RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 CHTOPQ9Y3Y2 248 aaKnown RBP9.64□□□□□ -0.87
COLCA2-207ENST00000639470 UBE2AP49459 152 aa9.63□□□□□ -0.87
COLCA2-207ENST00000639470 FAM19A2Q8N3H0 131 aa9.62□□□□□ -0.87
COLCA2-207ENST00000639470 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
COLCA2-207ENST00000639470 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
COLCA2-207ENST00000639470 TMEM223A0PJW6 202 aa9.6□□□□□ -0.87
COLCA2-207ENST00000639470 M0R378 163 aa9.6□□□□□ -0.87
COLCA2-207ENST00000639470 TRGC2P03986 189 aa9.6□□□□□ -0.87
COLCA2-207ENST00000639470 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
COLCA2-207ENST00000639470 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
COLCA2-207ENST00000639470 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
COLCA2-207ENST00000639470 LINC00310P59036 64 aa9.59□□□□□ -0.87
COLCA2-207ENST00000639470 FAM19A1Q7Z5A9 133 aa9.59□□□□□ -0.87
COLCA2-207ENST00000639470 CRYGAP11844 174 aa9.58□□□□□ -0.88
COLCA2-207ENST00000639470 LINC00158P58513 81 aa9.58□□□□□ -0.88
COLCA2-207ENST00000639470 H0Y8G0 127 aa9.57□□□□□ -0.88
COLCA2-207ENST00000639470 CHCHD1Q96BP2 118 aaKnown RBP9.57□□□□□ -0.88
COLCA2-207ENST00000639470 SMIM13P0DJ93 91 aa9.56□□□□□ -0.88
COLCA2-207ENST00000639470 COX17Q14061 63 aa9.56□□□□□ -0.88
COLCA2-207ENST00000639470 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
COLCA2-207ENST00000639470 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
COLCA2-207ENST00000639470 TSPEAR-AS2P59090 65 aa9.55□□□□□ -0.88
COLCA2-207ENST00000639470 RPL24P83731 157 aaKnown RBP9.54□□□□□ -0.88
COLCA2-207ENST00000639470 NCR3O14931 201 aa9.53□□□□□ -0.88
COLCA2-207ENST00000639470 SERF1AO75920 110 aa9.53□□□□□ -0.88
COLCA2-207ENST00000639470 C3orf22Q8N5N4 141 aa9.53□□□□□ -0.88
COLCA2-207ENST00000639470 HSBP1O75506 76 aa9.52□□□□□ -0.89
COLCA2-207ENST00000639470 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
COLCA2-207ENST00000639470 PLEKHB2Q96CS7 222 aa9.51□□□□□ -0.89
COLCA2-207ENST00000639470 PMCHL2Q9BQD1 86 aa9.51□□□□□ -0.89
COLCA2-207ENST00000639470 HIGD2AQ9BW72 106 aa9.51□□□□□ -0.89
COLCA2-207ENST00000639470 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
COLCA2-207ENST00000639470 BOD1L2Q8IYS8 172 aa9.5□□□□□ -0.89
COLCA2-207ENST00000639470 DAND5Q8N907 189 aa9.5□□□□□ -0.89
COLCA2-207ENST00000639470 NDUFA12Q9UI09 145 aa9.49□□□□□ -0.89
COLCA2-207ENST00000639470 FABP4P15090 132 aa9.48□□□□□ -0.89
COLCA2-207ENST00000639470 FAM229BQ4G0N7 80 aa9.48□□□□□ -0.89
COLCA2-207ENST00000639470 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
COLCA2-207ENST00000639470 SFTA2Q6UW10 78 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
COLCA2-207ENST00000639470 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.9
COLCA2-207ENST00000639470 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
COLCA2-207ENST00000639470 SPRR4Q96PI1 79 aa9.45□□□□□ -0.9
COLCA2-207ENST00000639470 TRBV10-3A0A0K0K1G6 114 aa9.44□□□□□ -0.9
COLCA2-207ENST00000639470 HERV-K104P63124 156 aa9.43□□□□□ -0.9
COLCA2-207ENST00000639470 PPDPFQ9H3Y8 114 aa9.43□□□□□ -0.9
COLCA2-207ENST00000639470 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
COLCA2-207ENST00000639470 LEPROTO15243 131 aa9.42□□□□□ -0.9
COLCA2-207ENST00000639470 EIF4EBP3O60516 100 aaPredicted RBP9.42□□□□□ -0.9
COLCA2-207ENST00000639470 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
COLCA2-207ENST00000639470 PRYO14603 147 aa9.41□□□□□ -0.9
COLCA2-207ENST00000639470 SPRR1AP35321 89 aa9.41□□□□□ -0.9
COLCA2-207ENST00000639470 J3QQQ9 107 aa9.4□□□□□ -0.9
COLCA2-207ENST00000639470 ERC2-IT1O76042 136 aa9.4□□□□□ -0.9
COLCA2-207ENST00000639470 SMCR5Q8TEV8 140 aa9.4□□□□□ -0.9
COLCA2-207ENST00000639470 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.9
COLCA2-207ENST00000639470 DPM2O94777 84 aa9.39□□□□□ -0.91
COLCA2-207ENST00000639470 COA6Q5JTJ3 125 aaKnown RBP9.39□□□□□ -0.91
COLCA2-207ENST00000639470 NPC2P61916 151 aa9.38□□□□□ -0.91
COLCA2-207ENST00000639470 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
COLCA2-207ENST00000639470 MUC2Q02817 5179 aa9.37□□□□□ -0.91
COLCA2-207ENST00000639470 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
COLCA2-207ENST00000639470 IGKCP01834 107 aa9.37□□□□□ -0.91
COLCA2-207ENST00000639470 PLNP26678 52 aa9.37□□□□□ -0.91
COLCA2-207ENST00000639470 LINC00337Q8N6G1 96 aa9.37□□□□□ -0.91
COLCA2-207ENST00000639470 HSPB8Q9UJY1 196 aa9.37□□□□□ -0.91
COLCA2-207ENST00000639470 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
COLCA2-207ENST00000639470 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
COLCA2-207ENST00000639470 B5MCH6 92 aa9.35□□□□□ -0.91
COLCA2-207ENST00000639470 LGALS3P17931 250 aaKnown RBP9.35□□□□□ -0.91
COLCA2-207ENST00000639470 Q8NBF4 154 aa9.35□□□□□ -0.91
COLCA2-207ENST00000639470 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
COLCA2-207ENST00000639470 DDTP30046 118 aa9.34□□□□□ -0.91
COLCA2-207ENST00000639470 Q9BRP9 147 aa9.34□□□□□ -0.91
COLCA2-207ENST00000639470 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
COLCA2-207ENST00000639470 HERVK_113P61574 105 aa9.33□□□□□ -0.92
COLCA2-207ENST00000639470 GAGE2AQ6NT46 116 aa9.33□□□□□ -0.92
COLCA2-207ENST00000639470 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
COLCA2-207ENST00000639470 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
COLCA2-207ENST00000639470 LINC00587B1AMM8 73 aa9.32□□□□□ -0.92
COLCA2-207ENST00000639470 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
COLCA2-207ENST00000639470 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
COLCA2-207ENST00000639470 IGLV9-49A0A0B4J1Y8 123 aa9.3□□□□□ -0.92
COLCA2-207ENST00000639470 LINC00483Q53H64 154 aa9.3□□□□□ -0.92
COLCA2-207ENST00000639470 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 E9PLD3 99 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 SYS1-DBNDD2H3BUS1 97 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 S100A6P06703 90 aa9.29□□□□□ -0.92
COLCA2-207ENST00000639470 NMUP48645 174 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms