RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 COL27A1Q8IZC6 1860 aaPredicted RBP10.18□□□□□ -0.78
HNRNPU-226ENST00000640218 C6orf48Q9UBA6 75 aa10.18□□□□□ -0.78
HNRNPU-226ENST00000640218 IGKV2D-30A0A075B6S6 120 aa10.17□□□□□ -0.78
HNRNPU-226ENST00000640218 IGKV2-30P06310 120 aa10.17□□□□□ -0.78
HNRNPU-226ENST00000640218 CXCL6P80162 114 aa10.17□□□□□ -0.78
HNRNPU-226ENST00000640218 C1orf64Q8NEQ6 169 aa10.16□□□□□ -0.78
HNRNPU-226ENST00000640218 SPATA3Q8NHX4 192 aa10.16□□□□□ -0.78
HNRNPU-226ENST00000640218 USP9XQ93008 2570 aaPredicted RBP10.16□□□□□ -0.78
HNRNPU-226ENST00000640218 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
HNRNPU-226ENST00000640218 MOBPQ13875 183 aa10.16□□□□□ -0.78
HNRNPU-226ENST00000640218 SMIM29Q86T20 159 aa10.15□□□□□ -0.78
HNRNPU-226ENST00000640218 Q9UF83 564 aa10.15□□□□□ -0.79
HNRNPU-226ENST00000640218 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
HNRNPU-226ENST00000640218 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
HNRNPU-226ENST00000640218 CENPFP49454 3210 aa10.12□□□□□ -0.79
HNRNPU-226ENST00000640218 C7orf65Q6ZTY9 151 aa10.11□□□□□ -0.79
HNRNPU-226ENST00000640218 SETD2Q9BYW2 2564 aaPredicted RBP10.11□□□□□ -0.79
HNRNPU-226ENST00000640218 PHF5AQ7RTV0 110 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-226ENST00000640218 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
HNRNPU-226ENST00000640218 ANKRD11Q6UB99 2663 aaPredicted RBP10.1□□□□□ -0.79
HNRNPU-226ENST00000640218 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
HNRNPU-226ENST00000640218 COL4A2P08572 1712 aa10.1□□□□□ -0.79
HNRNPU-226ENST00000640218 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
HNRNPU-226ENST00000640218 FAM218AQ96MZ4 157 aa10.09□□□□□ -0.79
HNRNPU-226ENST00000640218 H3BNG1 76 aa10.08□□□□□ -0.8
HNRNPU-226ENST00000640218 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
HNRNPU-226ENST00000640218 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
HNRNPU-226ENST00000640218 RTL8CO15255 209 aa10.05□□□□□ -0.8
HNRNPU-226ENST00000640218 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
HNRNPU-226ENST00000640218 SMCPP49901 116 aaPredicted RBP10.04□□□□□ -0.8
HNRNPU-226ENST00000640218 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
HNRNPU-226ENST00000640218 LINC00476Q8WZB0 136 aa10.03□□□□□ -0.8
HNRNPU-226ENST00000640218 TP53AIP1Q9HCN2 124 aa10.02□□□□□ -0.8
HNRNPU-226ENST00000640218 Q8NAQ8 132 aa10.02□□□□□ -0.81
HNRNPU-226ENST00000640218 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.81
HNRNPU-226ENST00000640218 Q6ZRX8 168 aa10.02□□□□□ -0.81
HNRNPU-226ENST00000640218 USP9YO00507 2555 aaPredicted RBP10.02□□□□□ -0.81
HNRNPU-226ENST00000640218 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
HNRNPU-226ENST00000640218 EPM2AB3EWF7 344 aa10.02□□□□□ -0.81
HNRNPU-226ENST00000640218 ST20-AS1Q8NBB2 130 aa10.01□□□□□ -0.81
HNRNPU-226ENST00000640218 CEP295Q9C0D2 2601 aa10.01□□□□□ -0.81
HNRNPU-226ENST00000640218 PKD1L2Q7Z442 2459 aa10□□□□□ -0.81
HNRNPU-226ENST00000640218 A0A1B0GU69 56 aa10□□□□□ -0.81
HNRNPU-226ENST00000640218 Q6ZQT0 140 aa10□□□□□ -0.81
HNRNPU-226ENST00000640218 ACYP2P14621 99 aa9.99□□□□□ -0.81
HNRNPU-226ENST00000640218 PCSK5Q92824 1860 aa9.98□□□□□ -0.81
HNRNPU-226ENST00000640218 LINC00313P59037 77 aa9.98□□□□□ -0.81
HNRNPU-226ENST00000640218 Q6ZRP5 223 aa9.98□□□□□ -0.81
HNRNPU-226ENST00000640218 Q8NBF4 154 aa9.98□□□□□ -0.81
HNRNPU-226ENST00000640218 GVQW2A0A096LPI5 108 aaPredicted RBP9.95□□□□□ -0.82
HNRNPU-226ENST00000640218 A0A1B0GW54 56 aa9.95□□□□□ -0.82
HNRNPU-226ENST00000640218 PRO0461Q9UI25 63 aa9.95□□□□□ -0.82
HNRNPU-226ENST00000640218 LOC110117498A0A087WWA1 95 aa9.94□□□□□ -0.82
HNRNPU-226ENST00000640218 SPAG11AQ6PDA7 123 aa9.94□□□□□ -0.82
HNRNPU-226ENST00000640218 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
HNRNPU-226ENST00000640218 ANKRD17O75179 2603 aaKnown RBP9.93□□□□□ -0.82
HNRNPU-226ENST00000640218 FAM168BA1KXE4 195 aa9.92□□□□□ -0.82
HNRNPU-226ENST00000640218 BCE1O60756 84 aa9.92□□□□□ -0.82
HNRNPU-226ENST00000640218 CHD8Q9HCK8 2581 aa9.91□□□□□ -0.82
HNRNPU-226ENST00000640218 PCNTO95613 3336 aa9.9□□□□□ -0.82
HNRNPU-226ENST00000640218 TRAV22A0A0B4J277 110 aa9.89□□□□□ -0.83
HNRNPU-226ENST00000640218 DNAH10OSP0CZ25 163 aa9.89□□□□□ -0.83
HNRNPU-226ENST00000640218 Q96NJ1 140 aa9.89□□□□□ -0.83
HNRNPU-226ENST00000640218 MTORP42345 2549 aa9.89□□□□□ -0.83
HNRNPU-226ENST00000640218 SERTAD4-AS1Q5TG53 156 aa9.89□□□□□ -0.83
HNRNPU-226ENST00000640218 TM2D3Q9BRN9 247 aa9.89□□□□□ -0.83
HNRNPU-226ENST00000640218 VPREB1P12018 145 aa9.87□□□□□ -0.83
HNRNPU-226ENST00000640218 ATP11AUNQ6ZP68 121 aa9.86□□□□□ -0.83
HNRNPU-226ENST00000640218 LITAFQ99732 161 aa9.86□□□□□ -0.83
HNRNPU-226ENST00000640218 H3BPC8 53 aa9.86□□□□□ -0.83
HNRNPU-226ENST00000640218 IGLV8-61A0A075B6I0 122 aa9.86□□□□□ -0.83
HNRNPU-226ENST00000640218 IGLV6-57P01721 117 aa9.86□□□□□ -0.83
HNRNPU-226ENST00000640218 UTRNP46939 3433 aa9.84□□□□□ -0.83
HNRNPU-226ENST00000640218 KLK9Q2XQG4 91 aa9.84□□□□□ -0.83
HNRNPU-226ENST00000640218 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
HNRNPU-226ENST00000640218 POLQO75417 2590 aa9.83□□□□□ -0.84
HNRNPU-226ENST00000640218 C4orf26Q17RF5 130 aa9.83□□□□□ -0.84
HNRNPU-226ENST00000640218 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
HNRNPU-226ENST00000640218 BPTFQ12830 3046 aa9.82□□□□□ -0.84
HNRNPU-226ENST00000640218 M0R2T5 61 aa9.81□□□□□ -0.84
HNRNPU-226ENST00000640218 ACANP16112 2415 aa9.81□□□□□ -0.84
HNRNPU-226ENST00000640218 K7EIL1 84 aa9.8□□□□□ -0.84
HNRNPU-226ENST00000640218 C9orf92A6NGG3 77 aa9.8□□□□□ -0.84
HNRNPU-226ENST00000640218 KRTAP10-11P60412 298 aa9.8□□□□□ -0.84
HNRNPU-226ENST00000640218 A8MWP4 228 aa9.8□□□□□ -0.84
HNRNPU-226ENST00000640218 PRO0628Q9UI54 55 aa9.8□□□□□ -0.84
HNRNPU-226ENST00000640218 IGLV1-50A0A075B6I6 118 aa9.8□□□□□ -0.84
HNRNPU-226ENST00000640218 K7EQZ3 153 aa9.8□□□□□ -0.84
HNRNPU-226ENST00000640218 FASNP49327 2511 aaKnown RBP9.79□□□□□ -0.84
HNRNPU-226ENST00000640218 MRPL34Q9BQ48 92 aaKnown RBP9.76□□□□□ -0.85
HNRNPU-226ENST00000640218 C8orf87E5RJ46 101 aa9.76□□□□□ -0.85
HNRNPU-226ENST00000640218 KCNQ1DNQ9H478 68 aa9.76□□□□□ -0.85
HNRNPU-226ENST00000640218 LOC101927531A0A1B0GV80 90 aa9.75□□□□□ -0.85
HNRNPU-226ENST00000640218 F8P00451 2351 aa9.75□□□□□ -0.85
HNRNPU-226ENST00000640218 RPS28P62857 69 aaKnown RBP9.74□□□□□ -0.85
HNRNPU-226ENST00000640218 C15orf56Q8N910 161 aa9.73□□□□□ -0.85
HNRNPU-226ENST00000640218 IGFL1Q6UW32 110 aa9.72□□□□□ -0.85
HNRNPU-226ENST00000640218 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-226ENST00000640218 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
HNRNPU-226ENST00000640218 DSCR10P59022 87 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms