RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
CLN6-219ENST00000637329 WFDC2Q14508 124 aa10.01□□□□□ -0.81
CLN6-219ENST00000637329 C1orf134Q5TEV5 83 aa10□□□□□ -0.81
CLN6-219ENST00000637329 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
CLN6-219ENST00000637329 DNAH10Q8IVF4 4471 aa9.99□□□□□ -0.81
CLN6-219ENST00000637329 TRAV13-2A0A0B4J235 113 aa9.99□□□□□ -0.81
CLN6-219ENST00000637329 SLPIP03973 132 aa9.99□□□□□ -0.81
CLN6-219ENST00000637329 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
CLN6-219ENST00000637329 KMT2AQ03164 3969 aa9.97□□□□□ -0.81
CLN6-219ENST00000637329 TSPAN13O95857 204 aa9.97□□□□□ -0.81
CLN6-219ENST00000637329 IGKV2-28A0A075B6P5 120 aa9.96□□□□□ -0.82
CLN6-219ENST00000637329 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
CLN6-219ENST00000637329 IGKV2D-28P01615 120 aa9.96□□□□□ -0.82
CLN6-219ENST00000637329 RPL13AP40429 203 aaKnown RBP9.96□□□□□ -0.82
CLN6-219ENST00000637329 Q6ZRP5 223 aa9.96□□□□□ -0.82
CLN6-219ENST00000637329 Q8N814 137 aa9.96□□□□□ -0.82
CLN6-219ENST00000637329 A0A087WTM6 91 aa9.95□□□□□ -0.82
CLN6-219ENST00000637329 A0A1B0GV90 55 aa9.95□□□□□ -0.82
CLN6-219ENST00000637329 A0A1W2PPM0 123 aa9.95□□□□□ -0.82
CLN6-219ENST00000637329 H3BUT2 72 aa9.95□□□□□ -0.82
CLN6-219ENST00000637329 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
CLN6-219ENST00000637329 LYRM7Q5U5X0 104 aa9.95□□□□□ -0.82
CLN6-219ENST00000637329 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
CLN6-219ENST00000637329 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
CLN6-219ENST00000637329 FABP2P12104 132 aa9.93□□□□□ -0.82
CLN6-219ENST00000637329 Q1RN00 199 aa9.93□□□□□ -0.82
CLN6-219ENST00000637329 LINC00337Q8N6G1 96 aa9.93□□□□□ -0.82
CLN6-219ENST00000637329 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
CLN6-219ENST00000637329 PLA2G2DQ9UNK4 145 aa9.92□□□□□ -0.82
CLN6-219ENST00000637329 DNAH2Q9P225 4427 aa9.91□□□□□ -0.82
CLN6-219ENST00000637329 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.91□□□□□ -0.82
CLN6-219ENST00000637329 GAGE2EQ4V326 116 aa9.91□□□□□ -0.82
CLN6-219ENST00000637329 GAGE2DQ9UEU5 116 aa9.91□□□□□ -0.82
CLN6-219ENST00000637329 VPREB1P12018 145 aa9.9□□□□□ -0.82
CLN6-219ENST00000637329 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
CLN6-219ENST00000637329 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
CLN6-219ENST00000637329 Q8NDZ9 215 aa9.9□□□□□ -0.82
CLN6-219ENST00000637329 NAA38Q9BRA0 125 aaKnown RBP9.9□□□□□ -0.82
CLN6-219ENST00000637329 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
CLN6-219ENST00000637329 H7C2G1 150 aa9.89□□□□□ -0.83
CLN6-219ENST00000637329 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
CLN6-219ENST00000637329 IGLV5-37A0A075B6J1 123 aa9.88□□□□□ -0.83
CLN6-219ENST00000637329 NCR3O14931 201 aa9.88□□□□□ -0.83
CLN6-219ENST00000637329 PSMB2P49721 201 aa9.88□□□□□ -0.83
CLN6-219ENST00000637329 VAMP3Q15836 100 aa9.88□□□□□ -0.83
CLN6-219ENST00000637329 TRIAP1O43715 76 aa9.87□□□□□ -0.83
CLN6-219ENST00000637329 COX6CP09669 75 aa9.87□□□□□ -0.83
CLN6-219ENST00000637329 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
CLN6-219ENST00000637329 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
CLN6-219ENST00000637329 CBY1Q9Y3M2 126 aa9.87□□□□□ -0.83
CLN6-219ENST00000637329 K7EP34 96 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 M0R378 163 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 IGLV6-57P01721 117 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 GTF2H5Q6ZYL4 71 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 LINC00474Q9P2X8 69 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
CLN6-219ENST00000637329 TRBV20-1A0A075B6N2 111 aa9.85□□□□□ -0.83
CLN6-219ENST00000637329 RTL8CO15255 209 aa9.85□□□□□ -0.83
CLN6-219ENST00000637329 NKAPP1Q8N9T2 125 aa9.85□□□□□ -0.83
CLN6-219ENST00000637329 A0A096LNI7 61 aa9.84□□□□□ -0.83
CLN6-219ENST00000637329 PRR3P79522 188 aaKnown RBP9.84□□□□□ -0.83
CLN6-219ENST00000637329 DNAH17Q9UFH2 4485 aa9.84□□□□□ -0.83
CLN6-219ENST00000637329 GAGE10A6NGK3 116 aa9.83□□□□□ -0.84
CLN6-219ENST00000637329 SMIM11BQ8TCY0 68 aa9.83□□□□□ -0.84
CLN6-219ENST00000637329 HECTD4Q9Y4D8 3996 aa9.83□□□□□ -0.84
CLN6-219ENST00000637329 SCGB1C2P0DMR2 95 aa9.82□□□□□ -0.84
CLN6-219ENST00000637329 TNP2Q05952 138 aa9.82□□□□□ -0.84
CLN6-219ENST00000637329 SERTAD4-AS1Q5TG53 156 aa9.82□□□□□ -0.84
CLN6-219ENST00000637329 UBE2V1Q13404 147 aa9.81□□□□□ -0.84
CLN6-219ENST00000637329 SDIM1Q6ZPB5 146 aa9.81□□□□□ -0.84
CLN6-219ENST00000637329 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
CLN6-219ENST00000637329 TRBV10-3A0A0K0K1G6 114 aa9.8□□□□□ -0.84
CLN6-219ENST00000637329 KIAA1109Q2LD37 5005 aa9.79□□□□□ -0.84
CLN6-219ENST00000637329 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
CLN6-219ENST00000637329 IGKV2-24A0A0C4DH68 120 aa9.79□□□□□ -0.84
CLN6-219ENST00000637329 H0YGX0 51 aa9.78□□□□□ -0.84
CLN6-219ENST00000637329 TCL1BO95988 128 aa9.78□□□□□ -0.84
CLN6-219ENST00000637329 ATXN8Q156A1 80 aa9.78□□□□□ -0.84
CLN6-219ENST00000637329 FAM19A5Q7Z5A7 132 aaPredicted RBP9.78□□□□□ -0.84
CLN6-219ENST00000637329 FAM168BA1KXE4 195 aa9.77□□□□□ -0.85
CLN6-219ENST00000637329 LST1O00453 97 aa9.77□□□□□ -0.85
CLN6-219ENST00000637329 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
CLN6-219ENST00000637329 C7orf33Q8WU49 177 aa9.77□□□□□ -0.85
CLN6-219ENST00000637329 TRBV7-6A0A0J9YX20 115 aa9.76□□□□□ -0.85
CLN6-219ENST00000637329 M0QXV9 152 aa9.76□□□□□ -0.85
CLN6-219ENST00000637329 MRPL55Q7Z7F7 128 aaKnown RBP9.76□□□□□ -0.85
CLN6-219ENST00000637329 KRTAP7-1Q8IUC3 87 aa9.76□□□□□ -0.85
CLN6-219ENST00000637329 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
CLN6-219ENST00000637329 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
CLN6-219ENST00000637329 C22orf24Q9Y442 160 aa9.76□□□□□ -0.85
CLN6-219ENST00000637329 KCNQ1DNQ9H478 68 aa9.75□□□□□ -0.85
CLN6-219ENST00000637329 H3BMG7 143 aa9.74□□□□□ -0.85
CLN6-219ENST00000637329 PRYO14603 147 aa9.74□□□□□ -0.85
CLN6-219ENST00000637329 ZNF73O43830 326 aaPredicted RBP9.74□□□□□ -0.85
CLN6-219ENST00000637329 CHTF8P0CG12 524 aa9.74□□□□□ -0.85
CLN6-219ENST00000637329 LINC01620Q4KN68 170 aa9.74□□□□□ -0.85
CLN6-219ENST00000637329 C6orf99Q4VX62 202 aa9.74□□□□□ -0.85
CLN6-219ENST00000637329 FAT2Q9NYQ8 4349 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms