RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 CHCHD1Q96BP2 118 aaKnown RBP14.08□□□□□ -0.16
ATXN3-253ENST00000621269 KRTAP13-2Q52LG2 175 aa14.07□□□□□ -0.16
ATXN3-253ENST00000621269 IGKV2D-26A0A0A0MRZ7 120 aa14.05□□□□□ -0.16
ATXN3-253ENST00000621269 TRAV12-1A0A0B4J245 112 aa14.05□□□□□ -0.16
ATXN3-253ENST00000621269 TMEM223A0PJW6 202 aa14.05□□□□□ -0.16
ATXN3-253ENST00000621269 M0R378 163 aa14.05□□□□□ -0.16
ATXN3-253ENST00000621269 Q8NDZ9 215 aa14.05□□□□□ -0.16
ATXN3-253ENST00000621269 IFI27L1Q96BM0 104 aa14.05□□□□□ -0.16
ATXN3-253ENST00000621269 A0A0U1RRA0 63 aa14.03□□□□□ -0.16
ATXN3-253ENST00000621269 ATP6V1G1O75348 118 aa14.02□□□□□ -0.17
ATXN3-253ENST00000621269 CBLN2Q8IUK8 224 aa14.02□□□□□ -0.17
ATXN3-253ENST00000621269 LINC00304Q8N9R0 145 aa14.02□□□□□ -0.17
ATXN3-253ENST00000621269 YPEL4Q96NS1 127 aa14.01□□□□□ -0.17
ATXN3-253ENST00000621269 PLEKHB2Q96CS7 222 aa13.99□□□□□ -0.17
ATXN3-253ENST00000621269 HIGD2AQ9BW72 106 aa13.98□□□□□ -0.17
ATXN3-253ENST00000621269 HSBP1O75506 76 aa13.97□□□□□ -0.17
ATXN3-253ENST00000621269 SMIM13P0DJ93 91 aa13.97□□□□□ -0.17
ATXN3-253ENST00000621269 MEIG1Q5JSS6 88 aa13.97□□□□□ -0.17
ATXN3-253ENST00000621269 HERV-K104P63124 156 aa13.95□□□□□ -0.18
ATXN3-253ENST00000621269 BOD1L2Q8IYS8 172 aa13.94□□□□□ -0.18
ATXN3-253ENST00000621269 FAM19A2Q8N3H0 131 aa13.94□□□□□ -0.18
ATXN3-253ENST00000621269 RETNLBQ9BQ08 111 aa13.94□□□□□ -0.18
ATXN3-253ENST00000621269 LINC00587B1AMM8 73 aa13.93□□□□□ -0.18
ATXN3-253ENST00000621269 H0Y8G0 127 aa13.92□□□□□ -0.18
ATXN3-253ENST00000621269 MIR7-3HGQ8N6C7 128 aa13.92□□□□□ -0.18
ATXN3-253ENST00000621269 CTAG1AP78358 180 aa13.91□□□□□ -0.18
ATXN3-253ENST00000621269 NDUFA12Q9UI09 145 aa13.91□□□□□ -0.18
ATXN3-253ENST00000621269 MYMXA0A1B0GTQ4 84 aa13.9□□□□□ -0.18
ATXN3-253ENST00000621269 PRYO14603 147 aa13.9□□□□□ -0.18
ATXN3-253ENST00000621269 NCR3O14931 201 aa13.9□□□□□ -0.18
ATXN3-253ENST00000621269 ZNF706Q9Y5V0 76 aaPredicted RBP13.9□□□□□ -0.18
ATXN3-253ENST00000621269 C3orf22Q8N5N4 141 aa13.89□□□□□ -0.19
ATXN3-253ENST00000621269 MAP1LC3CQ9BXW4 147 aa13.89□□□□□ -0.19
ATXN3-253ENST00000621269 SPRR4Q96PI1 79 aa13.88□□□□□ -0.19
ATXN3-253ENST00000621269 A0A0U1RQV1 116 aa13.86□□□□□ -0.19
ATXN3-253ENST00000621269 LEPROTL1O95214 131 aa13.86□□□□□ -0.19
ATXN3-253ENST00000621269 TRGC2P03986 189 aa13.86□□□□□ -0.19
ATXN3-253ENST00000621269 KCNQ1DNQ9H478 68 aa13.86□□□□□ -0.19
ATXN3-253ENST00000621269 MUC2Q02817 5179 aa13.86□□□□□ -0.19
ATXN3-253ENST00000621269 LINC00337Q8N6G1 96 aa13.85□□□□□ -0.19
ATXN3-253ENST00000621269 ETDCA0A1B0GVM5 59 aa13.84□□□□□ -0.19
ATXN3-253ENST00000621269 S100A12P80511 92 aa13.84□□□□□ -0.19
ATXN3-253ENST00000621269 SPAG11AQ6PDA7 123 aa13.84□□□□□ -0.19
ATXN3-253ENST00000621269 IGLV7-46A0A075B6I9 117 aa13.83□□□□□ -0.2
ATXN3-253ENST00000621269 LEPROTO15243 131 aa13.83□□□□□ -0.2
ATXN3-253ENST00000621269 PLNP26678 52 aa13.83□□□□□ -0.2
ATXN3-253ENST00000621269 SERF1AO75920 110 aa13.82□□□□□ -0.2
ATXN3-253ENST00000621269 SPRR1AP35321 89 aa13.82□□□□□ -0.2
ATXN3-253ENST00000621269 CDIP1Q9H305 208 aa13.82□□□□□ -0.2
ATXN3-253ENST00000621269 TRBV10-3A0A0K0K1G6 114 aa13.81□□□□□ -0.2
ATXN3-253ENST00000621269 C4orf48Q5BLP8 95 aa13.81□□□□□ -0.2
ATXN3-253ENST00000621269 SMCR5Q8TEV8 140 aa13.81□□□□□ -0.2
ATXN3-253ENST00000621269 TSPEAR-AS2P59090 65 aa13.8□□□□□ -0.2
ATXN3-253ENST00000621269 TPRXLQ17RH7 258 aa13.8□□□□□ -0.2
ATXN3-253ENST00000621269 HSPB8Q9UJY1 196 aa13.8□□□□□ -0.2
ATXN3-253ENST00000621269 KRTAP4-16G5E9R7 235 aaPredicted RBP13.78□□□□□ -0.2
ATXN3-253ENST00000621269 LINC00310P59036 64 aa13.78□□□□□ -0.2
ATXN3-253ENST00000621269 HERVK_113P61574 105 aa13.78□□□□□ -0.2
ATXN3-253ENST00000621269 DAND5Q8N907 189 aa13.78□□□□□ -0.2
ATXN3-253ENST00000621269 J3QQQ9 107 aa13.77□□□□□ -0.21
ATXN3-253ENST00000621269 DPM2O94777 84 aa13.77□□□□□ -0.21
ATXN3-253ENST00000621269 FABP4P15090 132 aa13.77□□□□□ -0.21
ATXN3-253ENST00000621269 PPDPFQ9H3Y8 114 aa13.77□□□□□ -0.21
ATXN3-253ENST00000621269 LOC107984156A0A0G2JMH3 177 aa13.76□□□□□ -0.21
ATXN3-253ENST00000621269 ARL17AQ8IVW1 177 aa13.76□□□□□ -0.21
ATXN3-253ENST00000621269 NMUP48645 174 aa13.75□□□□□ -0.21
ATXN3-253ENST00000621269 TRBV10-2A0A0K0K1G8 114 aa13.74□□□□□ -0.21
ATXN3-253ENST00000621269 IGKCP01834 107 aa13.74□□□□□ -0.21
ATXN3-253ENST00000621269 LGALS3P17931 250 aaKnown RBP13.74□□□□□ -0.21
ATXN3-253ENST00000621269 DDTP30046 118 aa13.74□□□□□ -0.21
ATXN3-253ENST00000621269 Q8NBF4 154 aa13.74□□□□□ -0.21
ATXN3-253ENST00000621269 PMCHL2Q9BQD1 86 aa13.74□□□□□ -0.21
ATXN3-253ENST00000621269 MIEN1Q9BRT3 115 aa13.74□□□□□ -0.21
ATXN3-253ENST00000621269 B5MCH6 92 aa13.72□□□□□ -0.21
ATXN3-253ENST00000621269 GAGE2AQ6NT46 116 aa13.71□□□□□ -0.21
ATXN3-253ENST00000621269 SPANXB1Q9NS25 103 aaPredicted RBP13.71□□□□□ -0.21
ATXN3-253ENST00000621269 LINC00483Q53H64 154 aa13.7□□□□□ -0.22
ATXN3-253ENST00000621269 S100A7L2Q5SY68 101 aa13.69□□□□□ -0.22
ATXN3-253ENST00000621269 FP248Q71RG6 208 aaPredicted RBP13.69□□□□□ -0.22
ATXN3-253ENST00000621269 NDUFC2O95298 119 aa13.67□□□□□ -0.22
ATXN3-253ENST00000621269 SPINK1P00995 79 aa13.67□□□□□ -0.22
ATXN3-253ENST00000621269 COLCA2A8K830 154 aa13.66□□□□□ -0.22
ATXN3-253ENST00000621269 ERC2-IT1O76042 136 aa13.66□□□□□ -0.22
ATXN3-253ENST00000621269 SLC7A5P1Q8MH63 180 aa13.66□□□□□ -0.22
ATXN3-253ENST00000621269 Q6ZRX8 168 aa13.65□□□□□ -0.22
ATXN3-253ENST00000621269 IGLV9-49A0A0B4J1Y8 123 aa13.64□□□□□ -0.23
ATXN3-253ENST00000621269 IGLV6-57P01721 117 aa13.63□□□□□ -0.23
ATXN3-253ENST00000621269 Q9BRP9 147 aa13.63□□□□□ -0.23
ATXN3-253ENST00000621269 A0A0J9YXY3 114 aa13.62□□□□□ -0.23
ATXN3-253ENST00000621269 NPC2P61916 151 aa13.62□□□□□ -0.23
ATXN3-253ENST00000621269 MOBPQ13875 183 aa13.62□□□□□ -0.23
ATXN3-253ENST00000621269 JOSD1Q15040 202 aaPredicted RBP13.62□□□□□ -0.23
ATXN3-253ENST00000621269 TRAV23DV6A0A075B6W5 121 aa13.61□□□□□ -0.23
ATXN3-253ENST00000621269 SSBP3-AS1Q7Z2R9 100 aa13.61□□□□□ -0.23
ATXN3-253ENST00000621269 E9PLD3 99 aa13.6□□□□□ -0.23
ATXN3-253ENST00000621269 ADAMTSL4-AS1Q5T5F5 129 aa13.59□□□□□ -0.23
ATXN3-253ENST00000621269 SOSTDC1Q6X4U4 206 aa13.58□□□□□ -0.24
ATXN3-253ENST00000621269 ZNF73O43830 326 aaPredicted RBP13.57□□□□□ -0.24
ATXN3-253ENST00000621269 CBY1Q9Y3M2 126 aa13.56□□□□□ -0.24
ATXN3-253ENST00000621269 SYS1-DBNDD2H3BUS1 97 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms