RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SMIM13P0DJ93 91 aa9.27□□□□□ -0.93
PNKP-221ENST00000627317 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
PNKP-221ENST00000627317 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
PNKP-221ENST00000627317 C7orf33Q8WU49 177 aa9.25□□□□□ -0.93
PNKP-221ENST00000627317 SND1-IT1Q9HBX3 110 aa9.25□□□□□ -0.93
PNKP-221ENST00000627317 PLA2G1BP04054 148 aaKnown RBP9.24□□□□□ -0.93
PNKP-221ENST00000627317 TTTY13Q9BZ97 58 aa9.24□□□□□ -0.93
PNKP-221ENST00000627317 A0A0J9YXY3 114 aa9.23□□□□□ -0.93
PNKP-221ENST00000627317 M0QXV9 152 aa9.23□□□□□ -0.93
PNKP-221ENST00000627317 MIR7-3HGQ8N6C7 128 aa9.23□□□□□ -0.93
PNKP-221ENST00000627317 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
PNKP-221ENST00000627317 SERTAD4-AS1Q5TG53 156 aa9.22□□□□□ -0.93
PNKP-221ENST00000627317 PHF5AQ7RTV0 110 aaKnown RBP9.21□□□□□ -0.94
PNKP-221ENST00000627317 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
PNKP-221ENST00000627317 SCGB1D4Q6XE38 83 aa9.2□□□□□ -0.94
PNKP-221ENST00000627317 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
PNKP-221ENST00000627317 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
PNKP-221ENST00000627317 DAND5Q8N907 189 aa9.2□□□□□ -0.94
PNKP-221ENST00000627317 NKAPP1Q8N9T2 125 aa9.2□□□□□ -0.94
PNKP-221ENST00000627317 PLA2G2DQ9UNK4 145 aa9.2□□□□□ -0.94
PNKP-221ENST00000627317 RPL24P83731 157 aaKnown RBP9.19□□□□□ -0.94
PNKP-221ENST00000627317 LRP1Q07954 4544 aaKnown RBP9.18□□□□□ -0.94
PNKP-221ENST00000627317 TIMM17BO60830 172 aa9.18□□□□□ -0.94
PNKP-221ENST00000627317 UBE2BP63146 152 aa9.18□□□□□ -0.94
PNKP-221ENST00000627317 LBHQ53QV2 105 aaPredicted RBP9.18□□□□□ -0.94
PNKP-221ENST00000627317 PKHD1L1Q86WI1 4243 aa9.18□□□□□ -0.94
PNKP-221ENST00000627317 MIEN1Q9BRT3 115 aa9.18□□□□□ -0.94
PNKP-221ENST00000627317 VAMP8Q9BV40 100 aa9.18□□□□□ -0.94
PNKP-221ENST00000627317 TP73-AS1Q9UF72 201 aa9.18□□□□□ -0.94
PNKP-221ENST00000627317 C22orf24Q9Y442 160 aa9.18□□□□□ -0.94
PNKP-221ENST00000627317 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
PNKP-221ENST00000627317 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
PNKP-221ENST00000627317 BOD1L2Q8IYS8 172 aa9.17□□□□□ -0.94
PNKP-221ENST00000627317 PAM16Q9Y3D7 125 aa9.17□□□□□ -0.94
PNKP-221ENST00000627317 TMEM238C9JI98 176 aa9.16□□□□□ -0.94
PNKP-221ENST00000627317 VPREB1P12018 145 aa9.16□□□□□ -0.94
PNKP-221ENST00000627317 PYY3Q5JQD4 70 aa9.16□□□□□ -0.94
PNKP-221ENST00000627317 NPC2P61916 151 aa9.15□□□□□ -0.94
PNKP-221ENST00000627317 SPATA45Q537H7 98 aa9.15□□□□□ -0.94
PNKP-221ENST00000627317 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
PNKP-221ENST00000627317 LITAFQ99732 161 aa9.15□□□□□ -0.94
PNKP-221ENST00000627317 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
PNKP-221ENST00000627317 HNRNPA3P51991 378 aaKnown RBP9.14□□□□□ -0.95
PNKP-221ENST00000627317 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
PNKP-221ENST00000627317 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
PNKP-221ENST00000627317 PRR3P79522 188 aaKnown RBP9.13□□□□□ -0.95
PNKP-221ENST00000627317 Q8NDZ9 215 aa9.13□□□□□ -0.95
PNKP-221ENST00000627317 LOC107984156A0A0G2JMH3 177 aa9.12□□□□□ -0.95
PNKP-221ENST00000627317 COX8AP10176 69 aa9.12□□□□□ -0.95
PNKP-221ENST00000627317 ARL17AQ8IVW1 177 aa9.12□□□□□ -0.95
PNKP-221ENST00000627317 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
PNKP-221ENST00000627317 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
PNKP-221ENST00000627317 NCR3O14931 201 aa9.11□□□□□ -0.95
PNKP-221ENST00000627317 SOSTDC1Q6X4U4 206 aa9.11□□□□□ -0.95
PNKP-221ENST00000627317 LINC00308Q8TCZ7 52 aa9.11□□□□□ -0.95
PNKP-221ENST00000627317 SPANXDQ9BXN6 97 aa9.11□□□□□ -0.95
PNKP-221ENST00000627317 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
PNKP-221ENST00000627317 RPL37AP8A6NKH3 93 aa9.1□□□□□ -0.95
PNKP-221ENST00000627317 M0R378 163 aa9.1□□□□□ -0.95
PNKP-221ENST00000627317 KRTAP11-1Q8IUC1 163 aa9.1□□□□□ -0.95
PNKP-221ENST00000627317 COPS9Q8WXC6 57 aa9.1□□□□□ -0.95
PNKP-221ENST00000627317 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
PNKP-221ENST00000627317 Q6ZVH6 145 aa9.09□□□□□ -0.95
PNKP-221ENST00000627317 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
PNKP-221ENST00000627317 SPANXB1Q9NS25 103 aaPredicted RBP9.09□□□□□ -0.95
PNKP-221ENST00000627317 IGKV2-28A0A075B6P5 120 aa9.08□□□□□ -0.96
PNKP-221ENST00000627317 DLEU1O43261 78 aa9.08□□□□□ -0.96
PNKP-221ENST00000627317 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
PNKP-221ENST00000627317 NDUFC2O95298 119 aa9.08□□□□□ -0.96
PNKP-221ENST00000627317 IGKV2D-28P01615 120 aa9.08□□□□□ -0.96
PNKP-221ENST00000627317 IFITM1P13164 125 aa9.07□□□□□ -0.96
PNKP-221ENST00000627317 S100A12P80511 92 aa9.07□□□□□ -0.96
PNKP-221ENST00000627317 SRSF9Q13242 221 aaKnown RBP eCLIP9.07□□□□□ -0.96
PNKP-221ENST00000627317 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
PNKP-221ENST00000627317 TRBV10-2A0A0K0K1G8 114 aa9.06□□□□□ -0.96
PNKP-221ENST00000627317 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
PNKP-221ENST00000627317 J3QL48 77 aa9.05□□□□□ -0.96
PNKP-221ENST00000627317 OXTP01178 125 aa9.05□□□□□ -0.96
PNKP-221ENST00000627317 S100A7L2Q5SY68 101 aa9.04□□□□□ -0.96
PNKP-221ENST00000627317 MUSTN1Q8IVN3 82 aa9.04□□□□□ -0.96
PNKP-221ENST00000627317 PPDPFQ9H3Y8 114 aa9.04□□□□□ -0.96
PNKP-221ENST00000627317 TRBV10-3A0A0K0K1G6 114 aa9.03□□□□□ -0.96
PNKP-221ENST00000627317 BCE1O60756 84 aa9.03□□□□□ -0.96
PNKP-221ENST00000627317 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
PNKP-221ENST00000627317 SMIM6P0DI80 62 aa9.03□□□□□ -0.96
PNKP-221ENST00000627317 DDTP30046 118 aa9.03□□□□□ -0.96
PNKP-221ENST00000627317 HIST1H4GQ99525 98 aa9.03□□□□□ -0.96
PNKP-221ENST00000627317 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
PNKP-221ENST00000627317 PRYO14603 147 aa9.01□□□□□ -0.97
PNKP-221ENST00000627317 LINC00518Q8N0U6 118 aa9.01□□□□□ -0.97
PNKP-221ENST00000627317 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
PNKP-221ENST00000627317 HIGD1BQ9P298 99 aa9.01□□□□□ -0.97
PNKP-221ENST00000627317 HMCN2Q8NDA2 5059 aa9□□□□□ -0.97
PNKP-221ENST00000627317 LOC105371267A0A1B0GV96 52 aa9□□□□□ -0.97
PNKP-221ENST00000627317 OR13C6PQ8NH95 151 aa9□□□□□ -0.97
PNKP-221ENST00000627317 IGLV6-57P01721 117 aa8.99□□□□□ -0.97
PNKP-221ENST00000627317 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
PNKP-221ENST00000627317 UBE2AP49459 152 aa8.99□□□□□ -0.97
PNKP-221ENST00000627317 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
PNKP-221ENST00000627317 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms