RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 P01791 123 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr211Q8VGH2 309 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Fxyd4Q9D2W0 88 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Cend1Q9JKC6 149 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr1192-ps1A0A1L1SRD7 309 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 P01783 136 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Myod1P10085 318 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 G0s2Q61585 103 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr16Q62007 309 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr1256Q8VGP1 306 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 Trbv31A0A075B5J5 111 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Defa30E9QPZ2 93 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 P18526 117 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Plp1P60202 277 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Rnf182Q8C432 247 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 GlmpQ9JHJ3 404 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 IcosQ9WVS0 200 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 CrebbpP45481 2441 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Nav2E9Q842 2432 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Trdv2-1A0A0G2JGB9 116 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 SstP60041 116 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Trdv2-2Q5R1A4 116 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ly6g5bQ8K1T4 194 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Chchd5Q9CQP3 110 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 3100002H09RikQ9CXW6 140 aa10.63□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm5426J3QNM7 103 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 P0C913 63 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ccl11P48298 97 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 CampP51437 172 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Dnajc30P59041 219 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Trav6-2Q5R1I4 113 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm9958Q8C9U4 106 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm26566Q8CAC1 153 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Rnf114Q9ET26 229 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Nat6Q9R123 314 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Med12A2AGH6 2190 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Trav6d-7A0A075B6B0 112 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Cxcl13O55038 109 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 P0C1Z5 52 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Dtx1Q61010 627 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm15294V9GXA7 121 aa10.62□□□□□ -0.71
Nup88-201ENSMUST00000035283 Lama5Q61001 3718 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm28778A0A087WSK7 233 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm15217A2CG07 155 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm21983D6RFS9 131 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 LtaP09225 202 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ppp1r3cQ7TMB3 317 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Fam206aQ80ZQ9 193 aaKnown RBP10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Tctex1d2Q9CQ66 144 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Malsu1Q9CWV0 228 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Hyls1Q9CXX0 307 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Zfp983E9PUT0 460 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gsx1P31315 261 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Tmem88bQ3TYP4 173 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm10190Q8BSD7 107 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 MturnQ8CGA4 131 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr1330Q8VEY6 315 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Mrpl20Q9CQL4 149 aa10.61□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ighv6-7A0A0A6YWU3 119 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 Trbv26A0A0B4J1P5 115 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 CrxO54751 299 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 TfpiO54819 306 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ormdl3Q9CPZ6 153 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 Tspo2Q9CRZ8 162 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 Crybb3Q9JJU9 211 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ighv5-9A0A075B5Q2 117 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm45521A0A1B0GRK0 198 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 OtosQ8R448 89 aa10.6□□□□□ -0.71
Nup88-201ENSMUST00000035283 Tmem29A2ANF5 204 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm16442D3YZG3 307 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr1185-ps1F6XP16 303 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Col8a1Q00780 744 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr1437Q7TQR7 312 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 4930474N05RikQ8BVR5 218 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Olfr975Q8VG91 310 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 PpdpfQ9CR37 115 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Tppp3Q9CRB6 176 aaKnown RBP10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Slc25a39Q9D8K8 359 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Tex48Q9DA81 110 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Npc2Q9Z0J0 149 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Rnf5O35445 180 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 P04944 107 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ttc9cQ810A3 171 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 EppinQ9DA01 134 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Ovol1Q9WTJ2 267 aa10.59□□□□□ -0.71
Nup88-201ENSMUST00000035283 Gm17660B9UIU9 90 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 NpsP0C0P8 89 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Defa9P50707 93 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Cacng7P62956 275 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Tm4sf20Q9CQY8 226 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Tctex1d1Q9D5I4 173 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Josd1Q9DBJ6 202 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Itgb1bp1O35671 200 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 F2rl1P55086 399 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Znhit3Q9CQK1 151 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Osr1Q9WVG7 266 aa10.58□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ncor1Q60974 2453 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Ighv9-1A0A0B4J1P3 117 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Mamld1P0C6A2 803 aa10.57□□□□□ -0.72
Nup88-201ENSMUST00000035283 Mfge8P21956 463 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 113 ms