RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 SERF1AO75920 110 aa17.24■□□□□ 0.35
SEMA3B-215ENST00000621029 LEPROTL1O95214 131 aa17.24■□□□□ 0.35
SEMA3B-215ENST00000621029 MEIG1Q5JSS6 88 aa17.23■□□□□ 0.35
SEMA3B-215ENST00000621029 TMEM238C9JI98 176 aa17.22■□□□□ 0.35
SEMA3B-215ENST00000621029 CRYGAP11844 174 aa17.22■□□□□ 0.35
SEMA3B-215ENST00000621029 FAM19A1Q7Z5A9 133 aa17.22■□□□□ 0.35
SEMA3B-215ENST00000621029 Q8NDZ9 215 aa17.22■□□□□ 0.35
SEMA3B-215ENST00000621029 SMIM13P0DJ93 91 aa17.21■□□□□ 0.35
SEMA3B-215ENST00000621029 TMEM126AQ9H061 195 aa17.21■□□□□ 0.35
SEMA3B-215ENST00000621029 PRLHP81277 87 aa17.2■□□□□ 0.34
SEMA3B-215ENST00000621029 KRTAP13-1Q8IUC0 172 aa17.2■□□□□ 0.34
SEMA3B-215ENST00000621029 ANAPC11Q9NYG5 84 aa17.19■□□□□ 0.34
SEMA3B-215ENST00000621029 A0A087X002 238 aa17.18■□□□□ 0.34
SEMA3B-215ENST00000621029 FABP4P15090 132 aa17.18■□□□□ 0.34
SEMA3B-215ENST00000621029 TYMSOSQ8TAI1 123 aa17.18■□□□□ 0.34
SEMA3B-215ENST00000621029 LINC00310P59036 64 aa17.17■□□□□ 0.34
SEMA3B-215ENST00000621029 HERV-K104P63124 156 aa17.17■□□□□ 0.34
SEMA3B-215ENST00000621029 NDUFA12Q9UI09 145 aa17.17■□□□□ 0.34
SEMA3B-215ENST00000621029 HSPB8Q9UJY1 196 aa17.17■□□□□ 0.34
SEMA3B-215ENST00000621029 M0R378 163 aa17.15■□□□□ 0.34
SEMA3B-215ENST00000621029 TSPAN13O95857 204 aa17.15■□□□□ 0.34
SEMA3B-215ENST00000621029 MYMXA0A1B0GTQ4 84 aa17.14■□□□□ 0.33
SEMA3B-215ENST00000621029 COLCA2A8K830 154 aa17.14■□□□□ 0.33
SEMA3B-215ENST00000621029 BOD1L2Q8IYS8 172 aa17.14■□□□□ 0.33
SEMA3B-215ENST00000621029 MIR7-3HGQ8N6C7 128 aa17.14■□□□□ 0.33
SEMA3B-215ENST00000621029 LINC00587B1AMM8 73 aa17.13■□□□□ 0.33
SEMA3B-215ENST00000621029 PLNP26678 52 aa17.13■□□□□ 0.33
SEMA3B-215ENST00000621029 PRR4Q16378 134 aa17.13■□□□□ 0.33
SEMA3B-215ENST00000621029 RNF213Q63HN8 5207 aa17.12■□□□□ 0.33
SEMA3B-215ENST00000621029 MAP1LC3CQ9BXW4 147 aa17.11■□□□□ 0.33
SEMA3B-215ENST00000621029 PMCHL2Q9BQD1 86 aa17.1■□□□□ 0.33
SEMA3B-215ENST00000621029 DPM2O94777 84 aa17.09■□□□□ 0.33
SEMA3B-215ENST00000621029 PLEKHB2Q96CS7 222 aa17.09■□□□□ 0.33
SEMA3B-215ENST00000621029 NCR3O14931 201 aa17.08■□□□□ 0.32
SEMA3B-215ENST00000621029 LEPROTO15243 131 aa17.08■□□□□ 0.32
SEMA3B-215ENST00000621029 HERVK_113P61574 105 aa17.08■□□□□ 0.32
SEMA3B-215ENST00000621029 HIGD2AQ9BW72 106 aa17.07■□□□□ 0.32
SEMA3B-215ENST00000621029 TSPEAR-AS2P59090 65 aa17.06■□□□□ 0.32
SEMA3B-215ENST00000621029 FAM229BQ4G0N7 80 aa17.06■□□□□ 0.32
SEMA3B-215ENST00000621029 IGKV2D-26A0A0A0MRZ7 120 aa17.05■□□□□ 0.32
SEMA3B-215ENST00000621029 IGKCP01834 107 aa17.04■□□□□ 0.32
SEMA3B-215ENST00000621029 KRTAP13-2Q52LG2 175 aa17.04■□□□□ 0.32
SEMA3B-215ENST00000621029 J3QQQ9 107 aa17.03■□□□□ 0.32
SEMA3B-215ENST00000621029 LGALS3P17931 250 aaKnown RBP17.02■□□□□ 0.32
SEMA3B-215ENST00000621029 DAND5Q8N907 189 aa17.01■□□□□ 0.31
SEMA3B-215ENST00000621029 PRYO14603 147 aa17■□□□□ 0.31
SEMA3B-215ENST00000621029 LPAP08519 4548 aa16.99■□□□□ 0.31
SEMA3B-215ENST00000621029 NMUP48645 174 aa16.97■□□□□ 0.31
SEMA3B-215ENST00000621029 S100A12P80511 92 aa16.96■□□□□ 0.31
SEMA3B-215ENST00000621029 LINC00304Q8N9R0 145 aa16.96■□□□□ 0.31
SEMA3B-215ENST00000621029 TRBV10-3A0A0K0K1G6 114 aa16.95■□□□□ 0.3
SEMA3B-215ENST00000621029 ETDCA0A1B0GVM5 59 aa16.95■□□□□ 0.3
SEMA3B-215ENST00000621029 MIEN1Q9BRT3 115 aa16.95■□□□□ 0.3
SEMA3B-215ENST00000621029 KCNQ1DNQ9H478 68 aa16.94■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BKO60814 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BJP06899 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BOP23527 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BBP33778 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BDP58876 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BCP62807 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST2H2BEQ16778 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 LINC00337Q8N6G1 96 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BHQ93079 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BNQ99877 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 HIST1H2BMQ99879 126 aa16.92■□□□□ 0.3
SEMA3B-215ENST00000621029 ZNF706Q9Y5V0 76 aaPredicted RBP16.91■□□□□ 0.3
SEMA3B-215ENST00000621029 SPRR4Q96PI1 79 aa16.9■□□□□ 0.3
SEMA3B-215ENST00000621029 SYS1-DBNDD2H3BUS1 97 aa16.88■□□□□ 0.29
SEMA3B-215ENST00000621029 SPRR1AP35321 89 aa16.88■□□□□ 0.29
SEMA3B-215ENST00000621029 C3orf22Q8N5N4 141 aa16.88■□□□□ 0.29
SEMA3B-215ENST00000621029 LOC107984156A0A0G2JMH3 177 aa16.87■□□□□ 0.29
SEMA3B-215ENST00000621029 DDTP30046 118 aa16.87■□□□□ 0.29
SEMA3B-215ENST00000621029 ARL17AQ8IVW1 177 aa16.87■□□□□ 0.29
SEMA3B-215ENST00000621029 SMCR5Q8TEV8 140 aa16.86■□□□□ 0.29
SEMA3B-215ENST00000621029 TRBV10-2A0A0K0K1G8 114 aa16.85■□□□□ 0.29
SEMA3B-215ENST00000621029 E9PLD3 99 aa16.85■□□□□ 0.29
SEMA3B-215ENST00000621029 NPC2P61916 151 aa16.85■□□□□ 0.29
SEMA3B-215ENST00000621029 SPANXB1Q9NS25 103 aaPredicted RBP16.85■□□□□ 0.29
SEMA3B-215ENST00000621029 S100A7L2Q5SY68 101 aa16.84■□□□□ 0.29
SEMA3B-215ENST00000621029 RETNLBQ9BQ08 111 aa16.84■□□□□ 0.29
SEMA3B-215ENST00000621029 A0A0J9YXY3 114 aa16.83■□□□□ 0.28
SEMA3B-215ENST00000621029 KRTAP4-16G5E9R7 235 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-215ENST00000621029 PPDPFQ9H3Y8 114 aa16.82■□□□□ 0.28
SEMA3B-215ENST00000621029 NDUFC2O95298 119 aa16.79■□□□□ 0.28
SEMA3B-215ENST00000621029 ADAMTSL4-AS1Q5T5F5 129 aa16.79■□□□□ 0.28
SEMA3B-215ENST00000621029 B5MCH6 92 aa16.78■□□□□ 0.28
SEMA3B-215ENST00000621029 PET117Q6UWS5 81 aa16.78■□□□□ 0.28
SEMA3B-215ENST00000621029 LINC01545Q5VT33 79 aa16.77■□□□□ 0.28
SEMA3B-215ENST00000621029 C4orf48Q5BLP8 95 aa16.76■□□□□ 0.27
SEMA3B-215ENST00000621029 SOSTDC1Q6X4U4 206 aa16.76■□□□□ 0.27
SEMA3B-215ENST00000621029 GAGE2AQ6NT46 116 aa16.74■□□□□ 0.27
SEMA3B-215ENST00000621029 EIF4EBP3O60516 100 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-215ENST00000621029 IGLV6-57P01721 117 aa16.73■□□□□ 0.27
SEMA3B-215ENST00000621029 SPAG11AQ6PDA7 123 aa16.73■□□□□ 0.27
SEMA3B-215ENST00000621029 TRAV23DV6A0A075B6W5 121 aa16.72■□□□□ 0.27
SEMA3B-215ENST00000621029 CTAG1AP78358 180 aa16.72■□□□□ 0.27
SEMA3B-215ENST00000621029 KRTDAPP60985 99 aa16.71■□□□□ 0.27
SEMA3B-215ENST00000621029 ERC2-IT1O76042 136 aa16.7■□□□□ 0.26
SEMA3B-215ENST00000621029 C3orf79P0CE67 100 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms