RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 Q6ZPA2 131 aa9.38□□□□□ -0.91
SYNGAP1-208ENST00000629380 FHL2Q14192 279 aa9.38□□□□□ -0.91
SYNGAP1-208ENST00000629380 FLNAP21333 2647 aaKnown RBP9.37□□□□□ -0.91
SYNGAP1-208ENST00000629380 ADAMTSL4-AS1Q5T5F5 129 aa9.37□□□□□ -0.91
SYNGAP1-208ENST00000629380 NBEAL1Q6ZS30 2694 aa9.36□□□□□ -0.91
SYNGAP1-208ENST00000629380 EDN2P20800 178 aa9.35□□□□□ -0.91
SYNGAP1-208ENST00000629380 ODF3L2Q3SX64 289 aa9.35□□□□□ -0.91
SYNGAP1-208ENST00000629380 BCE1O60756 84 aa9.35□□□□□ -0.91
SYNGAP1-208ENST00000629380 COX8CQ7Z4L0 72 aa9.34□□□□□ -0.91
SYNGAP1-208ENST00000629380 SPINT4Q6UDR6 99 aa9.33□□□□□ -0.92
SYNGAP1-208ENST00000629380 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
SYNGAP1-208ENST00000629380 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
SYNGAP1-208ENST00000629380 ATP11AUNQ6ZP68 121 aa9.33□□□□□ -0.92
SYNGAP1-208ENST00000629380 PRM2P04554 102 aa9.32□□□□□ -0.92
SYNGAP1-208ENST00000629380 SMR3AQ99954 134 aa9.32□□□□□ -0.92
SYNGAP1-208ENST00000629380 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
SYNGAP1-208ENST00000629380 CRIP3Q6Q6R5 217 aa9.32□□□□□ -0.92
SYNGAP1-208ENST00000629380 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
SYNGAP1-208ENST00000629380 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
SYNGAP1-208ENST00000629380 MOBPQ13875 183 aa9.31□□□□□ -0.92
SYNGAP1-208ENST00000629380 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
SYNGAP1-208ENST00000629380 KRTAP10-9P60411 292 aa9.31□□□□□ -0.92
SYNGAP1-208ENST00000629380 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
SYNGAP1-208ENST00000629380 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
SYNGAP1-208ENST00000629380 CDSNQ15517 529 aa9.29□□□□□ -0.92
SYNGAP1-208ENST00000629380 COL4A2P08572 1712 aa9.29□□□□□ -0.92
SYNGAP1-208ENST00000629380 SPACA4Q8TDM5 124 aa9.29□□□□□ -0.92
SYNGAP1-208ENST00000629380 Q8NBF4 154 aa9.28□□□□□ -0.92
SYNGAP1-208ENST00000629380 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
SYNGAP1-208ENST00000629380 STAB1Q9NY15 2570 aa9.27□□□□□ -0.92
SYNGAP1-208ENST00000629380 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.93
SYNGAP1-208ENST00000629380 LOC110117498A0A087WWA1 95 aa9.26□□□□□ -0.93
SYNGAP1-208ENST00000629380 LINC01546A6NGU7 62 aa9.26□□□□□ -0.93
SYNGAP1-208ENST00000629380 LINC00313P59037 77 aa9.26□□□□□ -0.93
SYNGAP1-208ENST00000629380 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
SYNGAP1-208ENST00000629380 AVPP01185 164 aa9.25□□□□□ -0.93
SYNGAP1-208ENST00000629380 IGLV5-39A0A0G2JS06 123 aa9.24□□□□□ -0.93
SYNGAP1-208ENST00000629380 DMBT1Q9UGM3 2413 aaPredicted RBP9.24□□□□□ -0.93
SYNGAP1-208ENST00000629380 FAM229AH3BQW9 127 aa9.24□□□□□ -0.93
SYNGAP1-208ENST00000629380 C22orf24Q9Y442 160 aa9.24□□□□□ -0.93
SYNGAP1-208ENST00000629380 FHL3Q13643 280 aa9.23□□□□□ -0.93
SYNGAP1-208ENST00000629380 A8MTW9 85 aa9.23□□□□□ -0.93
SYNGAP1-208ENST00000629380 SMCR5Q8TEV8 140 aa9.23□□□□□ -0.93
SYNGAP1-208ENST00000629380 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
SYNGAP1-208ENST00000629380 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
SYNGAP1-208ENST00000629380 SPATA3Q8NHX4 192 aa9.22□□□□□ -0.93
SYNGAP1-208ENST00000629380 Q6ZRX8 168 aa9.22□□□□□ -0.93
SYNGAP1-208ENST00000629380 Q9UF83 564 aa9.22□□□□□ -0.93
SYNGAP1-208ENST00000629380 Q6ZRU5 148 aa9.22□□□□□ -0.93
SYNGAP1-208ENST00000629380 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
SYNGAP1-208ENST00000629380 KIF25-AS1Q9Y6Z4 181 aa9.21□□□□□ -0.93
SYNGAP1-208ENST00000629380 Q6ZRP5 223 aa9.2□□□□□ -0.94
SYNGAP1-208ENST00000629380 CRIPTQ9P021 101 aa9.2□□□□□ -0.94
SYNGAP1-208ENST00000629380 LINC00310P59036 64 aa9.19□□□□□ -0.94
SYNGAP1-208ENST00000629380 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
SYNGAP1-208ENST00000629380 ELOF1P60002 83 aaKnown RBP9.19□□□□□ -0.94
SYNGAP1-208ENST00000629380 MDFIQ99750 246 aa9.18□□□□□ -0.94
SYNGAP1-208ENST00000629380 ITPR3Q14573 2671 aa9.18□□□□□ -0.94
SYNGAP1-208ENST00000629380 H3BNG1 76 aa9.17□□□□□ -0.94
SYNGAP1-208ENST00000629380 ERC2-IT1O76042 136 aa9.17□□□□□ -0.94
SYNGAP1-208ENST00000629380 TYMSOSQ8TAI1 123 aa9.17□□□□□ -0.94
SYNGAP1-208ENST00000629380 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
SYNGAP1-208ENST00000629380 Q6ZSN1 163 aa9.16□□□□□ -0.94
SYNGAP1-208ENST00000629380 NOTCH1P46531 2555 aa9.15□□□□□ -0.94
SYNGAP1-208ENST00000629380 CDIP1Q9H305 208 aa9.15□□□□□ -0.95
SYNGAP1-208ENST00000629380 Q6ZQT0 140 aa9.14□□□□□ -0.95
SYNGAP1-208ENST00000629380 CYP4F30PQ9H0H9 118 aa9.14□□□□□ -0.95
SYNGAP1-208ENST00000629380 IGLV8-61A0A075B6I0 122 aa9.13□□□□□ -0.95
SYNGAP1-208ENST00000629380 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
SYNGAP1-208ENST00000629380 LINC00167Q96N53 147 aa9.13□□□□□ -0.95
SYNGAP1-208ENST00000629380 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
SYNGAP1-208ENST00000629380 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
SYNGAP1-208ENST00000629380 IGHV3OR16-9A0A0B4J2B5 98 aa9.12□□□□□ -0.95
SYNGAP1-208ENST00000629380 TRBV7-4A0A0J9YYF1 115 aa9.12□□□□□ -0.95
SYNGAP1-208ENST00000629380 A0A1W2PPR1 153 aa9.11□□□□□ -0.95
SYNGAP1-208ENST00000629380 A8MWP4 228 aa9.11□□□□□ -0.95
SYNGAP1-208ENST00000629380 URB1-AS1Q96HZ7 61 aa9.11□□□□□ -0.95
SYNGAP1-208ENST00000629380 UQCR11O14957 56 aa9.11□□□□□ -0.95
SYNGAP1-208ENST00000629380 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
SYNGAP1-208ENST00000629380 Q96NJ1 140 aa9.1□□□□□ -0.95
SYNGAP1-208ENST00000629380 GVQW2A0A096LPI5 108 aaPredicted RBP9.1□□□□□ -0.95
SYNGAP1-208ENST00000629380 RTL8CO15255 209 aa9.09□□□□□ -0.95
SYNGAP1-208ENST00000629380 C4orf26Q17RF5 130 aa9.09□□□□□ -0.95
SYNGAP1-208ENST00000629380 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
SYNGAP1-208ENST00000629380 A0A096LNJ9 63 aa9.08□□□□□ -0.96
SYNGAP1-208ENST00000629380 COL6A5A8TX70 2615 aa9.07□□□□□ -0.96
SYNGAP1-208ENST00000629380 KMT2BQ9UMN6 2715 aaPredicted RBP9.05□□□□□ -0.96
SYNGAP1-208ENST00000629380 UNC79Q9P2D8 2635 aa9.05□□□□□ -0.96
SYNGAP1-208ENST00000629380 J3QL48 77 aa9.04□□□□□ -0.96
SYNGAP1-208ENST00000629380 COA5Q86WW8 74 aa9.04□□□□□ -0.96
SYNGAP1-208ENST00000629380 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
SYNGAP1-208ENST00000629380 GCN1Q92616 2671 aaKnown RBP9.03□□□□□ -0.96
SYNGAP1-208ENST00000629380 CHTF8P0CG12 524 aa9.03□□□□□ -0.96
SYNGAP1-208ENST00000629380 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
SYNGAP1-208ENST00000629380 RPL37AP61513 92 aaKnown RBP9.03□□□□□ -0.96
SYNGAP1-208ENST00000629380 APLNQ9ULZ1 77 aa9.02□□□□□ -0.97
SYNGAP1-208ENST00000629380 TEX15Q9BXT5 2789 aa9.02□□□□□ -0.97
SYNGAP1-208ENST00000629380 CHD6Q8TD26 2715 aa9.02□□□□□ -0.97
SYNGAP1-208ENST00000629380 TM2D3Q9BRN9 247 aa9.01□□□□□ -0.97
SYNGAP1-208ENST00000629380 MIR22HGQ0VDD5 57 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms