RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 BPTFQ12830 3046 aa11.56□□□□□ -0.56
CACNA1A-258ENST00000638029 RPL37AP61513 92 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-258ENST00000638029 PHF5AQ7RTV0 110 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-258ENST00000638029 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
CACNA1A-258ENST00000638029 ABCA12Q86UK0 2595 aa11.55□□□□□ -0.56
CACNA1A-258ENST00000638029 CDIP1Q9H305 208 aa11.54□□□□□ -0.56
CACNA1A-258ENST00000638029 CENPFP49454 3210 aa11.54□□□□□ -0.56
CACNA1A-258ENST00000638029 ADAMTSL4-AS1Q5T5F5 129 aa11.54□□□□□ -0.56
CACNA1A-258ENST00000638029 CRIP3Q6Q6R5 217 aa11.54□□□□□ -0.56
CACNA1A-258ENST00000638029 RTL8CO15255 209 aa11.53□□□□□ -0.56
CACNA1A-258ENST00000638029 IGF2RP11717 2491 aa11.52□□□□□ -0.56
CACNA1A-258ENST00000638029 IGIPA6NJ69 53 aa11.51□□□□□ -0.57
CACNA1A-258ENST00000638029 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
CACNA1A-258ENST00000638029 SMIM1B2RUZ4 78 aa11.5□□□□□ -0.57
CACNA1A-258ENST00000638029 CHCHD7Q9BUK0 85 aa11.49□□□□□ -0.57
CACNA1A-258ENST00000638029 IGLV1-51P01701 117 aa11.49□□□□□ -0.57
CACNA1A-258ENST00000638029 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
CACNA1A-258ENST00000638029 Q6ZSN1 163 aa11.49□□□□□ -0.57
CACNA1A-258ENST00000638029 SMR3BP02814 79 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-258ENST00000638029 IGLV6-57P01721 117 aa11.47□□□□□ -0.57
CACNA1A-258ENST00000638029 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
CACNA1A-258ENST00000638029 C9orf129Q5T035 196 aaKnown RBP11.46□□□□□ -0.58
CACNA1A-258ENST00000638029 CRIPTQ9P021 101 aa11.45□□□□□ -0.58
CACNA1A-258ENST00000638029 A0A0D9SG42 100 aa11.44□□□□□ -0.58
CACNA1A-258ENST00000638029 FAM19A4Q96LR4 140 aa11.44□□□□□ -0.58
CACNA1A-258ENST00000638029 F8WDY8 70 aa11.44□□□□□ -0.58
CACNA1A-258ENST00000638029 M0R2T5 61 aa11.43□□□□□ -0.58
CACNA1A-258ENST00000638029 ZNF462Q96JM2 2506 aa11.42□□□□□ -0.58
CACNA1A-258ENST00000638029 USP9XQ93008 2570 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-258ENST00000638029 C16orf95Q9H693 158 aa11.41□□□□□ -0.58
CACNA1A-258ENST00000638029 SETD2Q9BYW2 2564 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-258ENST00000638029 PKD1L2Q7Z442 2459 aa11.4□□□□□ -0.58
CACNA1A-258ENST00000638029 LINC00315P59091 139 aa11.4□□□□□ -0.58
CACNA1A-258ENST00000638029 Q6ZRP5 223 aa11.39□□□□□ -0.59
CACNA1A-258ENST00000638029 A0A1B0GUV1 79 aa11.38□□□□□ -0.59
CACNA1A-258ENST00000638029 Q8N2B8 174 aa11.38□□□□□ -0.59
CACNA1A-258ENST00000638029 LINC01600Q96MT4 127 aa11.37□□□□□ -0.59
CACNA1A-258ENST00000638029 LINC00167Q96N53 147 aa11.36□□□□□ -0.59
CACNA1A-258ENST00000638029 NCOR2Q9Y618 2525 aa11.35□□□□□ -0.59
CACNA1A-258ENST00000638029 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
CACNA1A-258ENST00000638029 AMELXQ99217 191 aa11.33□□□□□ -0.6
CACNA1A-258ENST00000638029 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
CACNA1A-258ENST00000638029 PRO3102Q9H379 93 aa11.31□□□□□ -0.6
CACNA1A-258ENST00000638029 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
CACNA1A-258ENST00000638029 IGLV5-37A0A075B6J1 123 aa11.31□□□□□ -0.6
CACNA1A-258ENST00000638029 EPM2AB3EWF7 344 aa11.31□□□□□ -0.6
CACNA1A-258ENST00000638029 WWC2-AS2Q96NR7 200 aa11.31□□□□□ -0.6
CACNA1A-258ENST00000638029 URB1-AS1Q96HZ7 61 aa11.3□□□□□ -0.6
CACNA1A-258ENST00000638029 TM2D3Q9BRN9 247 aa11.3□□□□□ -0.6
CACNA1A-258ENST00000638029 ST20-AS1Q8NBB2 130 aa11.3□□□□□ -0.6
CACNA1A-258ENST00000638029 TP53AIP1Q9HCN2 124 aa11.3□□□□□ -0.6
CACNA1A-258ENST00000638029 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
CACNA1A-258ENST00000638029 UTRNP46939 3433 aa11.29□□□□□ -0.6
CACNA1A-258ENST00000638029 OBSCN-AS1Q96MR7 158 aa11.29□□□□□ -0.6
CACNA1A-258ENST00000638029 CSNK1G2-AS1Q8NCQ2 148 aa11.29□□□□□ -0.6
CACNA1A-258ENST00000638029 LINC00476Q8WZB0 136 aa11.29□□□□□ -0.6
CACNA1A-258ENST00000638029 LINC00310P59036 64 aa11.29□□□□□ -0.6
CACNA1A-258ENST00000638029 LINC01561Q8N1V8 128 aa11.28□□□□□ -0.6
CACNA1A-258ENST00000638029 RPS28P62857 69 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-258ENST00000638029 K7EQZ3 153 aa11.27□□□□□ -0.61
CACNA1A-258ENST00000638029 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-258ENST00000638029 DSCR10P59022 87 aa11.26□□□□□ -0.61
CACNA1A-258ENST00000638029 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
CACNA1A-258ENST00000638029 NBDYA0A0U1RRE5 68 aa11.26□□□□□ -0.61
CACNA1A-258ENST00000638029 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
CACNA1A-258ENST00000638029 A8MUN3 132 aa11.24□□□□□ -0.61
CACNA1A-258ENST00000638029 FAM168BA1KXE4 195 aa11.24□□□□□ -0.61
CACNA1A-258ENST00000638029 Q8NBF4 154 aa11.23□□□□□ -0.61
CACNA1A-258ENST00000638029 USP24Q9UPU5 2620 aa11.2□□□□□ -0.62
CACNA1A-258ENST00000638029 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
CACNA1A-258ENST00000638029 KRTAP24-1Q3LI83 254 aa11.19□□□□□ -0.62
CACNA1A-258ENST00000638029 COA5Q86WW8 74 aa11.19□□□□□ -0.62
CACNA1A-258ENST00000638029 LINC00304Q8N9R0 145 aa11.19□□□□□ -0.62
CACNA1A-258ENST00000638029 MIR22HGQ0VDD5 57 aa11.18□□□□□ -0.62
CACNA1A-258ENST00000638029 LUZP6Q538Z0 58 aa11.18□□□□□ -0.62
CACNA1A-258ENST00000638029 Q6ZQT0 140 aa11.17□□□□□ -0.62
CACNA1A-258ENST00000638029 A0A1W2PPR1 153 aa11.16□□□□□ -0.62
CACNA1A-258ENST00000638029 CD164Q04900 197 aa11.15□□□□□ -0.62
CACNA1A-258ENST00000638029 LINC00588Q9Y4M8 146 aa11.15□□□□□ -0.63
CACNA1A-258ENST00000638029 UQCR11O14957 56 aa11.15□□□□□ -0.63
CACNA1A-258ENST00000638029 FAM218AQ96MZ4 157 aa11.15□□□□□ -0.63
CACNA1A-258ENST00000638029 POLQO75417 2590 aa11.14□□□□□ -0.63
CACNA1A-258ENST00000638029 COX8CQ7Z4L0 72 aa11.13□□□□□ -0.63
CACNA1A-258ENST00000638029 DNAH12Q6ZR08 3092 aa11.13□□□□□ -0.63
CACNA1A-258ENST00000638029 BCE1O60756 84 aa11.13□□□□□ -0.63
CACNA1A-258ENST00000638029 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-258ENST00000638029 WIPF1O43516 503 aa11.12□□□□□ -0.63
CACNA1A-258ENST00000638029 DNAH10OSP0CZ25 163 aa11.12□□□□□ -0.63
CACNA1A-258ENST00000638029 MTORP42345 2549 aa11.11□□□□□ -0.63
CACNA1A-258ENST00000638029 KTN1-AS1Q86SY8 53 aa11.11□□□□□ -0.63
CACNA1A-258ENST00000638029 ANAPC11Q9NYG5 84 aa11.11□□□□□ -0.63
CACNA1A-258ENST00000638029 IGLV5-48A0A075B6I7 105 aa11.11□□□□□ -0.63
CACNA1A-258ENST00000638029 A0A096LNJ9 63 aa11.09□□□□□ -0.63
CACNA1A-258ENST00000638029 COL4A2P08572 1712 aa11.09□□□□□ -0.63
CACNA1A-258ENST00000638029 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
CACNA1A-258ENST00000638029 PRRC2CQ9Y520 2896 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-258ENST00000638029 TRBV7-4A0A0J9YYF1 115 aa11.08□□□□□ -0.64
CACNA1A-258ENST00000638029 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
CACNA1A-258ENST00000638029 A0A0G2JQZ4 141 aa11.05□□□□□ -0.64
CACNA1A-258ENST00000638029 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms