RBP10.06□□□□□ -0.8
NDFIP2-201ENST00000218652 C16orf90A8MZG2 172 aa10.06□□□□□ -0.8
NDFIP2-201ENST00000218652 FAM168BA1KXE4 195 aa10.05□□□□□ -0.8
NDFIP2-201ENST00000218652 IGLV6-57P01721 117 aa10.05□□□□□ -0.8
NDFIP2-201ENST00000218652 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
NDFIP2-201ENST00000218652 LINC01600Q96MT4 127 aa10.03□□□□□ -0.8
NDFIP2-201ENST00000218652 HELZ2Q9BYK8 2649 aaKnown RBP10.03□□□□□ -0.8
NDFIP2-201ENST00000218652 CFAP46Q8IYW2 2715 aa10.03□□□□□ -0.8
NDFIP2-201ENST00000218652 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
NDFIP2-201ENST00000218652 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
NDFIP2-201ENST00000218652 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
NDFIP2-201ENST00000218652 RTL8CO15255 209 aa10.02□□□□□ -0.81
NDFIP2-201ENST00000218652 KRTAP24-1Q3LI83 254 aa10.01□□□□□ -0.81
NDFIP2-201ENST00000218652 PLA2G1BP04054 148 aaKnown RBP10□□□□□ -0.81
NDFIP2-201ENST00000218652 A8MWP4 228 aa10□□□□□ -0.81
NDFIP2-201ENST00000218652 Q96NJ1 140 aa9.99□□□□□ -0.81
NDFIP2-201ENST00000218652 COA5Q86WW8 74 aa9.98□□□□□ -0.81
NDFIP2-201ENST00000218652 LOC101927531A0A1B0GV80 90 aa9.98□□□□□ -0.81
NDFIP2-201ENST00000218652 LINC00528Q8N1L1 170 aa9.98□□□□□ -0.81
NDFIP2-201ENST00000218652 MRPL34Q9BQ48 92 aaKnown RBP9.97□□□□□ -0.81
NDFIP2-201ENST00000218652 FAM229AH3BQW9 127 aa9.97□□□□□ -0.81
NDFIP2-201ENST00000218652 MAP1AP78559 2803 aaPredicted RBP9.96□□□□□ -0.81
NDFIP2-201ENST00000218652 A0A0G2JQZ4 141 aa9.96□□□□□ -0.81
NDFIP2-201ENST00000218652 A0A1W2PNN7 141 aa9.96□□□□□ -0.81
NDFIP2-201ENST00000218652 FREM2Q5SZK8 3169 aa9.96□□□□□ -0.82
NDFIP2-201ENST00000218652 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.82
NDFIP2-201ENST00000218652 STAB2Q8WWQ8 2551 aa9.95□□□□□ -0.82
NDFIP2-201ENST00000218652 DMDP11532 3685 aa9.95□□□□□ -0.82
NDFIP2-201ENST00000218652 SSBP3-AS1Q7Z2R9 100 aa9.95□□□□□ -0.82
NDFIP2-201ENST00000218652 DNAH10OSP0CZ25 163 aa9.94□□□□□ -0.82
NDFIP2-201ENST00000218652 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
NDFIP2-201ENST00000218652 TEX15Q9BXT5 2789 aa9.94□□□□□ -0.82
NDFIP2-201ENST00000218652 COL27A1Q8IZC6 1860 aaPredicted RBP9.94□□□□□ -0.82
NDFIP2-201ENST00000218652 IGLV1-50A0A075B6I6 118 aa9.93□□□□□ -0.82
NDFIP2-201ENST00000218652 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
NDFIP2-201ENST00000218652 KLKP1Q107X0 134 aa9.93□□□□□ -0.82
NDFIP2-201ENST00000218652 LINC00336Q6ZUF6 198 aa9.93□□□□□ -0.82
NDFIP2-201ENST00000218652 KLK9Q2XQG4 91 aa9.93□□□□□ -0.82
NDFIP2-201ENST00000218652 IGFL1Q6UW32 110 aa9.92□□□□□ -0.82
NDFIP2-201ENST00000218652 UQCR11O14957 56 aa9.92□□□□□ -0.82
NDFIP2-201ENST00000218652 WDFY3Q8IZQ1 3526 aa9.91□□□□□ -0.82
NDFIP2-201ENST00000218652 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
NDFIP2-201ENST00000218652 Q8N377 158 aa9.91□□□□□ -0.82
NDFIP2-201ENST00000218652 CSNK1G2-AS1Q8NCQ2 148 aa9.9□□□□□ -0.82
NDFIP2-201ENST00000218652 PRR15Q8IV56 129 aa9.9□□□□□ -0.82
NDFIP2-201ENST00000218652 CYP4F30PQ9H0H9 118 aa9.9□□□□□ -0.83
NDFIP2-201ENST00000218652 H7BZZ5 65 aa9.88□□□□□ -0.83
NDFIP2-201ENST00000218652 CR1P17927 2039 aa9.87□□□□□ -0.83
NDFIP2-201ENST00000218652 C9orf129Q5T035 196 aaKnown RBP9.87□□□□□ -0.83
NDFIP2-201ENST00000218652 TNRC18O15417 2968 aaPredicted RBP9.87□□□□□ -0.83
NDFIP2-201ENST00000218652 UNC79Q9P2D8 2635 aa9.86□□□□□ -0.83
NDFIP2-201ENST00000218652 C8orf17Q9NRJ1 99 aa9.86□□□□□ -0.83
NDFIP2-201ENST00000218652 PRR34Q9NV39 138 aa9.86□□□□□ -0.83
NDFIP2-201ENST00000218652 DSCR10P59022 87 aa9.85□□□□□ -0.83
NDFIP2-201ENST00000218652 C15orf56Q8N910 161 aa9.84□□□□□ -0.83
NDFIP2-201ENST00000218652 GIG44P09565 113 aaPredicted RBP9.83□□□□□ -0.84
NDFIP2-201ENST00000218652 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
NDFIP2-201ENST00000218652 ZNF575Q86XF7 245 aa9.81□□□□□ -0.84
NDFIP2-201ENST00000218652 MIR22HGQ0VDD5 57 aa9.8□□□□□ -0.84
NDFIP2-201ENST00000218652 APLNQ9ULZ1 77 aa9.79□□□□□ -0.84
NDFIP2-201ENST00000218652 DMBT1Q9UGM3 2413 aaPredicted RBP9.79□□□□□ -0.84
NDFIP2-201ENST00000218652 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
NDFIP2-201ENST00000218652 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
NDFIP2-201ENST00000218652 FRYQ5TBA9 3013 aa9.79□□□□□ -0.84
NDFIP2-201ENST00000218652 C19orf73Q9NVV2 129 aa9.78□□□□□ -0.84
NDFIP2-201ENST00000218652 ZNF861PO60384 105 aa9.77□□□□□ -0.85
NDFIP2-201ENST00000218652 A0A1W2PNM2 257 aa9.76□□□□□ -0.85
NDFIP2-201ENST00000218652 PCSK5Q92824 1860 aa9.76□□□□□ -0.85
NDFIP2-201ENST00000218652 ASPMQ8IZT6 3477 aa9.75□□□□□ -0.85
NDFIP2-201ENST00000218652 CRIPTQ9P021 101 aa9.75□□□□□ -0.85
NDFIP2-201ENST00000218652 NBEAQ8NFP9 2946 aa9.74□□□□□ -0.85
NDFIP2-201ENST00000218652 LOC400499M0QZD8 3231 aa9.73□□□□□ -0.85
NDFIP2-201ENST00000218652 C9orf163Q8N9P6 203 aa9.73□□□□□ -0.85
NDFIP2-201ENST00000218652 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
NDFIP2-201ENST00000218652 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
NDFIP2-201ENST00000218652 WIPF1O43516 503 aa9.73□□□□□ -0.85
NDFIP2-201ENST00000218652 K7EIL1 84 aa9.72□□□□□ -0.85
NDFIP2-201ENST00000218652 WWC2-AS2Q96NR7 200 aa9.71□□□□□ -0.85
NDFIP2-201ENST00000218652 KRTAP10-11P60412 298 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms