RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 PGPEP1Q9NXJ5 209 aa13.31□□□□□ -0.28
SCARB2-219ENST00000639738 A0A096LNI7 61 aa13.3□□□□□ -0.28
SCARB2-219ENST00000639738 PCP4L1A6NKN8 68 aa13.3□□□□□ -0.28
SCARB2-219ENST00000639738 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
SCARB2-219ENST00000639738 XAGE1AQ9HD64 81 aa13.3□□□□□ -0.28
SCARB2-219ENST00000639738 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
SCARB2-219ENST00000639738 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
SCARB2-219ENST00000639738 C16orf90A8MZG2 172 aa13.29□□□□□ -0.28
SCARB2-219ENST00000639738 GCSHP23434 173 aa13.29□□□□□ -0.28
SCARB2-219ENST00000639738 FXYD2P54710 66 aa13.28□□□□□ -0.28
SCARB2-219ENST00000639738 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
SCARB2-219ENST00000639738 PKHD1P08F94 4074 aa13.27□□□□□ -0.28
SCARB2-219ENST00000639738 PANO1I0J062 215 aa13.27□□□□□ -0.29
SCARB2-219ENST00000639738 BVES-AS1Q5T3Y7 98 aa13.27□□□□□ -0.29
SCARB2-219ENST00000639738 KRTAP7-1Q8IUC3 87 aa13.26□□□□□ -0.29
SCARB2-219ENST00000639738 A4D1N5 150 aa13.24□□□□□ -0.29
SCARB2-219ENST00000639738 CHTF8P0CG12 524 aa13.24□□□□□ -0.29
SCARB2-219ENST00000639738 HINT1P49773 126 aaPredicted RBP13.23□□□□□ -0.29
SCARB2-219ENST00000639738 PLA2G2DQ9UNK4 145 aa13.23□□□□□ -0.29
SCARB2-219ENST00000639738 PKIGQ9Y2B9 76 aa13.23□□□□□ -0.29
SCARB2-219ENST00000639738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.23□□□□□ -0.29
SCARB2-219ENST00000639738 VPREB1P12018 145 aa13.22□□□□□ -0.29
SCARB2-219ENST00000639738 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
SCARB2-219ENST00000639738 DYNC1H1Q14204 4646 aaKnown RBP13.22□□□□□ -0.29
SCARB2-219ENST00000639738 COPS9Q8WXC6 57 aa13.22□□□□□ -0.29
SCARB2-219ENST00000639738 IGKV2-28A0A075B6P5 120 aa13.21□□□□□ -0.29
SCARB2-219ENST00000639738 IGKV2-24A0A0C4DH68 120 aa13.21□□□□□ -0.29
SCARB2-219ENST00000639738 FAM168BA1KXE4 195 aa13.21□□□□□ -0.29
SCARB2-219ENST00000639738 NDUFC2O95298 119 aa13.21□□□□□ -0.29
SCARB2-219ENST00000639738 IGKV2D-28P01615 120 aa13.21□□□□□ -0.29
SCARB2-219ENST00000639738 KRTAP10-1P60331 282 aa13.21□□□□□ -0.29
SCARB2-219ENST00000639738 SERTAD4-AS1Q5TG53 156 aa13.21□□□□□ -0.29
SCARB2-219ENST00000639738 EPM2AB3EWF7 344 aa13.2□□□□□ -0.3
SCARB2-219ENST00000639738 PRR3P79522 188 aaKnown RBP13.2□□□□□ -0.3
SCARB2-219ENST00000639738 SPACA4Q8TDM5 124 aa13.2□□□□□ -0.3
SCARB2-219ENST00000639738 HERC2O95714 4834 aa13.2□□□□□ -0.3
SCARB2-219ENST00000639738 A0A1W2PNN7 141 aa13.19□□□□□ -0.3
SCARB2-219ENST00000639738 LRP1BQ9NZR2 4599 aa13.19□□□□□ -0.3
SCARB2-219ENST00000639738 A0A1B0GWB2 263 aa13.18□□□□□ -0.3
SCARB2-219ENST00000639738 M0R143 59 aa13.18□□□□□ -0.3
SCARB2-219ENST00000639738 CFC1BP0CG36 223 aa13.18□□□□□ -0.3
SCARB2-219ENST00000639738 CFC1P0CG37 223 aa13.18□□□□□ -0.3
SCARB2-219ENST00000639738 SNHG12Q9BXW3 62 aa13.18□□□□□ -0.3
SCARB2-219ENST00000639738 IGLV5-37A0A075B6J1 123 aa13.18□□□□□ -0.3
SCARB2-219ENST00000639738 Q6ZSA8 131 aa13.17□□□□□ -0.3
SCARB2-219ENST00000639738 FAM30AQ9NZY2 134 aa13.17□□□□□ -0.3
SCARB2-219ENST00000639738 LINC00474Q9P2X8 69 aa13.17□□□□□ -0.3
SCARB2-219ENST00000639738 KIAA1109Q2LD37 5005 aa13.17□□□□□ -0.3
SCARB2-219ENST00000639738 LINC00337Q8N6G1 96 aa13.15□□□□□ -0.3
SCARB2-219ENST00000639738 KRTAP17-1Q9BYP8 105 aa13.14□□□□□ -0.31
SCARB2-219ENST00000639738 TMEM238LA0A1B0GVL6 79 aa13.13□□□□□ -0.31
SCARB2-219ENST00000639738 A6NJY4 79 aa13.13□□□□□ -0.31
SCARB2-219ENST00000639738 NHP2Q9NX24 153 aaKnown RBP13.13□□□□□ -0.31
SCARB2-219ENST00000639738 A0A0B4J2C4 111 aa13.13□□□□□ -0.31
SCARB2-219ENST00000639738 TRBV10-2A0A0K0K1G8 114 aa13.13□□□□□ -0.31
SCARB2-219ENST00000639738 NCR3O14931 201 aa13.11□□□□□ -0.31
SCARB2-219ENST00000639738 FAM19A5Q7Z5A7 132 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-219ENST00000639738 C22orf24Q9Y442 160 aa13.11□□□□□ -0.31
SCARB2-219ENST00000639738 A0A087WYN8 130 aa13.1□□□□□ -0.31
SCARB2-219ENST00000639738 K7ERJ3 54 aa13.1□□□□□ -0.31
SCARB2-219ENST00000639738 BATFQ16520 125 aa13.1□□□□□ -0.31
SCARB2-219ENST00000639738 PLAC8Q9NZF1 115 aa13.1□□□□□ -0.31
SCARB2-219ENST00000639738 M0R378 163 aa13.09□□□□□ -0.31
SCARB2-219ENST00000639738 C7orf33Q8WU49 177 aa13.08□□□□□ -0.31
SCARB2-219ENST00000639738 IGLV6-57P01721 117 aa13.08□□□□□ -0.32
SCARB2-219ENST00000639738 PCLOQ9Y6V0 5065 aa13.07□□□□□ -0.32
SCARB2-219ENST00000639738 A6NDN8 102 aa13.07□□□□□ -0.32
SCARB2-219ENST00000639738 PRO1854Q9UHT4 67 aa13.06□□□□□ -0.32
SCARB2-219ENST00000639738 TRAV13-2A0A0B4J235 113 aa13.05□□□□□ -0.32
SCARB2-219ENST00000639738 MRPL55Q7Z7F7 128 aaKnown RBP13.05□□□□□ -0.32
SCARB2-219ENST00000639738 NKAPP1Q8N9T2 125 aa13.05□□□□□ -0.32
SCARB2-219ENST00000639738 LINC00167Q96N53 147 aa13.05□□□□□ -0.32
SCARB2-219ENST00000639738 APOBP04114 4563 aaKnown RBP13.05□□□□□ -0.32
SCARB2-219ENST00000639738 M0QXV9 152 aa13.04□□□□□ -0.32
SCARB2-219ENST00000639738 RAB37Q96AX2 223 aa13.04□□□□□ -0.32
SCARB2-219ENST00000639738 TRBV10-3A0A0K0K1G6 114 aa13.03□□□□□ -0.32
SCARB2-219ENST00000639738 PHF5AQ7RTV0 110 aaKnown RBP13.03□□□□□ -0.32
SCARB2-219ENST00000639738 CIRBP-AS1Q8TBR5 109 aa13.03□□□□□ -0.32
SCARB2-219ENST00000639738 DPH3Q96FX2 82 aa13.03□□□□□ -0.32
SCARB2-219ENST00000639738 KRTAP11-1Q8IUC1 163 aa13.03□□□□□ -0.32
SCARB2-219ENST00000639738 IGLV1-50A0A075B6I6 118 aa13.02□□□□□ -0.33
SCARB2-219ENST00000639738 GAGE10A6NGK3 116 aa13.02□□□□□ -0.33
SCARB2-219ENST00000639738 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
SCARB2-219ENST00000639738 SCXQ7RTU7 201 aa13.02□□□□□ -0.33
SCARB2-219ENST00000639738 TMEM126AQ9H061 195 aa13.02□□□□□ -0.33
SCARB2-219ENST00000639738 TAX1BP3O14907 124 aa13.01□□□□□ -0.33
SCARB2-219ENST00000639738 OR13C6PQ8NH95 151 aa13□□□□□ -0.33
SCARB2-219ENST00000639738 TSPAN13O95857 204 aa12.98□□□□□ -0.33
SCARB2-219ENST00000639738 LBHQ53QV2 105 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-219ENST00000639738 COL5A1-AS1Q5SY13 56 aa12.98□□□□□ -0.33
SCARB2-219ENST00000639738 S100A7L2Q5SY68 101 aa12.98□□□□□ -0.33
SCARB2-219ENST00000639738 KCNQ1DNQ9H478 68 aa12.98□□□□□ -0.33
SCARB2-219ENST00000639738 RPL37AP8A6NKH3 93 aa12.98□□□□□ -0.33
SCARB2-219ENST00000639738 SMIM11BQ8TCY0 68 aa12.98□□□□□ -0.33
SCARB2-219ENST00000639738 XGP55808 180 aa12.97□□□□□ -0.33
SCARB2-219ENST00000639738 HAMPP81172 84 aa12.97□□□□□ -0.33
SCARB2-219ENST00000639738 H7C2G1 150 aa12.95□□□□□ -0.34
SCARB2-219ENST00000639738 RPL28P46779 137 aaKnown RBP12.94□□□□□ -0.34
SCARB2-219ENST00000639738 TRAV23DV6A0A075B6W5 121 aa12.93□□□□□ -0.34
SCARB2-219ENST00000639738 KRTAP4-16G5E9R7 235 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms